RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 JPT1Q9UK76 154 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 NEUROG3Q9Y4Z2 214 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 ASB4Q9Y574 426 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 PCYT1BQ9Y5K3 369 aaPredicted RBP2.61□□□□□ -1.99
VPS50-209ENST00000467326 RLFQ13129 1914 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 PRDM2Q13029 1718 aa2.61□□□□□ -1.99
VPS50-209ENST00000467326 WRNQ14191 1432 aaPredicted RBP eCLIP2.6□□□□□ -1.99
VPS50-209ENST00000467326 IGKV6D-21A0A0A0MT36 114 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 IGHV3-74A0A0B4J1X5 117 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 TRAV26-2A0A0B4J265 109 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 A0A0J9YXY3 114 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 OR5H1A6NKK0 313 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 KNCNA6PVL3 124 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 B4DEV8 164 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 C5orf58C9J3I9 102 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.6□□□□□ -1.99
VPS50-209ENST00000467326 TRAPPC2LH3BP13 241 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 K7EP13 123 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 DNASE2O00115 360 aaPredicted RBP2.6□□□□□ -1.99
VPS50-209ENST00000467326 LGALS9O00182 355 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 PIRO00625 290 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 CHST10O43529 356 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 EIF1BO60739 113 aaKnown RBP2.6□□□□□ -1.99
VPS50-209ENST00000467326 SERF1AO75920 110 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 PIAS1O75925 651 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 OR2J2O76002 312 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 IFNA10P01566 189 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 HLA-DRB1P01911 266 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 S100A8P05109 93 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 C8GP07360 202 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 OR56A5P0C7T3 313 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 SMIM6P0DI80 62 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 CTSEP14091 401 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 GZMHP20718 246 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 OR10J1P30954 320 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 POLR2IP36954 125 aaKnown RBP2.6□□□□□ -1.99
VPS50-209ENST00000467326 EIF1P41567 113 aaKnown RBP2.6□□□□□ -1.99
VPS50-209ENST00000467326 RAB13P51153 203 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 EMP1P54849 157 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 PIGPP57054 158 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 CKS1BP61024 79 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 NCALDP61601 193 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 TBPL1P62380 186 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 RAP1AP62834 184 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 BAMBIQ13145 260 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 ERCC8Q13216 396 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 ABCA11PQ4W5N1 156 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 MESTQ5EB52 335 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 C1orf194Q5T5A4 169 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 SBSNQ6UWP8 590 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 IGFL2Q6UWQ7 119 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 Q6ZRU5 148 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 RFLNAQ6ZTI6 216 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 IFT20Q8IY31 132 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 ZIC4Q8N9L1 334 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 DCAF4L2Q8NA75 395 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 OR4D11Q8NGI4 311 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 OR10G4Q8NGN3 311 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 OR9A2Q8NGT5 310 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 FRZBQ92765 325 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 GALMQ96C23 342 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 PDXPQ96GD0 296 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 TMEM101Q96IK0 257 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 KCNS1Q96KK3 526 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 C2orf88Q9BSF0 95 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 TMEM147Q9BVK8 224 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 TMEM126AQ9H061 195 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 RNASE7Q9H1E1 156 aaKnown RBP2.6□□□□□ -1.99
VPS50-209ENST00000467326 VCXQ9H320 206 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 RBM12B-AS1Q9P1G2 102 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 NUFIP1Q9UHK0 495 aaKnown RBP2.6□□□□□ -1.99
VPS50-209ENST00000467326 KLF13Q9Y2Y9 288 aaPredicted RBP2.6□□□□□ -1.99
VPS50-209ENST00000467326 PXMP4Q9Y6I8 212 aa2.6□□□□□ -1.99
VPS50-209ENST00000467326 IBTKQ9P2D0 1353 aaPredicted RBP2.6□□□□□ -1.99
VPS50-209ENST00000467326 DCCP43146 1447 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 MIA2Q96PC5 1412 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 MRC2Q9UBG0 1479 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 WDR62O43379 1518 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 IGHV1-69-2A0A0G2JMI3 117 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 A0A1W2PQ67 120 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 OR4C45A6NMZ5 311 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 ZNF850A8MQ14 1090 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 LINC00587B1AMM8 73 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 NDUFC2-KCTD14E9PQ53 114 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 TMEM250H0YL14 139 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 DEGS1O15121 323 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 RGS5O15539 181 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 TNFSF13O75888 250 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 SLC25A14O95258 325 aaPredicted RBP2.59□□□□□ -1.99
VPS50-209ENST00000467326 IGHMP01871 453 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 C1QBP02746 253 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 FBP1P09467 338 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 GPX2P18283 190 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 IMPA1P29218 277 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 GABRA3P34903 492 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 GLRXP35754 106 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 PSMD8P48556 350 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 SERPINB10P48595 397 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 PSMB3P49720 205 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 GABARAPL2P60520 117 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms