RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 LRRC75BQ2VPJ9 315 aa2.22□□□□□ -2.05
SMC4-208ENST00000467468 FAM78BQ5VT40 261 aa2.22□□□□□ -2.05
SMC4-208ENST00000467468 OR10K2Q6IF99 312 aa2.22□□□□□ -2.05
SMC4-208ENST00000467468 SFXN4Q6P4A7 337 aa2.22□□□□□ -2.05
SMC4-208ENST00000467468 EIF4E3Q8N5X7 224 aaKnown RBP2.22□□□□□ -2.05
SMC4-208ENST00000467468 ASB17Q8WXJ9 295 aa2.22□□□□□ -2.05
SMC4-208ENST00000467468 MS4A6EQ96DS6 147 aa2.22□□□□□ -2.05
SMC4-208ENST00000467468 ANKRD36BP1Q96IX9 119 aa2.22□□□□□ -2.05
SMC4-208ENST00000467468 SLC35G5Q96KT7 338 aa2.22□□□□□ -2.05
SMC4-208ENST00000467468 CCDC42Q96M95 316 aa2.22□□□□□ -2.05
SMC4-208ENST00000467468 OR52B2Q96RD2 323 aa2.22□□□□□ -2.05
SMC4-208ENST00000467468 TBX5Q99593 518 aa2.22□□□□□ -2.05
SMC4-208ENST00000467468 ABCG5Q9H222 651 aa2.22□□□□□ -2.05
SMC4-208ENST00000467468 OR51V1Q9H2C8 321 aa2.22□□□□□ -2.05
SMC4-208ENST00000467468 OR51I1Q9H343 314 aa2.22□□□□□ -2.05
SMC4-208ENST00000467468 ASF1BQ9NVP2 202 aa2.22□□□□□ -2.05
SMC4-208ENST00000467468 EMC3Q9P0I2 261 aa2.22□□□□□ -2.05
SMC4-208ENST00000467468 CARHSP1Q9Y2V2 147 aaKnown RBP2.22□□□□□ -2.05
SMC4-208ENST00000467468 NID2Q14112 1375 aa2.22□□□□□ -2.05
SMC4-208ENST00000467468 ZBED9Q6R2W3 1325 aa2.21□□□□□ -2.06
SMC4-208ENST00000467468 M0R381 172 aa2.21□□□□□ -2.06
SMC4-208ENST00000467468 RPP14O95059 124 aaKnown RBP2.21□□□□□ -2.06
SMC4-208ENST00000467468 LYPLA2O95372 231 aa2.21□□□□□ -2.06
SMC4-208ENST00000467468 CPSF4O95639 269 aaKnown RBP2.21□□□□□ -2.06
SMC4-208ENST00000467468 IGLV3-19P01714 112 aa2.21□□□□□ -2.06
SMC4-208ENST00000467468 IFNA16P05015 189 aa2.21□□□□□ -2.06
SMC4-208ENST00000467468 HRES1P13985 223 aa2.21□□□□□ -2.06
SMC4-208ENST00000467468 REG1BP48304 166 aa2.21□□□□□ -2.06
SMC4-208ENST00000467468 RAP1GDS1P52306 607 aa2.21□□□□□ -2.06
SMC4-208ENST00000467468 KRTAP10-10P60014 251 aa2.21□□□□□ -2.06
SMC4-208ENST00000467468 RAB5BP61020 215 aa2.21□□□□□ -2.06
SMC4-208ENST00000467468 CRB1P82279 1406 aa2.21□□□□□ -2.06
SMC4-208ENST00000467468 EMX1Q04741 257 aaPredicted RBP2.21□□□□□ -2.06
SMC4-208ENST00000467468 OR2F1Q13607 317 aa2.21□□□□□ -2.06
SMC4-208ENST00000467468 ZNF141Q15928 474 aa2.21□□□□□ -2.06
SMC4-208ENST00000467468 BATFQ16520 125 aa2.21□□□□□ -2.06
SMC4-208ENST00000467468 SAPCD1Q5SSQ6 148 aa2.21□□□□□ -2.06
SMC4-208ENST00000467468 CEP170Q5SW79 1584 aa2.21□□□□□ -2.06
SMC4-208ENST00000467468 SPATA31E1Q6ZUB1 1445 aa2.21□□□□□ -2.06
SMC4-208ENST00000467468 LYPD6Q86Y78 171 aa2.21□□□□□ -2.06
SMC4-208ENST00000467468 CPNE2Q96FN4 548 aaPredicted RBP2.21□□□□□ -2.06
SMC4-208ENST00000467468 TMEM109Q9BVC6 243 aa2.21□□□□□ -2.06
SMC4-208ENST00000467468 OR51I2Q9H344 312 aa2.21□□□□□ -2.06
SMC4-208ENST00000467468 LSM5Q9Y4Y9 91 aaKnown RBP2.21□□□□□ -2.06
SMC4-208ENST00000467468 THADAQ6YHU6 1953 aa2.21□□□□□ -2.06
SMC4-208ENST00000467468 KIF15Q9NS87 1388 aa2.21□□□□□ -2.06
SMC4-208ENST00000467468 SNAPC4Q5SXM2 1469 aa2.2□□□□□ -2.06
SMC4-208ENST00000467468 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.2□□□□□ -2.06
SMC4-208ENST00000467468 GSTZ1O43708 216 aaPredicted RBP2.2□□□□□ -2.06
SMC4-208ENST00000467468 RPS17P08708 135 aaKnown RBP2.2□□□□□ -2.06
SMC4-208ENST00000467468 CTXN2P0C2S0 81 aa2.2□□□□□ -2.06
SMC4-208ENST00000467468 UCHL3P15374 230 aa2.2□□□□□ -2.06
SMC4-208ENST00000467468 ATP6V0CP27449 155 aa2.2□□□□□ -2.06
SMC4-208ENST00000467468 TMEM33P57088 247 aa2.2□□□□□ -2.06
SMC4-208ENST00000467468 MRPL51Q4U2R6 128 aaKnown RBP2.2□□□□□ -2.06
SMC4-208ENST00000467468 C1orf194Q5T5A4 169 aa2.2□□□□□ -2.06
SMC4-208ENST00000467468 C8orf74Q6P047 294 aa2.2□□□□□ -2.06
SMC4-208ENST00000467468 WDR59Q6PJI9 974 aa2.2□□□□□ -2.06
SMC4-208ENST00000467468 SBSNQ6UWP8 590 aa2.2□□□□□ -2.06
SMC4-208ENST00000467468 SCXQ7RTU7 201 aa2.2□□□□□ -2.06
SMC4-208ENST00000467468 ZNF550Q7Z398 422 aa2.2□□□□□ -2.06
SMC4-208ENST00000467468 TRAPPC5Q8IUR0 188 aa2.2□□□□□ -2.06
SMC4-208ENST00000467468 C1orf174Q8IYL3 243 aa2.2□□□□□ -2.06
SMC4-208ENST00000467468 UBL4BQ8N7F7 174 aa2.2□□□□□ -2.06
SMC4-208ENST00000467468 OR2D3Q8NGH3 330 aa2.2□□□□□ -2.06
SMC4-208ENST00000467468 CHMP6Q96FZ7 201 aa2.2□□□□□ -2.06
SMC4-208ENST00000467468 IMP4Q96G21 291 aaKnown RBP2.2□□□□□ -2.06
SMC4-208ENST00000467468 SLC25A44Q96H78 314 aaPredicted RBP2.2□□□□□ -2.06
SMC4-208ENST00000467468 UPK3BQ9BT76 320 aa2.2□□□□□ -2.06
SMC4-208ENST00000467468 NKX6-2Q9C056 277 aaPredicted RBP2.2□□□□□ -2.06
SMC4-208ENST00000467468 VPREB3Q9UKI3 123 aa2.2□□□□□ -2.06
SMC4-208ENST00000467468 HHLA2Q9UM44 414 aa2.2□□□□□ -2.06
SMC4-208ENST00000467468 THSD7AQ9UPZ6 1657 aa2.19□□□□□ -2.06
SMC4-208ENST00000467468 TMED7-TICAM2A0A0A6YYA0 188 aa2.19□□□□□ -2.06
SMC4-208ENST00000467468 A0A1W2PQL4 384 aaPredicted RBP2.19□□□□□ -2.06
SMC4-208ENST00000467468 IGSF23A1L1A6 192 aa2.19□□□□□ -2.06
SMC4-208ENST00000467468 A8MWP6 167 aa2.19□□□□□ -2.06
SMC4-208ENST00000467468 DISC1C4P0D8 188 aa2.19□□□□□ -2.06
SMC4-208ENST00000467468 AP3S2P59780 193 aa2.19□□□□□ -2.06
SMC4-208ENST00000467468 LSM6P62312 80 aaKnown RBP2.19□□□□□ -2.06
SMC4-208ENST00000467468 HOXC5Q00444 222 aa2.19□□□□□ -2.06
SMC4-208ENST00000467468 STX5Q13190 355 aa2.19□□□□□ -2.06
SMC4-208ENST00000467468 PLPPR5Q32ZL2 321 aa2.19□□□□□ -2.06
SMC4-208ENST00000467468 LYPD1Q8N2G4 141 aa2.19□□□□□ -2.06
SMC4-208ENST00000467468 LY6G5BQ8NDX9 201 aa2.19□□□□□ -2.06
SMC4-208ENST00000467468 MUC7Q8TAX7 377 aa2.19□□□□□ -2.06
SMC4-208ENST00000467468 RAD51AP1Q96B01 352 aa2.19□□□□□ -2.06
SMC4-208ENST00000467468 SLC22A13Q9Y226 551 aa2.19□□□□□ -2.06
SMC4-208ENST00000467468 COL1A2P08123 1366 aa2.19□□□□□ -2.06
SMC4-208ENST00000467468 KPNA3O00505 521 aaPredicted RBP2.18□□□□□ -2.06
SMC4-208ENST00000467468 PSCAO43653 123 aa2.18□□□□□ -2.06
SMC4-208ENST00000467468 SYNGR2O43760 224 aa2.18□□□□□ -2.06
SMC4-208ENST00000467468 ATP5HO75947 161 aa2.18□□□□□ -2.06
SMC4-208ENST00000467468 APOMO95445 188 aa2.18□□□□□ -2.06
SMC4-208ENST00000467468 TCRBP04435 133 aa2.18□□□□□ -2.06
SMC4-208ENST00000467468 CRYGDP07320 174 aa2.18□□□□□ -2.06
SMC4-208ENST00000467468 OMPP47874 163 aa2.18□□□□□ -2.06
SMC4-208ENST00000467468 MARCKSL1P49006 195 aa2.18□□□□□ -2.06
SMC4-208ENST00000467468 SULT1A1P50225 295 aa2.18□□□□□ -2.06
SMC4-208ENST00000467468 TSPEAR-AS2P59090 65 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms