RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 LHX9Q9NQ69 397 aa2.27□□□□□ -2.05
CD46-213ENST00000471987 CISHQ9NSE2 258 aa2.27□□□□□ -2.05
CD46-213ENST00000471987 LYRM2Q9NU23 88 aaPredicted RBP2.27□□□□□ -2.05
CD46-213ENST00000471987 MED9Q9NWA0 146 aa2.27□□□□□ -2.05
CD46-213ENST00000471987 ERG28Q9UKR5 140 aa2.27□□□□□ -2.05
CD46-213ENST00000471987 TRAPPC2LQ9UL33 140 aa2.27□□□□□ -2.05
CD46-213ENST00000471987 MCTS1Q9ULC4 181 aaKnown RBP2.27□□□□□ -2.05
CD46-213ENST00000471987 KLF12Q9Y4X4 402 aa2.27□□□□□ -2.05
CD46-213ENST00000471987 TMEM131LA2VDJ0 1609 aa2.27□□□□□ -2.05
CD46-213ENST00000471987 LRP5O75197 1615 aa2.27□□□□□ -2.05
CD46-213ENST00000471987 TNRC18O15417 2968 aaPredicted RBP2.27□□□□□ -2.05
CD46-213ENST00000471987 ADGRL2O95490 1459 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 DAPK1P53355 1430 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 STRCQ7RTU9 1775 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 KTN1Q86UP2 1357 aaKnown RBP2.26□□□□□ -2.05
CD46-213ENST00000471987 IGLV2-18A0A075B6J9 118 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 TRAV36DV7A0A075B6V5 113 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 TRAV30A0A087WSZ9 112 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 A0A087WUU8 490 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 IGHV2OR16-5A0A0B4J2B6 119 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 A0A0U1RQV1 116 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 A0A1B0GV50 99 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 NME4O00746 187 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 FKBP6O75344 327 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 C6orf47O95873 294 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 IGHV2-5P01817 119 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 HBZP02008 142 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 TTRP02766 147 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 SMIM17P0DL12 118 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 FGF7P21781 194 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 NPY1RP25929 384 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 OR12D2P58182 307 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 TAS2R30P59541 319 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 CDK6Q00534 326 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 PLCXD2Q0VAA5 305 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 IHHQ14623 411 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 RHEBQ15382 184 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 TMEM52BQ4KMG9 183 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 MORN2Q502X0 79 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 NCMAPQ5T1S8 102 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 SLC25A34Q6PIV7 304 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 EPGNQ6UW88 154 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 PNKDQ8N490 385 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 COX18Q8N8Q8 333 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 OR52L1Q8NGH7 329 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 OR5A1Q8NGJ0 315 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 OR51A2Q8NGJ7 313 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 ZNF675Q8TD23 568 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 TMEM159Q96B96 161 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 PPCDCQ96CD2 204 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 SMIM8Q96KF7 97 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 SLC35G5Q96KT7 338 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 HSFY1Q96LI6 401 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 ZNF649Q9BS31 505 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 SUCNR1Q9BXA5 334 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 IFI27L2Q9H2X8 130 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 VSIRQ9H7M9 311 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 GPR84Q9NQS5 396 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 MRPL16Q9NX20 251 aaKnown RBP2.26□□□□□ -2.05
CD46-213ENST00000471987 MED11Q9P086 117 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 ZNF230Q9UIE0 474 aaPredicted RBP2.26□□□□□ -2.05
CD46-213ENST00000471987 PRNDQ9UKY0 176 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 RAB22AQ9UL26 194 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 SNX12Q9UMY4 172 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.26□□□□□ -2.05
CD46-213ENST00000471987 OR51B2Q9Y5P1 312 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 ZNF780BQ9Y6R6 833 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 V9GYS6 101 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 OTOFQ9HC10 1997 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 ADAMTS12P58397 1594 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 ZFYVE16Q7Z3T8 1539 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 KDM5DQ9BY66 1539 aa2.26□□□□□ -2.05
CD46-213ENST00000471987 SCAF11Q99590 1463 aaKnown RBP2.26□□□□□ -2.05
CD46-213ENST00000471987 N4BP2Q86UW6 1770 aaPredicted RBP2.26□□□□□ -2.05
CD46-213ENST00000471987 NAIPQ13075 1403 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 PLXND1Q9Y4D7 1925 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 TRAV39A0A0B4J263 110 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 TRAV38-1A0A0B4J264 116 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 CIB4A0PJX0 185 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 TMEM218A2RU14 115 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 C11orf94C9JXX5 98 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 D6RAR5 112 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 INMT-MINDY4F8WBC2 141 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 SMKR1H3BMG3 65 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 H3BMQ9 156 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 DNASE2O00115 360 aaPredicted RBP2.25□□□□□ -2.05
CD46-213ENST00000471987 RBFOX2O43251 390 aaKnown RBP eCLIP2.25□□□□□ -2.051e-6■■■□□ 17.2
CD46-213ENST00000471987 GNG7O60262 68 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 OR7C2O60412 319 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 CDRT1O95170 752 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 NRASP01111 189 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 OPN1SWP03999 348 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 LGALS2P05162 132 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 PFN1P07737 140 aaKnown RBP2.25□□□□□ -2.05
CD46-213ENST00000471987 IL3P08700 152 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 ZNF14P17017 642 aaPredicted RBP2.25□□□□□ -2.05
CD46-213ENST00000471987 ORM2P19652 201 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 EVI2AP22794 236 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 KDELR1P24390 212 aa2.25□□□□□ -2.05
CD46-213ENST00000471987 SRIP30626 198 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms