RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 ST8SIA5O15466 376 aa14.97□□□□□ -0.01
COL7A1-207ENST00000467985 HSPA12AO43301 675 aa14.97□□□□□ -0.01
COL7A1-207ENST00000467985 HLA-DRB1P01911 266 aa14.97□□□□□ -0.01
COL7A1-207ENST00000467985 RPLP1P05386 114 aaKnown RBP14.97□□□□□ -0.01
COL7A1-207ENST00000467985 SLC2A2P11168 524 aaPredicted RBP14.97□□□□□ -0.01
COL7A1-207ENST00000467985 MC5RP33032 325 aa14.97□□□□□ -0.01
COL7A1-207ENST00000467985 RORCP51449 518 aa14.97□□□□□ -0.01
COL7A1-207ENST00000467985 TMEM50BP56557 158 aa14.97□□□□□ -0.01
COL7A1-207ENST00000467985 HLA-DRB3P79483 266 aa14.97□□□□□ -0.01
COL7A1-207ENST00000467985 CFHR3Q02985 330 aa14.97□□□□□ -0.01
COL7A1-207ENST00000467985 C18orf65Q6ZTR6 163 aa14.97□□□□□ -0.01
COL7A1-207ENST00000467985 NR2C2APQ86WQ0 139 aa14.97□□□□□ -0.01
COL7A1-207ENST00000467985 OR8U1Q8NH10 309 aa14.97□□□□□ -0.01
COL7A1-207ENST00000467985 SLC25A46Q96AG3 418 aa14.97□□□□□ -0.01
COL7A1-207ENST00000467985 ARHGAP5-AS1Q96IT6 56 aa14.97□□□□□ -0.01
COL7A1-207ENST00000467985 P2RX4Q99571 388 aa14.97□□□□□ -0.01
COL7A1-207ENST00000467985 PECRQ9BY49 303 aa14.97□□□□□ -0.01
COL7A1-207ENST00000467985 RBM38Q9H0Z9 239 aaKnown RBP14.97□□□□□ -0.01
COL7A1-207ENST00000467985 Q9N2K0 584 aa14.97□□□□□ -0.01
COL7A1-207ENST00000467985 BATF3Q9NR55 127 aa14.97□□□□□ -0.01
COL7A1-207ENST00000467985 KIAA1456Q9P272 454 aa14.97□□□□□ -0.01
COL7A1-207ENST00000467985 ZMAT5Q9UDW3 170 aaKnown RBP14.97□□□□□ -0.01
COL7A1-207ENST00000467985 RAB22AQ9UL26 194 aa14.97□□□□□ -0.01
COL7A1-207ENST00000467985 COL7A1Q02388 2944 aa14.97□□□□□ -0.01
COL7A1-207ENST00000467985 OR5H14A6NHG9 310 aa14.96□□□□□ -0.01
COL7A1-207ENST00000467985 ZNF701M0R085 212 aaPredicted RBP14.96□□□□□ -0.01
COL7A1-207ENST00000467985 CEACAM6P40199 344 aa14.96□□□□□ -0.01
COL7A1-207ENST00000467985 MRPS15P82914 257 aaKnown RBP14.96□□□□□ -0.01
COL7A1-207ENST00000467985 C5orf64Q2M2E5 130 aa14.96□□□□□ -0.01
COL7A1-207ENST00000467985 NPBQ8NG41 125 aa14.96□□□□□ -0.01
COL7A1-207ENST00000467985 DGCR14Q96DF8 476 aaKnown RBP14.96□□□□□ -0.01
COL7A1-207ENST00000467985 CMSS1Q9BQ75 279 aaKnown RBP14.96□□□□□ -0.01
COL7A1-207ENST00000467985 HDHD3Q9BSH5 251 aaPredicted RBP14.96□□□□□ -0.01
COL7A1-207ENST00000467985 CCL24O00175 119 aa14.95□□□□□ -0.02
COL7A1-207ENST00000467985 LDLRAD4O15165 306 aa14.95□□□□□ -0.02
COL7A1-207ENST00000467985 RBBP9O75884 186 aa14.95□□□□□ -0.02
COL7A1-207ENST00000467985 EGFEM1PQ0D2K5 195 aa14.95□□□□□ -0.02
COL7A1-207ENST00000467985 KIR2DS1Q14954 304 aa14.95□□□□□ -0.02
COL7A1-207ENST00000467985 LIN54Q6MZP7 749 aa14.95□□□□□ -0.02
COL7A1-207ENST00000467985 FAM131AQ6UXB0 335 aa14.95□□□□□ -0.02
COL7A1-207ENST00000467985 AP3S1Q92572 193 aa14.95□□□□□ -0.02
COL7A1-207ENST00000467985 RAX2Q96IS3 184 aa14.95□□□□□ -0.02
COL7A1-207ENST00000467985 RITA1Q96K30 269 aa14.95□□□□□ -0.02
COL7A1-207ENST00000467985 AGMATQ9BSE5 352 aa14.95□□□□□ -0.02
COL7A1-207ENST00000467985 OR51J1Q9H342 316 aa14.95□□□□□ -0.02
COL7A1-207ENST00000467985 A0A0B4J203 849 aa14.94□□□□□ -0.02
COL7A1-207ENST00000467985 TMEM272A0A1B0GTI8 110 aa14.94□□□□□ -0.02
COL7A1-207ENST00000467985 TRDCB7Z8K6 153 aa14.94□□□□□ -0.02
COL7A1-207ENST00000467985 TMEM127O75204 238 aa14.94□□□□□ -0.02
COL7A1-207ENST00000467985 NDUFA3O95167 84 aa14.94□□□□□ -0.02
COL7A1-207ENST00000467985 SNRPBP14678 240 aaKnown RBP14.94□□□□□ -0.02
COL7A1-207ENST00000467985 PSMB8P28062 276 aa14.94□□□□□ -0.02
COL7A1-207ENST00000467985 RPL39P5Q59GN2 51 aa14.94□□□□□ -0.02
COL7A1-207ENST00000467985 PLAC9Q5JTB6 97 aa14.94□□□□□ -0.02
COL7A1-207ENST00000467985 TMEM65Q6PI78 240 aa14.94□□□□□ -0.02
COL7A1-207ENST00000467985 PTX4Q96A99 478 aa14.94□□□□□ -0.02
COL7A1-207ENST00000467985 RAB3CQ96E17 227 aa14.94□□□□□ -0.02
COL7A1-207ENST00000467985 RBMXL1Q96E39 390 aaKnown RBP14.94□□□□□ -0.02
COL7A1-207ENST00000467985 C11orf54Q9H0W9 315 aaPredicted RBP14.94□□□□□ -0.02
COL7A1-207ENST00000467985 OR1A1Q9P1Q5 309 aa14.94□□□□□ -0.02
COL7A1-207ENST00000467985 SCTP09683 121 aa14.93□□□□□ -0.02
COL7A1-207ENST00000467985 CD3GP09693 182 aa14.93□□□□□ -0.02
COL7A1-207ENST00000467985 CT45A6P0DMU7 189 aa14.93□□□□□ -0.02
COL7A1-207ENST00000467985 CT45A5P0DMU8 189 aa14.93□□□□□ -0.02
COL7A1-207ENST00000467985 CT45A7P0DMV0 189 aa14.93□□□□□ -0.02
COL7A1-207ENST00000467985 CNTFRP26992 372 aa14.93□□□□□ -0.02
COL7A1-207ENST00000467985 LCNL1Q6ZST4 164 aa14.93□□□□□ -0.02
COL7A1-207ENST00000467985 OR4A4PQ8NGN8 299 aa14.93□□□□□ -0.02
COL7A1-207ENST00000467985 LGALS14Q8TCE9 139 aa14.93□□□□□ -0.02
COL7A1-207ENST00000467985 C4orf3Q8WVX3 66 aa14.93□□□□□ -0.02
COL7A1-207ENST00000467985 ABHD14BQ96IU4 210 aa14.93□□□□□ -0.02
COL7A1-207ENST00000467985 RNF5Q99942 180 aa14.93□□□□□ -0.02
COL7A1-207ENST00000467985 DCUN1D5Q9BTE7 237 aa14.93□□□□□ -0.02
COL7A1-207ENST00000467985 PARP12Q9H0J9 701 aaKnown RBP14.93□□□□□ -0.02
COL7A1-207ENST00000467985 PARP11Q9NR21 331 aa14.93□□□□□ -0.02
COL7A1-207ENST00000467985 ZNF221Q9UK13 617 aa14.93□□□□□ -0.02
COL7A1-207ENST00000467985 WASHC3Q9Y3C0 194 aa14.93□□□□□ -0.02
COL7A1-207ENST00000467985 IGHV7-81A0A0B4J1V7 117 aa14.92□□□□□ -0.02
COL7A1-207ENST00000467985 TRAV41A0A0B4J266 112 aa14.92□□□□□ -0.02
COL7A1-207ENST00000467985 H0YJW9 148 aa14.92□□□□□ -0.02
COL7A1-207ENST00000467985 H7C2Y5 167 aa14.92□□□□□ -0.02
COL7A1-207ENST00000467985 ATP6V0E1O15342 81 aa14.92□□□□□ -0.02
COL7A1-207ENST00000467985 ZNF182P17025 639 aaPredicted RBP14.92□□□□□ -0.02
COL7A1-207ENST00000467985 RAB6AP20340 208 aa14.92□□□□□ -0.02
COL7A1-207ENST00000467985 PPIFP30405 207 aaKnown RBP14.92□□□□□ -0.02
COL7A1-207ENST00000467985 KRTAP10-11P60412 298 aa14.92□□□□□ -0.02
COL7A1-207ENST00000467985 MZT2AQ6P582 158 aa14.92□□□□□ -0.02
COL7A1-207ENST00000467985 OR5AN1Q8NGI8 311 aa14.92□□□□□ -0.02
COL7A1-207ENST00000467985 KCTD12Q96CX2 325 aaKnown RBP14.92□□□□□ -0.02
COL7A1-207ENST00000467985 CCDC59Q9P031 241 aaKnown RBP14.92□□□□□ -0.02
COL7A1-207ENST00000467985 ETV7Q9Y603 341 aa14.92□□□□□ -0.02
COL7A1-207ENST00000467985 METTL21EPA6NDL7 271 aa14.91□□□□□ -0.02
COL7A1-207ENST00000467985 K7EIL1 84 aa14.91□□□□□ -0.02
COL7A1-207ENST00000467985 RRHO14718 337 aa14.91□□□□□ -0.02
COL7A1-207ENST00000467985 DIRAS3O95661 229 aa14.91□□□□□ -0.02
COL7A1-207ENST00000467985 IGLV1-40P01703 118 aa14.91□□□□□ -0.02
COL7A1-207ENST00000467985 GSTP1P09211 210 aaKnown RBP14.91□□□□□ -0.02
COL7A1-207ENST00000467985 HOXD3P31249 432 aaPredicted RBP14.91□□□□□ -0.02
COL7A1-207ENST00000467985 RAB25P57735 213 aa14.91□□□□□ -0.02
COL7A1-207ENST00000467985 PLGLAQ15195 96 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms