RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 SERF1AO75920 110 aa6.76□□□□□ -1.33
TPM3-215ENST00000469717 UCP1P25874 307 aa6.76□□□□□ -1.33
TPM3-215ENST00000469717 ZXDAP98168 799 aa6.76□□□□□ -1.33
TPM3-215ENST00000469717 ACOT6Q3I5F7 207 aaPredicted RBP6.76□□□□□ -1.33
TPM3-215ENST00000469717 NABP1Q96AH0 204 aa6.76□□□□□ -1.33
TPM3-215ENST00000469717 DEFB126Q9BYW3 111 aa6.76□□□□□ -1.33
TPM3-215ENST00000469717 PSENENQ9NZ42 101 aa6.76□□□□□ -1.33
TPM3-215ENST00000469717 HS3ST3A1Q9Y663 406 aa6.76□□□□□ -1.33
TPM3-215ENST00000469717 PTPRQQ9UMZ3 2332 aa6.76□□□□□ -1.33
TPM3-215ENST00000469717 BLACEA4D250 179 aa6.76□□□□□ -1.33
TPM3-215ENST00000469717 RBFOX2O43251 390 aaKnown RBP eCLIP6.76□□□□□ -1.33
TPM3-215ENST00000469717 PGLYRP1O75594 196 aaPredicted RBP6.76□□□□□ -1.33
TPM3-215ENST00000469717 UMODP07911 640 aa6.76□□□□□ -1.33
TPM3-215ENST00000469717 WNT2P09544 360 aa6.76□□□□□ -1.33
TPM3-215ENST00000469717 TCN2P20062 427 aa6.76□□□□□ -1.33
TPM3-215ENST00000469717 GCSAMLQ5JQS6 135 aa6.76□□□□□ -1.33
TPM3-215ENST00000469717 ZNF709Q8N972 641 aa6.76□□□□□ -1.33
TPM3-215ENST00000469717 GJC3Q8NFK1 279 aa6.76□□□□□ -1.33
TPM3-215ENST00000469717 CMTM2Q8TAZ6 248 aa6.76□□□□□ -1.33
TPM3-215ENST00000469717 TXN2Q99757 166 aa6.76□□□□□ -1.33
TPM3-215ENST00000469717 DUSP23Q9BVJ7 150 aa6.76□□□□□ -1.33
TPM3-215ENST00000469717 PRRG4Q9BZD6 226 aa6.76□□□□□ -1.33
TPM3-215ENST00000469717 TUBG2Q9NRH3 451 aa6.76□□□□□ -1.33
TPM3-215ENST00000469717 TP73-AS1Q9UF72 201 aa6.76□□□□□ -1.33
TPM3-215ENST00000469717 INTS1Q8N201 2190 aaKnown RBP6.76□□□□□ -1.33
TPM3-215ENST00000469717 PCNX2A6NKB5 2137 aa6.76□□□□□ -1.33
TPM3-215ENST00000469717 NRASP01111 189 aa6.76□□□□□ -1.33
TPM3-215ENST00000469717 STAG3L3P0CL85 134 aa6.76□□□□□ -1.33
TPM3-215ENST00000469717 RBM11P57052 281 aaKnown RBP6.76□□□□□ -1.33
TPM3-215ENST00000469717 RNF151Q2KHN1 245 aa6.76□□□□□ -1.33
TPM3-215ENST00000469717 AGBL5Q8NDL9 886 aa6.76□□□□□ -1.33
TPM3-215ENST00000469717 IL1F10Q8WWZ1 152 aa6.76□□□□□ -1.33
TPM3-215ENST00000469717 CORO2AQ92828 525 aa6.76□□□□□ -1.33
TPM3-215ENST00000469717 P2RX4Q99571 388 aa6.76□□□□□ -1.33
TPM3-215ENST00000469717 KIAA1549Q9HCM3 1950 aa6.76□□□□□ -1.33
TPM3-215ENST00000469717 ATRXP46100 2492 aa6.76□□□□□ -1.33
TPM3-215ENST00000469717 J3QW42 95 aa6.75□□□□□ -1.33
TPM3-215ENST00000469717 TNFSF13O75888 250 aa6.75□□□□□ -1.33
TPM3-215ENST00000469717 GUCA1AP43080 201 aaPredicted RBP6.75□□□□□ -1.33
TPM3-215ENST00000469717 ATP5G3P48201 142 aa6.75□□□□□ -1.33
TPM3-215ENST00000469717 COMPP49747 757 aaPredicted RBP6.75□□□□□ -1.33
TPM3-215ENST00000469717 HIST1H3AP68431 136 aa6.75□□□□□ -1.33
TPM3-215ENST00000469717 HIST3H3Q16695 136 aa6.75□□□□□ -1.33
TPM3-215ENST00000469717 SPINK9Q5DT21 86 aa6.75□□□□□ -1.33
TPM3-215ENST00000469717 PLCXD3Q63HM9 321 aa6.75□□□□□ -1.33
TPM3-215ENST00000469717 NUFIP2Q7Z417 695 aaKnown RBP6.75□□□□□ -1.33
TPM3-215ENST00000469717 ATOH7Q8N100 152 aa6.75□□□□□ -1.33
TPM3-215ENST00000469717 ZNF611Q8N823 705 aa6.75□□□□□ -1.33
TPM3-215ENST00000469717 FGFBP3Q8TAT2 258 aa6.75□□□□□ -1.33
TPM3-215ENST00000469717 VAMP8Q9BV40 100 aa6.75□□□□□ -1.33
TPM3-215ENST00000469717 SPAARA0A1B0GVQ0 90 aa6.75□□□□□ -1.33
TPM3-215ENST00000469717 SERTM2A0A1B0GWG4 89 aa6.75□□□□□ -1.33
TPM3-215ENST00000469717 SHBQ15464 509 aa6.75□□□□□ -1.33
TPM3-215ENST00000469717 LRRC75BQ2VPJ9 315 aa6.75□□□□□ -1.33
TPM3-215ENST00000469717 Q5PR19 223 aa6.75□□□□□ -1.33
TPM3-215ENST00000469717 CENPVQ7Z7K6 275 aaPredicted RBP6.75□□□□□ -1.33
TPM3-215ENST00000469717 CISD2Q8N5K1 135 aaKnown RBP6.75□□□□□ -1.33
TPM3-215ENST00000469717 SGMS2Q8NHU3 365 aa6.75□□□□□ -1.33
TPM3-215ENST00000469717 WDR61Q9GZS3 305 aaKnown RBP6.75□□□□□ -1.33
TPM3-215ENST00000469717 METTL7AQ9H8H3 244 aa6.75□□□□□ -1.33
TPM3-215ENST00000469717 LNP1A1A4G5 178 aa6.75□□□□□ -1.33
TPM3-215ENST00000469717 SYNGR2O43760 224 aa6.75□□□□□ -1.33
TPM3-215ENST00000469717 SPINK4O60575 86 aa6.75□□□□□ -1.33
TPM3-215ENST00000469717 BCL3P20749 454 aa6.75□□□□□ -1.33
TPM3-215ENST00000469717 KRTDAPP60985 99 aa6.75□□□□□ -1.33
TPM3-215ENST00000469717 TFF3Q07654 80 aa6.75□□□□□ -1.33
TPM3-215ENST00000469717 FFAR4Q5NUL3 377 aa6.75□□□□□ -1.33
TPM3-215ENST00000469717 UNQ5815/PRO19632Q6UWF5 114 aa6.75□□□□□ -1.33
TPM3-215ENST00000469717 GCNT2Q8N0V5 402 aa6.75□□□□□ -1.33
TPM3-215ENST00000469717 CADM4Q8NFZ8 388 aa6.75□□□□□ -1.33
TPM3-215ENST00000469717 OR2M3Q8NG83 312 aa6.75□□□□□ -1.33
TPM3-215ENST00000469717 TAF15Q92804 592 aaKnown RBP eCLIP6.75□□□□□ -1.33
TPM3-215ENST00000469717 ZNF488Q96MN9 340 aa6.75□□□□□ -1.33
TPM3-215ENST00000469717 OXGR1Q96P68 337 aa6.75□□□□□ -1.33
TPM3-215ENST00000469717 CIB3Q96Q77 187 aaPredicted RBP6.75□□□□□ -1.33
TPM3-215ENST00000469717 HIPK2Q9H2X6 1198 aa6.75□□□□□ -1.33
TPM3-215ENST00000469717 PPP1R3CQ9UQK1 317 aa6.75□□□□□ -1.33
TPM3-215ENST00000469717 PXMP4Q9Y6I8 212 aa6.75□□□□□ -1.33
TPM3-215ENST00000469717 MED13LQ71F56 2210 aa6.75□□□□□ -1.33
TPM3-215ENST00000469717 ZFYVE26Q68DK2 2539 aa6.75□□□□□ -1.33
TPM3-215ENST00000469717 OTOGLQ3ZCN5 2332 aa6.75□□□□□ -1.33
TPM3-215ENST00000469717 TRBV20OR9-2A0A075B6H5 130 aa6.74□□□□□ -1.33
TPM3-215ENST00000469717 TRBV11-1A0A0K0K1C0 115 aa6.74□□□□□ -1.33
TPM3-215ENST00000469717 LMO7DNF2Z398 122 aa6.74□□□□□ -1.33
TPM3-215ENST00000469717 SLC25A17O43808 307 aa6.74□□□□□ -1.33
TPM3-215ENST00000469717 IGKV1-5P01602 117 aa6.74□□□□□ -1.33
TPM3-215ENST00000469717 SERPINE2P07093 398 aa6.74□□□□□ -1.33
TPM3-215ENST00000469717 F2RP25116 425 aa6.74□□□□□ -1.33
TPM3-215ENST00000469717 OTX1P32242 354 aaPredicted RBP6.74□□□□□ -1.33
TPM3-215ENST00000469717 NTF4P34130 210 aa6.74□□□□□ -1.33
TPM3-215ENST00000469717 PSMB3P49720 205 aa6.74□□□□□ -1.33
TPM3-215ENST00000469717 SRPXP78539 464 aa6.74□□□□□ -1.33
TPM3-215ENST00000469717 TGFBR3Q03167 851 aa6.74□□□□□ -1.33
TPM3-215ENST00000469717 TEX43Q6ZNM6 134 aa6.74□□□□□ -1.33
TPM3-215ENST00000469717 LINC00696Q6ZRV3 163 aa6.74□□□□□ -1.33
TPM3-215ENST00000469717 REPIN1Q9BWE0 567 aaKnown RBP6.74□□□□□ -1.33
TPM3-215ENST00000469717 FBXL7Q9UJT9 491 aa6.74□□□□□ -1.33
TPM3-215ENST00000469717 MED12LQ86YW9 2145 aa6.74□□□□□ -1.33
TPM3-215ENST00000469717 CLEC18AA5D8T8 446 aa6.74□□□□□ -1.33
TPM3-215ENST00000469717 SIRPB1O00241 398 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms