RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 C1orf159Q96HA4 380 aa10.6□□□□□ -0.71
COL4A1-202ENST00000467182 C18orf12Q96KH6 178 aa10.6□□□□□ -0.71
COL4A1-202ENST00000467182 TMEM56Q96MV1 263 aa10.6□□□□□ -0.71
COL4A1-202ENST00000467182 OR2A7Q96R45 310 aa10.6□□□□□ -0.71
COL4A1-202ENST00000467182 ZNF436Q9C0F3 470 aaPredicted RBP10.6□□□□□ -0.71
COL4A1-202ENST00000467182 SIRPDQ9H106 197 aa10.6□□□□□ -0.71
COL4A1-202ENST00000467182 KCNIP3Q9Y2W7 256 aa10.6□□□□□ -0.71
COL4A1-202ENST00000467182 TMEM56-RWDD3S4R434 201 aa10.6□□□□□ -0.71
COL4A1-202ENST00000467182 SPG11Q96JI7 2443 aa10.6□□□□□ -0.71
COL4A1-202ENST00000467182 ARID1AO14497 2285 aa10.6□□□□□ -0.71
COL4A1-202ENST00000467182 APCP25054 2843 aa10.59□□□□□ -0.71
COL4A1-202ENST00000467182 IGHV2-26A0A0B4J1V2 119 aa10.59□□□□□ -0.71
COL4A1-202ENST00000467182 CCSO14618 274 aa10.59□□□□□ -0.71
COL4A1-202ENST00000467182 RAB29O14966 203 aa10.59□□□□□ -0.71
COL4A1-202ENST00000467182 FOXH1O75593 365 aa10.59□□□□□ -0.71
COL4A1-202ENST00000467182 ADAP1O75689 374 aa10.59□□□□□ -0.71
COL4A1-202ENST00000467182 CDS2O95674 445 aa10.59□□□□□ -0.71
COL4A1-202ENST00000467182 IGKV1-39P01597 117 aa10.59□□□□□ -0.71
COL4A1-202ENST00000467182 IGLV1-47P01700 117 aa10.59□□□□□ -0.71
COL4A1-202ENST00000467182 IGKV1D-39P04432 117 aa10.59□□□□□ -0.71
COL4A1-202ENST00000467182 ANXA3P12429 323 aa10.59□□□□□ -0.71
COL4A1-202ENST00000467182 MMP9P14780 707 aa10.59□□□□□ -0.71
COL4A1-202ENST00000467182 PRTN3P24158 256 aa10.59□□□□□ -0.71
COL4A1-202ENST00000467182 SRSF4Q08170 494 aaKnown RBP10.59□□□□□ -0.71
COL4A1-202ENST00000467182 ZNF833PQ6ZTB9 187 aa10.59□□□□□ -0.71
COL4A1-202ENST00000467182 SELENOHQ8IZQ5 122 aaKnown RBP10.59□□□□□ -0.71
COL4A1-202ENST00000467182 TCTE3Q8IZS6 198 aa10.59□□□□□ -0.71
COL4A1-202ENST00000467182 LYG1Q8N1E2 194 aa10.59□□□□□ -0.71
COL4A1-202ENST00000467182 OR51H1Q8NH63 302 aa10.59□□□□□ -0.71
COL4A1-202ENST00000467182 OR9G1Q8NH87 305 aa10.59□□□□□ -0.71
COL4A1-202ENST00000467182 DDB2Q92466 427 aa10.59□□□□□ -0.71
COL4A1-202ENST00000467182 ST6GALNAC6Q969X2 333 aa10.59□□□□□ -0.71
COL4A1-202ENST00000467182 UNKLQ9H9P5 680 aaKnown RBP10.59□□□□□ -0.71
COL4A1-202ENST00000467182 KPTNQ9Y664 436 aa10.59□□□□□ -0.71
COL4A1-202ENST00000467182 CENPEQ02224 2701 aa10.58□□□□□ -0.72
COL4A1-202ENST00000467182 G3V3Q6 166 aa10.58□□□□□ -0.72
COL4A1-202ENST00000467182 B3GALNT1O75752 331 aa10.58□□□□□ -0.72
COL4A1-202ENST00000467182 USF1P22415 310 aaPredicted RBP10.58□□□□□ -0.72
COL4A1-202ENST00000467182 S100GP29377 79 aa10.58□□□□□ -0.72
COL4A1-202ENST00000467182 ZNF137PP52743 207 aa10.58□□□□□ -0.72
COL4A1-202ENST00000467182 Q5PR19 223 aa10.58□□□□□ -0.72
COL4A1-202ENST00000467182 NCR3LG1Q68D85 454 aa10.58□□□□□ -0.72
COL4A1-202ENST00000467182 C11orf88Q6PI97 169 aa10.58□□□□□ -0.72
COL4A1-202ENST00000467182 PRSS57Q6UWY2 283 aa10.58□□□□□ -0.72
COL4A1-202ENST00000467182 PPP1R14BQ96C90 147 aa10.58□□□□□ -0.72
COL4A1-202ENST00000467182 HSD17B10Q99714 261 aaKnown RBP10.58□□□□□ -0.72
COL4A1-202ENST00000467182 RAB18Q9NP72 206 aa10.58□□□□□ -0.72
COL4A1-202ENST00000467182 SIRT7Q9NRC8 400 aa10.58□□□□□ -0.72
COL4A1-202ENST00000467182 ANKRD17O75179 2603 aaKnown RBP10.57□□□□□ -0.72
COL4A1-202ENST00000467182 hCG_1809904A0A1W2PP81 198 aa10.57□□□□□ -0.72
COL4A1-202ENST00000467182 A0A1W2PPE2 198 aa10.57□□□□□ -0.72
COL4A1-202ENST00000467182 A0A1W2PR64 198 aa10.57□□□□□ -0.72
COL4A1-202ENST00000467182 A0A1W2PRV1 198 aa10.57□□□□□ -0.72
COL4A1-202ENST00000467182 RNF212BA8MTL3 300 aa10.57□□□□□ -0.72
COL4A1-202ENST00000467182 MPTX1A8MV57 137 aa10.57□□□□□ -0.72
COL4A1-202ENST00000467182 BOLA2-SMG1P6H3BVE0 249 aa10.57□□□□□ -0.72
COL4A1-202ENST00000467182 M0R1X1 148 aa10.57□□□□□ -0.72
COL4A1-202ENST00000467182 GIPP09681 153 aaPredicted RBP10.57□□□□□ -0.72
COL4A1-202ENST00000467182 DVL1P1P54792 670 aaPredicted RBP10.57□□□□□ -0.72
COL4A1-202ENST00000467182 SRPXP78539 464 aa10.57□□□□□ -0.72
COL4A1-202ENST00000467182 DIAPH2-AS1Q14236 149 aa10.57□□□□□ -0.72
COL4A1-202ENST00000467182 HLA-DRB5Q30154 266 aa10.57□□□□□ -0.72
COL4A1-202ENST00000467182 TMEM268Q5VZI3 342 aa10.57□□□□□ -0.72
COL4A1-202ENST00000467182 FAM71F2Q6NXP2 309 aa10.57□□□□□ -0.72
COL4A1-202ENST00000467182 LYZL2Q7Z4W2 148 aa10.57□□□□□ -0.72
COL4A1-202ENST00000467182 VMO1Q7Z5L0 202 aa10.57□□□□□ -0.72
COL4A1-202ENST00000467182 LGI3Q8N145 548 aa10.57□□□□□ -0.72
COL4A1-202ENST00000467182 ZNF383Q8NA42 475 aa10.57□□□□□ -0.72
COL4A1-202ENST00000467182 DRAXINQ8NBI3 349 aaPredicted RBP10.57□□□□□ -0.72
COL4A1-202ENST00000467182 BEND2Q8NDZ0 799 aa10.57□□□□□ -0.72
COL4A1-202ENST00000467182 OR11H6Q8NGC7 330 aa10.57□□□□□ -0.72
COL4A1-202ENST00000467182 OR4P4Q8NGL7 312 aa10.57□□□□□ -0.72
COL4A1-202ENST00000467182 IL22RA2Q969J5 263 aa10.57□□□□□ -0.72
COL4A1-202ENST00000467182 TBX15Q96SF7 602 aa10.57□□□□□ -0.72
COL4A1-202ENST00000467182 CLEC7AQ9BXN2 247 aa10.57□□□□□ -0.72
COL4A1-202ENST00000467182 METTL8Q9H825 291 aaKnown RBP10.57□□□□□ -0.72
COL4A1-202ENST00000467182 FAM212BQ9NTI7 297 aaPredicted RBP10.57□□□□□ -0.72
COL4A1-202ENST00000467182 LIN7CQ9NUP9 197 aaKnown RBP10.57□□□□□ -0.72
COL4A1-202ENST00000467182 INSIG2Q9Y5U4 225 aa10.57□□□□□ -0.72
COL4A1-202ENST00000467182 POLQO75417 2590 aa10.57□□□□□ -0.72
COL4A1-202ENST00000467182 ODF3BA8MYP8 253 aa10.56□□□□□ -0.72
COL4A1-202ENST00000467182 LY6LH3BQJ8 138 aa10.56□□□□□ -0.72
COL4A1-202ENST00000467182 SMLR1H3BR10 107 aa10.56□□□□□ -0.72
COL4A1-202ENST00000467182 RAMP3O60896 148 aa10.56□□□□□ -0.72
COL4A1-202ENST00000467182 HOXB5P09067 269 aa10.56□□□□□ -0.72
COL4A1-202ENST00000467182 CT45A6P0DMU7 189 aa10.56□□□□□ -0.72
COL4A1-202ENST00000467182 CT45A5P0DMU8 189 aa10.56□□□□□ -0.72
COL4A1-202ENST00000467182 CT45A7P0DMV0 189 aa10.56□□□□□ -0.72
COL4A1-202ENST00000467182 HOXB4P17483 251 aaPredicted RBP10.56□□□□□ -0.72
COL4A1-202ENST00000467182 COX7A1P24310 79 aa10.56□□□□□ -0.72
COL4A1-202ENST00000467182 PAX8Q06710 450 aa10.56□□□□□ -0.72
COL4A1-202ENST00000467182 LOXL1Q08397 574 aaPredicted RBP10.56□□□□□ -0.72
COL4A1-202ENST00000467182 CATR1Q13166 79 aa10.56□□□□□ -0.72
COL4A1-202ENST00000467182 KLRD1Q13241 179 aa10.56□□□□□ -0.72
COL4A1-202ENST00000467182 IL15RAQ13261 267 aa10.56□□□□□ -0.72
COL4A1-202ENST00000467182 Q5BKY6 102 aa10.56□□□□□ -0.72
COL4A1-202ENST00000467182 LDLRAD2Q5SZI1 272 aa10.56□□□□□ -0.72
COL4A1-202ENST00000467182 GGNBP1Q5YKI7 109 aa10.56□□□□□ -0.72
COL4A1-202ENST00000467182 PNKDQ8N490 385 aa10.56□□□□□ -0.72
COL4A1-202ENST00000467182 TCTEX1D1Q8N7M0 179 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms