RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 FAM120AOSQ5T036 256 aa6.61□□□□□ -1.35
HDAC6-216ENST00000468949 AADACL3Q5VUY0 350 aa6.61□□□□□ -1.35
HDAC6-216ENST00000468949 RUSC1-AS1Q66K80 236 aa6.61□□□□□ -1.35
HDAC6-216ENST00000468949 FAM71F2Q6NXP2 309 aa6.61□□□□□ -1.35
HDAC6-216ENST00000468949 PLET1Q6UQ28 207 aa6.61□□□□□ -1.35
HDAC6-216ENST00000468949 DHRS11Q6UWP2 260 aa6.61□□□□□ -1.35
HDAC6-216ENST00000468949 BRD3OSQ6XYD6 125 aa6.61□□□□□ -1.35
HDAC6-216ENST00000468949 TMED4Q7Z7H5 227 aa6.61□□□□□ -1.35
HDAC6-216ENST00000468949 C11orf42Q8N5U0 333 aa6.61□□□□□ -1.35
HDAC6-216ENST00000468949 LINC00311Q8N616 119 aa6.61□□□□□ -1.35
HDAC6-216ENST00000468949 ZBTB34Q8NCN2 500 aa6.61□□□□□ -1.35
HDAC6-216ENST00000468949 ZNF439Q8NDP4 499 aa6.61□□□□□ -1.35
HDAC6-216ENST00000468949 OR4P4Q8NGL7 312 aa6.61□□□□□ -1.35
HDAC6-216ENST00000468949 CT45A3Q8NHU0 189 aa6.61□□□□□ -1.35
HDAC6-216ENST00000468949 MARCH1Q8TCQ1 289 aa6.61□□□□□ -1.35
HDAC6-216ENST00000468949 TCTEX1D2Q8WW35 142 aa6.61□□□□□ -1.35
HDAC6-216ENST00000468949 ZNF486Q96H40 463 aaPredicted RBP6.61□□□□□ -1.35
HDAC6-216ENST00000468949 ABHD14BQ96IU4 210 aa6.61□□□□□ -1.35
HDAC6-216ENST00000468949 BEX2Q9BXY8 128 aa6.61□□□□□ -1.35
HDAC6-216ENST00000468949 TOLLIPQ9H0E2 274 aa6.61□□□□□ -1.35
HDAC6-216ENST00000468949 PARP12Q9H0J9 701 aaKnown RBP6.61□□□□□ -1.35
HDAC6-216ENST00000468949 IFI27L2Q9H2X8 130 aa6.61□□□□□ -1.35
HDAC6-216ENST00000468949 CDC42EP3Q9UKI2 254 aa6.61□□□□□ -1.35
HDAC6-216ENST00000468949 PRELID3BQ9Y3B1 194 aa6.61□□□□□ -1.35
HDAC6-216ENST00000468949 HILPDAQ9Y5L2 63 aa6.61□□□□□ -1.35
HDAC6-216ENST00000468949 HIVEP2P31629 2446 aa6.61□□□□□ -1.35
HDAC6-216ENST00000468949 FN1P02751 2386 aaKnown RBP6.6□□□□□ -1.35
HDAC6-216ENST00000468949 IGKV1D-13A0A0B4J2D9 117 aa6.6□□□□□ -1.35
HDAC6-216ENST00000468949 TEX13DA0A0J9YY54 714 aaPredicted RBP6.6□□□□□ -1.35
HDAC6-216ENST00000468949 OR5H14A6NHG9 310 aa6.6□□□□□ -1.35
HDAC6-216ENST00000468949 OOSP1A8MZH6 123 aa6.6□□□□□ -1.35
HDAC6-216ENST00000468949 TNFSF12O43508 249 aa6.6□□□□□ -1.35
HDAC6-216ENST00000468949 PTTG1O95997 202 aa6.6□□□□□ -1.35
HDAC6-216ENST00000468949 GAPDHP04406 335 aaKnown RBP6.6□□□□□ -1.35
HDAC6-216ENST00000468949 IGHV4-38-2P0DP08 117 aa6.6□□□□□ -1.35
HDAC6-216ENST00000468949 IGKV1-13P0DP09 117 aa6.6□□□□□ -1.35
HDAC6-216ENST00000468949 SRD5A1P18405 259 aa6.6□□□□□ -1.35
HDAC6-216ENST00000468949 REG1BP48304 166 aa6.6□□□□□ -1.35
HDAC6-216ENST00000468949 RAB13P51153 203 aa6.6□□□□□ -1.35
HDAC6-216ENST00000468949 CCR6P51684 374 aa6.6□□□□□ -1.35
HDAC6-216ENST00000468949 UCP3P55916 312 aa6.6□□□□□ -1.35
HDAC6-216ENST00000468949 TAS2R31P59538 309 aa6.6□□□□□ -1.35
HDAC6-216ENST00000468949 MSMO1Q15800 293 aa6.6□□□□□ -1.35
HDAC6-216ENST00000468949 SSX2Q16385 188 aa6.6□□□□□ -1.35
HDAC6-216ENST00000468949 RTL8BQ17RB0 113 aa6.6□□□□□ -1.35
HDAC6-216ENST00000468949 PHLDA2Q53GA4 152 aa6.6□□□□□ -1.35
HDAC6-216ENST00000468949 RPL39P5Q59GN2 51 aa6.6□□□□□ -1.35
HDAC6-216ENST00000468949 TPTE2P1Q5T6R2 138 aa6.6□□□□□ -1.35
HDAC6-216ENST00000468949 FAM53AQ6NSI3 398 aaPredicted RBP6.6□□□□□ -1.35
HDAC6-216ENST00000468949 RBMS3Q6XE24 437 aaKnown RBP6.6□□□□□ -1.35
HDAC6-216ENST00000468949 IL17RELQ6ZVW7 336 aa6.6□□□□□ -1.35
HDAC6-216ENST00000468949 KCTD9Q7L273 389 aa6.6□□□□□ -1.35
HDAC6-216ENST00000468949 MOB3BQ86TA1 216 aa6.6□□□□□ -1.35
HDAC6-216ENST00000468949 OR8H3Q8N146 312 aa6.6□□□□□ -1.35
HDAC6-216ENST00000468949 CENPSQ8N2Z9 138 aa6.6□□□□□ -1.35
HDAC6-216ENST00000468949 ZDHHC22Q8N966 263 aa6.6□□□□□ -1.35
HDAC6-216ENST00000468949 OR13C8Q8NGS7 320 aa6.6□□□□□ -1.35
HDAC6-216ENST00000468949 ADTRPQ96IZ2 230 aa6.6□□□□□ -1.35
HDAC6-216ENST00000468949 AKR1E2Q96JD6 320 aa6.6□□□□□ -1.35
HDAC6-216ENST00000468949 CITED4Q96RK1 184 aa6.6□□□□□ -1.35
HDAC6-216ENST00000468949 HSD17B10Q99714 261 aaKnown RBP6.6□□□□□ -1.35
HDAC6-216ENST00000468949 C20orf85Q9H1P6 137 aa6.6□□□□□ -1.35
HDAC6-216ENST00000468949 LIN7CQ9NUP9 197 aaKnown RBP6.6□□□□□ -1.35
HDAC6-216ENST00000468949 NUDT15Q9NV35 164 aa6.6□□□□□ -1.35
HDAC6-216ENST00000468949 TMEM160Q9NX00 188 aa6.6□□□□□ -1.35
HDAC6-216ENST00000468949 ZNRD1Q9P1U0 126 aa6.6□□□□□ -1.35
HDAC6-216ENST00000468949 TBC1D24Q9ULP9 559 aa6.6□□□□□ -1.35
HDAC6-216ENST00000468949 DOCK11Q5JSL3 2073 aa6.59□□□□□ -1.35
HDAC6-216ENST00000468949 H7C2Y5 167 aa6.59□□□□□ -1.35
HDAC6-216ENST00000468949 ARPC1BO15143 372 aaKnown RBP6.59□□□□□ -1.35
HDAC6-216ENST00000468949 PLA2G10O15496 165 aa6.59□□□□□ -1.35
HDAC6-216ENST00000468949 NDUFB6O95139 128 aa6.59□□□□□ -1.35
HDAC6-216ENST00000468949 IGLV1-47P01700 117 aa6.59□□□□□ -1.35
HDAC6-216ENST00000468949 CTSDP07339 412 aaPredicted RBP6.59□□□□□ -1.35
HDAC6-216ENST00000468949 ZNF735P0CB33 412 aa6.59□□□□□ -1.35
HDAC6-216ENST00000468949 ANXA3P12429 323 aa6.59□□□□□ -1.35
HDAC6-216ENST00000468949 PI3P19957 117 aa6.59□□□□□ -1.35
HDAC6-216ENST00000468949 CD33P20138 364 aa6.59□□□□□ -1.35
HDAC6-216ENST00000468949 BRS3P32247 399 aa6.59□□□□□ -1.35
HDAC6-216ENST00000468949 KIR2DS2P43631 304 aa6.59□□□□□ -1.35
HDAC6-216ENST00000468949 THBS3P49746 956 aa6.59□□□□□ -1.35
HDAC6-216ENST00000468949 ZNF134P52741 427 aa6.59□□□□□ -1.35
HDAC6-216ENST00000468949 PIGPP57054 158 aa6.59□□□□□ -1.35
HDAC6-216ENST00000468949 TNP2Q05952 138 aa6.59□□□□□ -1.35
HDAC6-216ENST00000468949 TRIM16LQ309B1 348 aa6.59□□□□□ -1.35
HDAC6-216ENST00000468949 ZNF660Q6AZW8 331 aaPredicted RBP6.59□□□□□ -1.35
HDAC6-216ENST00000468949 HCP5Q6MZN7 132 aa6.59□□□□□ -1.35
HDAC6-216ENST00000468949 ZNF66Q6ZN08 573 aa6.59□□□□□ -1.35
HDAC6-216ENST00000468949 ZNF818PQ6ZRF7 136 aa6.59□□□□□ -1.35
HDAC6-216ENST00000468949 LHFPL4Q7Z7J7 247 aa6.59□□□□□ -1.35
HDAC6-216ENST00000468949 LHFPL1Q86WI0 220 aa6.59□□□□□ -1.35
HDAC6-216ENST00000468949 SGPP2Q8IWX5 399 aa6.59□□□□□ -1.35
HDAC6-216ENST00000468949 DRAM1Q8N682 238 aa6.59□□□□□ -1.35
HDAC6-216ENST00000468949 OR51H1Q8NH63 302 aa6.59□□□□□ -1.35
HDAC6-216ENST00000468949 CAPSLQ8WWF8 208 aa6.59□□□□□ -1.35
HDAC6-216ENST00000468949 RTN4IP1Q8WWV3 396 aaPredicted RBP6.59□□□□□ -1.35
HDAC6-216ENST00000468949 MALSU1Q96EH3 234 aa6.59□□□□□ -1.35
HDAC6-216ENST00000468949 RSRP1Q9BUV0 290 aa6.59□□□□□ -1.35
HDAC6-216ENST00000468949 CCL28Q9NRJ3 127 aa6.59□□□□□ -1.35
HDAC6-216ENST00000468949 SLC2A9Q9NRM0 540 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms