RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 DRAXINQ8NBI3 349 aaPredicted RBP12.35□□□□□ -0.43
HDAC6-218ENST00000470942 ZFP57Q9NU63 452 aa12.35□□□□□ -0.43
HDAC6-218ENST00000470942 TRBV6-7A0A0A0MS04 114 aa12.34□□□□□ -0.43
HDAC6-218ENST00000470942 H0YJW9 148 aa12.34□□□□□ -0.43
HDAC6-218ENST00000470942 SCGNO76038 276 aa12.34□□□□□ -0.43
HDAC6-218ENST00000470942 PLGLAQ15195 96 aa12.34□□□□□ -0.43
HDAC6-218ENST00000470942 C5orf64Q2M2E5 130 aa12.34□□□□□ -0.43
HDAC6-218ENST00000470942 BEAN1Q3B7T3 259 aa12.34□□□□□ -0.43
HDAC6-218ENST00000470942 TIMM50Q3ZCQ8 353 aa12.34□□□□□ -0.43
HDAC6-218ENST00000470942 CXorf66Q5JRM2 361 aaPredicted RBP12.34□□□□□ -0.43
HDAC6-218ENST00000470942 LIN54Q6MZP7 749 aa12.34□□□□□ -0.43
HDAC6-218ENST00000470942 NPBQ8NG41 125 aa12.34□□□□□ -0.43
HDAC6-218ENST00000470942 GINS4Q9BRT9 223 aa12.34□□□□□ -0.43
HDAC6-218ENST00000470942 CABLES2Q9BTV7 478 aa12.34□□□□□ -0.43
HDAC6-218ENST00000470942 TOLLIPQ9H0E2 274 aa12.34□□□□□ -0.43
HDAC6-218ENST00000470942 RHBDL2Q9NX52 303 aa12.34□□□□□ -0.43
HDAC6-218ENST00000470942 WASHC3Q9Y3C0 194 aa12.34□□□□□ -0.43
HDAC6-218ENST00000470942 RBM7Q9Y580 266 aaKnown RBP12.34□□□□□ -0.43
HDAC6-218ENST00000470942 M0R1X1 148 aa12.33□□□□□ -0.44
HDAC6-218ENST00000470942 PROP1O75360 226 aa12.33□□□□□ -0.44
HDAC6-218ENST00000470942 HLA-DRB1P01911 266 aa12.33□□□□□ -0.44
HDAC6-218ENST00000470942 TFAP2AP05549 437 aa12.33□□□□□ -0.44
HDAC6-218ENST00000470942 OR8U9P0C7N5 309 aa12.33□□□□□ -0.44
HDAC6-218ENST00000470942 SRSF7Q16629 238 aaKnown RBP eCLIP12.33□□□□□ -0.441e-6■■■□□ 17.2
HDAC6-218ENST00000470942 HACD4Q5VWC8 232 aa12.33□□□□□ -0.44
HDAC6-218ENST00000470942 LCNL1Q6ZST4 164 aa12.33□□□□□ -0.44
HDAC6-218ENST00000470942 C18orf65Q6ZTR6 163 aa12.33□□□□□ -0.44
HDAC6-218ENST00000470942 C8orf86Q6ZUL3 223 aa12.33□□□□□ -0.44
HDAC6-218ENST00000470942 KLHL30-AS1Q8NEE0 82 aa12.33□□□□□ -0.44
HDAC6-218ENST00000470942 OR5AN1Q8NGI8 311 aa12.33□□□□□ -0.44
HDAC6-218ENST00000470942 OR5H6Q8NGV6 325 aa12.33□□□□□ -0.44
HDAC6-218ENST00000470942 OR8U1Q8NH10 309 aa12.33□□□□□ -0.44
HDAC6-218ENST00000470942 ST6GALNAC5Q9BVH7 336 aa12.33□□□□□ -0.44
HDAC6-218ENST00000470942 OR2D2Q9H210 308 aa12.33□□□□□ -0.44
HDAC6-218ENST00000470942 OR51J1Q9H342 316 aa12.33□□□□□ -0.44
HDAC6-218ENST00000470942 FBXL15Q9H469 300 aa12.33□□□□□ -0.44
HDAC6-218ENST00000470942 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.33□□□□□ -0.44
HDAC6-218ENST00000470942 PARP11Q9NR21 331 aa12.33□□□□□ -0.44
HDAC6-218ENST00000470942 TGP01266 2768 aa12.32□□□□□ -0.44
HDAC6-218ENST00000470942 IGKV1D-8A0A087WSZ0 117 aa12.32□□□□□ -0.44
HDAC6-218ENST00000470942 TMEM235A6NFC5 223 aa12.32□□□□□ -0.44
HDAC6-218ENST00000470942 RRHO14718 337 aa12.32□□□□□ -0.44
HDAC6-218ENST00000470942 AIREO43918 545 aa12.32□□□□□ -0.44
HDAC6-218ENST00000470942 RBBP9O75884 186 aa12.32□□□□□ -0.44
HDAC6-218ENST00000470942 NDUFA3O95167 84 aa12.32□□□□□ -0.44
HDAC6-218ENST00000470942 DIRAS3O95661 229 aa12.32□□□□□ -0.44
HDAC6-218ENST00000470942 APOA2P02652 100 aa12.32□□□□□ -0.44
HDAC6-218ENST00000470942 IGF1P05019 195 aa12.32□□□□□ -0.44
HDAC6-218ENST00000470942 RPLP1P05386 114 aaKnown RBP12.32□□□□□ -0.44
HDAC6-218ENST00000470942 ELANEP08246 267 aa12.32□□□□□ -0.44
HDAC6-218ENST00000470942 IGLL1P15814 213 aa12.32□□□□□ -0.44
HDAC6-218ENST00000470942 DTYMKP23919 212 aa12.32□□□□□ -0.44
HDAC6-218ENST00000470942 LINC00205P59089 165 aa12.32□□□□□ -0.44
HDAC6-218ENST00000470942 GNG2P59768 71 aa12.32□□□□□ -0.44
HDAC6-218ENST00000470942 RPS16P62249 146 aaKnown RBP12.32□□□□□ -0.44
HDAC6-218ENST00000470942 LSM3P62310 102 aaKnown RBP12.32□□□□□ -0.44
HDAC6-218ENST00000470942 FOXE3Q13461 319 aa12.32□□□□□ -0.44
HDAC6-218ENST00000470942 Q6ZS49 121 aa12.32□□□□□ -0.44
HDAC6-218ENST00000470942 ZNF383Q8NA42 475 aa12.32□□□□□ -0.44
HDAC6-218ENST00000470942 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.32□□□□□ -0.44
HDAC6-218ENST00000470942 WFDC9Q8NEX5 89 aa12.32□□□□□ -0.44
HDAC6-218ENST00000470942 NUDCD2Q8WVJ2 157 aa12.32□□□□□ -0.44
HDAC6-218ENST00000470942 ETV7Q9Y603 341 aa12.32□□□□□ -0.44
HDAC6-218ENST00000470942 WSB1Q9Y6I7 421 aa12.32□□□□□ -0.44
HDAC6-218ENST00000470942 IGHV7-81A0A0B4J1V7 117 aa12.31□□□□□ -0.44
HDAC6-218ENST00000470942 ATP6V0E1O15342 81 aa12.31□□□□□ -0.44
HDAC6-218ENST00000470942 OR5H8P0DN80 308 aa12.31□□□□□ -0.44
HDAC6-218ENST00000470942 TGFBR1P36897 503 aa12.31□□□□□ -0.44
HDAC6-218ENST00000470942 SCAND1P57086 179 aa12.31□□□□□ -0.44
HDAC6-218ENST00000470942 PITPNAQ00169 270 aa12.31□□□□□ -0.44
HDAC6-218ENST00000470942 ZNF260Q3ZCT1 412 aa12.31□□□□□ -0.44
HDAC6-218ENST00000470942 ZNF695Q8IW36 515 aa12.31□□□□□ -0.44
HDAC6-218ENST00000470942 YIPF6Q96EC8 236 aa12.31□□□□□ -0.44
HDAC6-218ENST00000470942 RNF5Q99942 180 aa12.31□□□□□ -0.44
HDAC6-218ENST00000470942 TRAV18A0A075B6X5 111 aa12.3□□□□□ -0.44
HDAC6-218ENST00000470942 G3V318 75 aa12.3□□□□□ -0.44
HDAC6-218ENST00000470942 J3QRK9 145 aa12.3□□□□□ -0.44
HDAC6-218ENST00000470942 IGHG4P01861 327 aa12.3□□□□□ -0.44
HDAC6-218ENST00000470942 PRB2P02812 416 aaPredicted RBP12.3□□□□□ -0.44
HDAC6-218ENST00000470942 SLC6A1P30531 599 aa12.3□□□□□ -0.44
HDAC6-218ENST00000470942 THBS3P49746 956 aa12.3□□□□□ -0.44
HDAC6-218ENST00000470942 CFHR3Q02985 330 aa12.3□□□□□ -0.44
HDAC6-218ENST00000470942 KPRPQ5T749 579 aaPredicted RBP12.3□□□□□ -0.44
HDAC6-218ENST00000470942 PDPNQ86YL7 162 aa12.3□□□□□ -0.44
HDAC6-218ENST00000470942 H1FOOQ8IZA3 346 aaPredicted RBP12.3□□□□□ -0.44
HDAC6-218ENST00000470942 ABHD5Q8WTS1 349 aa12.3□□□□□ -0.44
HDAC6-218ENST00000470942 FLYWCH2Q96CP2 140 aaKnown RBP12.3□□□□□ -0.44
HDAC6-218ENST00000470942 SLC25A38Q96DW6 304 aa12.3□□□□□ -0.44
HDAC6-218ENST00000470942 CLCC1Q96S66 551 aa12.3□□□□□ -0.44
HDAC6-218ENST00000470942 TSNAXQ99598 290 aaKnown RBP12.3□□□□□ -0.44
HDAC6-218ENST00000470942 DCSTAMPQ9H295 470 aa12.3□□□□□ -0.44
HDAC6-218ENST00000470942 SLC35D1Q9NTN3 355 aa12.3□□□□□ -0.44
HDAC6-218ENST00000470942 SDHAF2Q9NX18 166 aa12.3□□□□□ -0.44
HDAC6-218ENST00000470942 METTL1Q9UBP6 276 aaKnown RBP12.3□□□□□ -0.44
HDAC6-218ENST00000470942 ZNF580Q9UK33 172 aa12.3□□□□□ -0.44
HDAC6-218ENST00000470942 GAB2Q9UQC2 676 aa12.3□□□□□ -0.44
HDAC6-218ENST00000470942 TRAV41A0A0B4J266 112 aa12.29□□□□□ -0.44
HDAC6-218ENST00000470942 FCN1O00602 326 aa12.29□□□□□ -0.44
HDAC6-218ENST00000470942 IGKV1-16P04430 117 aa12.29□□□□□ -0.44
HDAC6-218ENST00000470942 CTXN2P0C2S0 81 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 252.4 ms