RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 GOSR1O95249 250 aa7.87□□□□□ -1.15
APOBEC1-202ENST00000467171 IGKV1-39P01597 117 aa7.87□□□□□ -1.15
APOBEC1-202ENST00000467171 IGKV1D-39P04432 117 aa7.87□□□□□ -1.15
APOBEC1-202ENST00000467171 IGHV3-43DP0DP04 118 aa7.87□□□□□ -1.15
APOBEC1-202ENST00000467171 IGFBP2P18065 325 aa7.87□□□□□ -1.15
APOBEC1-202ENST00000467171 S100A1P23297 94 aa7.87□□□□□ -1.15
APOBEC1-202ENST00000467171 RPL12P30050 165 aaKnown RBP7.87□□□□□ -1.15
APOBEC1-202ENST00000467171 RAB14P61106 215 aa7.87□□□□□ -1.15
APOBEC1-202ENST00000467171 EIF5AP63241 154 aaKnown RBP7.87□□□□□ -1.15
APOBEC1-202ENST00000467171 FAM53AQ6NSI3 398 aaPredicted RBP7.87□□□□□ -1.15
APOBEC1-202ENST00000467171 FAM219AQ8IW50 185 aa7.87□□□□□ -1.15
APOBEC1-202ENST00000467171 DMBX1Q8NFW5 382 aa7.87□□□□□ -1.15
APOBEC1-202ENST00000467171 GPR146Q96CH1 333 aa7.87□□□□□ -1.15
APOBEC1-202ENST00000467171 RAB1BQ9H0U4 201 aa7.87□□□□□ -1.15
APOBEC1-202ENST00000467171 IFI27L2Q9H2X8 130 aa7.87□□□□□ -1.15
APOBEC1-202ENST00000467171 GAL3ST2Q9H3Q3 398 aa7.87□□□□□ -1.15
APOBEC1-202ENST00000467171 CYTL1Q9NRR1 136 aa7.87□□□□□ -1.15
APOBEC1-202ENST00000467171 COA4Q9NYJ1 87 aa7.87□□□□□ -1.15
APOBEC1-202ENST00000467171 RPUSD1Q9UJJ7 312 aaKnown RBP7.87□□□□□ -1.15
APOBEC1-202ENST00000467171 RNF150Q9ULK6 438 aa7.87□□□□□ -1.15
APOBEC1-202ENST00000467171 PSG11Q9UQ72 335 aa7.87□□□□□ -1.15
APOBEC1-202ENST00000467171 LAMP3Q9UQV4 416 aa7.87□□□□□ -1.15
APOBEC1-202ENST00000467171 RCL1Q9Y2P8 373 aaKnown RBP7.87□□□□□ -1.15
APOBEC1-202ENST00000467171 LSM5Q9Y4Y9 91 aaKnown RBP7.87□□□□□ -1.15
APOBEC1-202ENST00000467171 ROS1P08922 2347 aa7.86□□□□□ -1.15
APOBEC1-202ENST00000467171 TRBV23-1A0A0A0MS06 115 aa7.86□□□□□ -1.15
APOBEC1-202ENST00000467171 A0A0G2JRQ6 117 aa7.86□□□□□ -1.15
APOBEC1-202ENST00000467171 KIAA1324LA8MWY0 1029 aaPredicted RBP7.86□□□□□ -1.15
APOBEC1-202ENST00000467171 GPR137BO60478 399 aa7.86□□□□□ -1.15
APOBEC1-202ENST00000467171 PROP1O75360 226 aa7.86□□□□□ -1.15
APOBEC1-202ENST00000467171 CLDN1O95832 211 aa7.86□□□□□ -1.15
APOBEC1-202ENST00000467171 SCGB1D2O95969 90 aa7.86□□□□□ -1.15
APOBEC1-202ENST00000467171 IGKV1-5P01602 117 aa7.86□□□□□ -1.15
APOBEC1-202ENST00000467171 GAPDHP04406 335 aaKnown RBP7.86□□□□□ -1.15
APOBEC1-202ENST00000467171 DANCRP0C864 163 aa7.86□□□□□ -1.15
APOBEC1-202ENST00000467171 P0C879 139 aa7.86□□□□□ -1.15
APOBEC1-202ENST00000467171 TPT1P13693 172 aaKnown RBP7.86□□□□□ -1.15
APOBEC1-202ENST00000467171 NDUFB7P17568 137 aa7.86□□□□□ -1.15
APOBEC1-202ENST00000467171 PVALBP20472 110 aaPredicted RBP7.86□□□□□ -1.15
APOBEC1-202ENST00000467171 DUTP33316 252 aaKnown RBP7.86□□□□□ -1.15
APOBEC1-202ENST00000467171 KIR2DS2P43631 304 aa7.86□□□□□ -1.15
APOBEC1-202ENST00000467171 LPAR6P43657 344 aa7.86□□□□□ -1.15
APOBEC1-202ENST00000467171 GPR12P47775 334 aa7.86□□□□□ -1.15
APOBEC1-202ENST00000467171 ARHGDIBP52566 201 aa7.86□□□□□ -1.15
APOBEC1-202ENST00000467171 RPL30P62888 115 aaKnown RBP7.86□□□□□ -1.15
APOBEC1-202ENST00000467171 RPL31P62899 125 aaKnown RBP7.86□□□□□ -1.15
APOBEC1-202ENST00000467171 SLC7A5P1Q8MH63 180 aa7.86□□□□□ -1.15
APOBEC1-202ENST00000467171 OR8H3Q8N146 312 aa7.86□□□□□ -1.15
APOBEC1-202ENST00000467171 FGFRL1Q8N441 504 aa7.86□□□□□ -1.15
APOBEC1-202ENST00000467171 C8orf31Q8N9H6 132 aa7.86□□□□□ -1.15
APOBEC1-202ENST00000467171 ZNF439Q8NDP4 499 aa7.86□□□□□ -1.15
APOBEC1-202ENST00000467171 ABHD14AQ9BUJ0 271 aa7.86□□□□□ -1.15
APOBEC1-202ENST00000467171 ZNF471Q9BX82 626 aaPredicted RBP7.86□□□□□ -1.15
APOBEC1-202ENST00000467171 MMP24Q9Y5R2 645 aa7.86□□□□□ -1.15
APOBEC1-202ENST00000467171 AUP1Q9Y679 476 aa7.86□□□□□ -1.15
APOBEC1-202ENST00000467171 FAM90A9PA6NNJ1 464 aa7.85□□□□□ -1.15
APOBEC1-202ENST00000467171 FAM90A26D6RGX4 464 aa7.85□□□□□ -1.15
APOBEC1-202ENST00000467171 DVL1O14640 695 aa7.85□□□□□ -1.15
APOBEC1-202ENST00000467171 RAB29O14966 203 aa7.85□□□□□ -1.15
APOBEC1-202ENST00000467171 FCN3O75636 299 aa7.85□□□□□ -1.15
APOBEC1-202ENST00000467171 IGHV2-70P01814 119 aa7.85□□□□□ -1.15
APOBEC1-202ENST00000467171 DAOP14920 347 aa7.85□□□□□ -1.15
APOBEC1-202ENST00000467171 COL8A2P25067 703 aa7.85□□□□□ -1.15
APOBEC1-202ENST00000467171 ZNF134P52741 427 aa7.85□□□□□ -1.15
APOBEC1-202ENST00000467171 BRWD1-AS2P59051 145 aa7.85□□□□□ -1.15
APOBEC1-202ENST00000467171 LTC4SQ16873 150 aa7.85□□□□□ -1.15
APOBEC1-202ENST00000467171 CT45A1Q5HYN5 189 aa7.85□□□□□ -1.15
APOBEC1-202ENST00000467171 CXorf66Q5JRM2 361 aaPredicted RBP7.85□□□□□ -1.15
APOBEC1-202ENST00000467171 TMEM200BQ69YZ2 307 aa7.85□□□□□ -1.15
APOBEC1-202ENST00000467171 LYPD2Q6UXB3 125 aa7.85□□□□□ -1.15
APOBEC1-202ENST00000467171 HEPN1Q6WQI6 88 aa7.85□□□□□ -1.15
APOBEC1-202ENST00000467171 BAP18Q8IXM2 172 aa7.85□□□□□ -1.15
APOBEC1-202ENST00000467171 SPAG16Q8N0X2 631 aa7.85□□□□□ -1.15
APOBEC1-202ENST00000467171 CT45A3Q8NHU0 189 aa7.85□□□□□ -1.15
APOBEC1-202ENST00000467171 TCTEX1D2Q8WW35 142 aa7.85□□□□□ -1.15
APOBEC1-202ENST00000467171 RAB39BQ96DA2 213 aa7.85□□□□□ -1.15
APOBEC1-202ENST00000467171 ADTRPQ96IZ2 230 aa7.85□□□□□ -1.15
APOBEC1-202ENST00000467171 RAB40CQ96S21 281 aa7.85□□□□□ -1.15
APOBEC1-202ENST00000467171 SSBP4Q9BWG4 385 aaPredicted RBP7.85□□□□□ -1.15
APOBEC1-202ENST00000467171 SLC25A32Q9H2D1 315 aa7.85□□□□□ -1.15
APOBEC1-202ENST00000467171 C19orf12Q9NSK7 152 aa7.85□□□□□ -1.15
APOBEC1-202ENST00000467171 MED9Q9NWA0 146 aa7.85□□□□□ -1.15
APOBEC1-202ENST00000467171 CTSZQ9UBR2 303 aa7.85□□□□□ -1.15
APOBEC1-202ENST00000467171 COL6A6A6NMZ7 2263 aa7.84□□□□□ -1.15
APOBEC1-202ENST00000467171 A0A087X0M5 115 aa7.84□□□□□ -1.15
APOBEC1-202ENST00000467171 A0A1B0GX30 115 aa7.84□□□□□ -1.15
APOBEC1-202ENST00000467171 LINC00473A8K010 186 aa7.84□□□□□ -1.15
APOBEC1-202ENST00000467171 C17orf98A8MV24 154 aa7.84□□□□□ -1.15
APOBEC1-202ENST00000467171 TOR1AO14656 332 aa7.84□□□□□ -1.15
APOBEC1-202ENST00000467171 KCNAB3O43448 404 aa7.84□□□□□ -1.15
APOBEC1-202ENST00000467171 JTBO76095 146 aa7.84□□□□□ -1.15
APOBEC1-202ENST00000467171 SPDEFO95238 335 aa7.84□□□□□ -1.15
APOBEC1-202ENST00000467171 HPRT1P00492 218 aa7.84□□□□□ -1.15
APOBEC1-202ENST00000467171 ZNF16P17020 682 aaPredicted RBP7.84□□□□□ -1.15
APOBEC1-202ENST00000467171 OMGP23515 440 aa7.84□□□□□ -1.15
APOBEC1-202ENST00000467171 AKR1C2P52895 323 aa7.84□□□□□ -1.15
APOBEC1-202ENST00000467171 TMEM33P57088 247 aa7.84□□□□□ -1.15
APOBEC1-202ENST00000467171 TAS2R30P59541 319 aa7.84□□□□□ -1.15
APOBEC1-202ENST00000467171 POLR2GP62487 172 aaKnown RBP eCLIP7.84□□□□□ -1.15
APOBEC1-202ENST00000467171 BAXQ07812 192 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms