RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 OBSCN-AS1Q96MR7 158 aa-0.67□□□□□ -2.52
SSB-208ENST00000468600 NKX6-2Q9C056 277 aaPredicted RBP-0.67□□□□□ -2.52
SSB-208ENST00000468600 TRABDQ9H4I3 376 aa-0.67□□□□□ -2.52
SSB-208ENST00000468600 IFNKQ9P0W0 207 aa-0.67□□□□□ -2.52
SSB-208ENST00000468600 ZFYVE26Q68DK2 2539 aa-0.67□□□□□ -2.52
SSB-208ENST00000468600 LOC110117498A0A087WWA1 95 aa-0.68□□□□□ -2.52
SSB-208ENST00000468600 A0A1W2PPM0 123 aa-0.68□□□□□ -2.52
SSB-208ENST00000468600 IGLV3-27P01718 113 aa-0.68□□□□□ -2.52
SSB-208ENST00000468600 IGF2RP11717 2491 aa-0.68□□□□□ -2.52
SSB-208ENST00000468600 OR1E2P47887 323 aa-0.68□□□□□ -2.52
SSB-208ENST00000468600 PSMB3P49720 205 aa-0.68□□□□□ -2.52
SSB-208ENST00000468600 TSPAN5P62079 268 aa-0.68□□□□□ -2.52
SSB-208ENST00000468600 SLC13A5Q86YT5 568 aaPredicted RBP-0.68□□□□□ -2.52
SSB-208ENST00000468600 C1orf158Q8N1D5 194 aa-0.68□□□□□ -2.52
SSB-208ENST00000468600 OR2AE1Q8NHA4 323 aa-0.68□□□□□ -2.52
SSB-208ENST00000468600 TMEM216Q9P0N5 145 aa-0.68□□□□□ -2.52
SSB-208ENST00000468600 LRP1Q07954 4544 aaKnown RBP-0.68□□□□□ -2.52
SSB-208ENST00000468600 STAB1Q9NY15 2570 aa-0.68□□□□□ -2.52
SSB-208ENST00000468600 TRBV6-7A0A0A0MS04 114 aa-0.69□□□□□ -2.52
SSB-208ENST00000468600 C19orf84I3L1E1 186 aa-0.69□□□□□ -2.52
SSB-208ENST00000468600 COCHO43405 550 aa-0.69□□□□□ -2.52
SSB-208ENST00000468600 KLRC4O43908 158 aa-0.69□□□□□ -2.52
SSB-208ENST00000468600 GALP22466 123 aa-0.69□□□□□ -2.52
SSB-208ENST00000468600 TUBG1P23258 451 aa-0.69□□□□□ -2.52
SSB-208ENST00000468600 GADD45AP24522 165 aa-0.69□□□□□ -2.52
SSB-208ENST00000468600 RUNX1Q01196 453 aa-0.69□□□□□ -2.52
SSB-208ENST00000468600 TBC1D28Q2M2D7 210 aa-0.69□□□□□ -2.52
SSB-208ENST00000468600 HNRNPA1L2Q32P51 320 aaKnown RBP-0.69□□□□□ -2.52
SSB-208ENST00000468600 GRINAQ7Z429 371 aa-0.69□□□□□ -2.52
SSB-208ENST00000468600 UMODL1-AS1Q8N2C9 162 aa-0.69□□□□□ -2.52
SSB-208ENST00000468600 TSKUQ8WUA8 353 aa-0.69□□□□□ -2.52
SSB-208ENST00000468600 CCDC127Q96BQ5 260 aa-0.69□□□□□ -2.52
SSB-208ENST00000468600 OR51E2Q9H255 320 aa-0.69□□□□□ -2.52
SSB-208ENST00000468600 BLZF1Q9H2G9 400 aa-0.69□□□□□ -2.52
SSB-208ENST00000468600 TUBG2Q9NRH3 451 aa-0.69□□□□□ -2.52
SSB-208ENST00000468600 SLC2A9Q9NRM0 540 aa-0.69□□□□□ -2.52
SSB-208ENST00000468600 DNAJC12Q9UKB3 198 aa-0.69□□□□□ -2.52
SSB-208ENST00000468600 TNRC6AQ8NDV7 1962 aaKnown RBP-0.69□□□□□ -2.52
SSB-208ENST00000468600 A0A087WX48 190 aa-0.7□□□□□ -2.52
SSB-208ENST00000468600 A0A0D9SEW6 157 aa-0.7□□□□□ -2.52
SSB-208ENST00000468600 AKR7A2O43488 359 aa-0.7□□□□□ -2.52
SSB-208ENST00000468600 ORC5O43913 435 aa-0.7□□□□□ -2.52
SSB-208ENST00000468600 STK16O75716 305 aa-0.7□□□□□ -2.52
SSB-208ENST00000468600 CDK14O94921 469 aa-0.7□□□□□ -2.52
SSB-208ENST00000468600 PSMG1O95456 288 aa-0.7□□□□□ -2.52
SSB-208ENST00000468600 ANXA8P13928 327 aa-0.7□□□□□ -2.52
SSB-208ENST00000468600 ORM2P19652 201 aa-0.7□□□□□ -2.52
SSB-208ENST00000468600 RPA3P35244 121 aaPredicted RBP-0.7□□□□□ -2.52
SSB-208ENST00000468600 TRMT12Q53H54 448 aaKnown RBP-0.7□□□□□ -2.52
SSB-208ENST00000468600 ANXA8L1Q5VT79 327 aa-0.7□□□□□ -2.52
SSB-208ENST00000468600 MTERF4Q7Z6M4 381 aaKnown RBP-0.7□□□□□ -2.52
SSB-208ENST00000468600 OR5K1Q8NHB7 308 aa-0.7□□□□□ -2.52
SSB-208ENST00000468600 ABHD14BQ96IU4 210 aa-0.7□□□□□ -2.52
SSB-208ENST00000468600 NABP2Q9BQ15 211 aa-0.7□□□□□ -2.52
SSB-208ENST00000468600 MAP1LC3CQ9BXW4 147 aa-0.7□□□□□ -2.52
SSB-208ENST00000468600 SYT4Q9H2B2 425 aa-0.7□□□□□ -2.52
SSB-208ENST00000468600 RRP15Q9Y3B9 282 aaKnown RBP-0.7□□□□□ -2.52
SSB-208ENST00000468600 SCAF11Q99590 1463 aaKnown RBP-0.7□□□□□ -2.52
SSB-208ENST00000468600 SETD5Q9C0A6 1442 aa-0.71□□□□□ -2.52
SSB-208ENST00000468600 NAV1Q8NEY1 1877 aa-0.71□□□□□ -2.52
SSB-208ENST00000468600 HIVEP3Q5T1R4 2406 aa-0.71□□□□□ -2.52
SSB-208ENST00000468600 TXNDC9O14530 226 aa-0.71□□□□□ -2.52
SSB-208ENST00000468600 UBE2L6O14933 153 aa-0.71□□□□□ -2.52
SSB-208ENST00000468600 ENSAO43768 121 aaKnown RBP-0.71□□□□□ -2.52
SSB-208ENST00000468600 CCR2P41597 374 aa-0.71□□□□□ -2.52
SSB-208ENST00000468600 LINC00313P59037 77 aa-0.71□□□□□ -2.52
SSB-208ENST00000468600 TRIP13Q15645 432 aaPredicted RBP-0.71□□□□□ -2.52
SSB-208ENST00000468600 FAHD1Q6P587 224 aa-0.71□□□□□ -2.52
SSB-208ENST00000468600 SCGB1D4Q6XE38 83 aa-0.71□□□□□ -2.52
SSB-208ENST00000468600 DOLPP1Q86YN1 238 aa-0.71□□□□□ -2.52
SSB-208ENST00000468600 TMEM75Q8N9X5 138 aa-0.71□□□□□ -2.52
SSB-208ENST00000468600 OR2D3Q8NGH3 330 aa-0.71□□□□□ -2.52
SSB-208ENST00000468600 OR51L1Q8NGJ5 315 aa-0.71□□□□□ -2.52
SSB-208ENST00000468600 CIB1Q99828 191 aa-0.71□□□□□ -2.52
SSB-208ENST00000468600 MED28Q9H204 178 aa-0.71□□□□□ -2.52
SSB-208ENST00000468600 TAAR3PQ9P1P4 343 aa-0.71□□□□□ -2.52
SSB-208ENST00000468600 TENM4Q6N022 2769 aa-0.71□□□□□ -2.52
SSB-208ENST00000468600 FAM208BQ5VWN6 2430 aa-0.72□□□□□ -2.52
SSB-208ENST00000468600 MGAT4DA6NG13 374 aa-0.72□□□□□ -2.52
SSB-208ENST00000468600 GOLGA6L10A6NI86 522 aa-0.72□□□□□ -2.52
SSB-208ENST00000468600 POLR3GO15318 223 aaPredicted RBP-0.72□□□□□ -2.52
SSB-208ENST00000468600 GIMD1P0DJR0 217 aa-0.72□□□□□ -2.52
SSB-208ENST00000468600 OR13C7P0DN81 318 aa-0.72□□□□□ -2.52
SSB-208ENST00000468600 PSMB8P28062 276 aa-0.72□□□□□ -2.52
SSB-208ENST00000468600 ACTBP60709 375 aa-0.72□□□□□ -2.52
SSB-208ENST00000468600 ACTG1P63261 375 aa-0.72□□□□□ -2.52
SSB-208ENST00000468600 HIKESHIQ53FT3 197 aa-0.72□□□□□ -2.52
SSB-208ENST00000468600 CENPWQ5EE01 88 aa-0.72□□□□□ -2.52
SSB-208ENST00000468600 TMEM31Q5JXX7 168 aa-0.72□□□□□ -2.52
SSB-208ENST00000468600 PIP5KL1Q5T9C9 394 aa-0.72□□□□□ -2.52
SSB-208ENST00000468600 MED12LQ86YW9 2145 aa-0.72□□□□□ -2.52
SSB-208ENST00000468600 SLC22A24Q8N4F4 322 aa-0.72□□□□□ -2.52
SSB-208ENST00000468600 RPS4Y2Q8TD47 263 aa-0.72□□□□□ -2.52
SSB-208ENST00000468600 PGLYRP3Q96LB9 341 aa-0.72□□□□□ -2.52
SSB-208ENST00000468600 COPS4Q9BT78 406 aa-0.72□□□□□ -2.52
SSB-208ENST00000468600 METTL8Q9H825 291 aaKnown RBP-0.72□□□□□ -2.52
SSB-208ENST00000468600 ANKHQ9HCJ1 492 aa-0.72□□□□□ -2.52
SSB-208ENST00000468600 NIT2Q9NQR4 276 aa-0.72□□□□□ -2.52
SSB-208ENST00000468600 LINC00527Q9UJ94 153 aa-0.72□□□□□ -2.52
SSB-208ENST00000468600 TIMM9Q9Y5J7 89 aa-0.72□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms