RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 CLDN1O95832 211 aa17.44■□□□□ 0.38
PPP1R3F-203ENST00000466508 DANCRP0C864 163 aa17.44■□□□□ 0.38
PPP1R3F-203ENST00000466508 LYNX1P0DP58 116 aa17.44■□□□□ 0.38
PPP1R3F-203ENST00000466508 NKX2-1P43699 371 aaPredicted RBP17.44■□□□□ 0.38
PPP1R3F-203ENST00000466508 RAB7AP51149 207 aa17.44■□□□□ 0.38
PPP1R3F-203ENST00000466508 DTX2Q86UW9 622 aa17.44■□□□□ 0.38
PPP1R3F-203ENST00000466508 RNASE11Q8TAA1 199 aaKnown RBP17.44■□□□□ 0.38
PPP1R3F-203ENST00000466508 TCTEX1D2Q8WW35 142 aa17.44■□□□□ 0.38
PPP1R3F-203ENST00000466508 ST8SIA2Q92186 375 aa17.44■□□□□ 0.38
PPP1R3F-203ENST00000466508 ZNF471Q9BX82 626 aaPredicted RBP17.44■□□□□ 0.38
PPP1R3F-203ENST00000466508 GAL3ST2Q9H3Q3 398 aa17.44■□□□□ 0.38
PPP1R3F-203ENST00000466508 LPAR3Q9UBY5 353 aa17.44■□□□□ 0.38
PPP1R3F-203ENST00000466508 RCL1Q9Y2P8 373 aaKnown RBP17.44■□□□□ 0.38
PPP1R3F-203ENST00000466508 A0A1B0GU03 582 aa17.43■□□□□ 0.38
PPP1R3F-203ENST00000466508 F5H0A9 414 aaPredicted RBP17.43■□□□□ 0.38
PPP1R3F-203ENST00000466508 DVL1O14640 695 aa17.43■□□□□ 0.38
PPP1R3F-203ENST00000466508 HKR1P10072 659 aa17.43■□□□□ 0.38
PPP1R3F-203ENST00000466508 AKR1C2P52895 323 aa17.43■□□□□ 0.38
PPP1R3F-203ENST00000466508 ZNF273Q14593 569 aa17.43■□□□□ 0.38
PPP1R3F-203ENST00000466508 ABHD14AQ9BUJ0 271 aa17.43■□□□□ 0.38
PPP1R3F-203ENST00000466508 PLEKHA2Q9HB19 425 aa17.43■□□□□ 0.38
PPP1R3F-203ENST00000466508 A0A1W2PPR1 153 aa17.42■□□□□ 0.38
PPP1R3F-203ENST00000466508 RAMP3O60896 148 aa17.42■□□□□ 0.38
PPP1R3F-203ENST00000466508 IGKV1-5P01602 117 aa17.42■□□□□ 0.38
PPP1R3F-203ENST00000466508 IGHV3-7P01780 117 aa17.42■□□□□ 0.38
PPP1R3F-203ENST00000466508 RPL12P30050 165 aaKnown RBP17.42■□□□□ 0.38
PPP1R3F-203ENST00000466508 ALKAL2Q6UX46 152 aa17.42■□□□□ 0.38
PPP1R3F-203ENST00000466508 GPR146Q96CH1 333 aa17.42■□□□□ 0.38
PPP1R3F-203ENST00000466508 LINC00473A8K010 186 aa17.41■□□□□ 0.38
PPP1R3F-203ENST00000466508 NFYBP25208 207 aa17.41■□□□□ 0.38
PPP1R3F-203ENST00000466508 LPAR6P43657 344 aa17.41■□□□□ 0.38
PPP1R3F-203ENST00000466508 UTF1Q5T230 341 aa17.41■□□□□ 0.38
PPP1R3F-203ENST00000466508 SPAG16Q8N0X2 631 aa17.41■□□□□ 0.38
PPP1R3F-203ENST00000466508 OR10A7Q8NGE5 316 aa17.41■□□□□ 0.38
PPP1R3F-203ENST00000466508 SCARB1Q8WTV0 552 aa17.41■□□□□ 0.38
PPP1R3F-203ENST00000466508 LEAP2Q969E1 77 aa17.41■□□□□ 0.38
PPP1R3F-203ENST00000466508 RPUSD1Q9UJJ7 312 aaKnown RBP17.41■□□□□ 0.38
PPP1R3F-203ENST00000466508 DOPEY1Q5JWR5 2465 aa17.41■□□□□ 0.38
PPP1R3F-203ENST00000466508 LRRK2Q5S007 2527 aa17.41■□□□□ 0.38
PPP1R3F-203ENST00000466508 SLC31A2O15432 143 aa17.41■□□□□ 0.38
PPP1R3F-203ENST00000466508 PROP1O75360 226 aa17.41■□□□□ 0.38
PPP1R3F-203ENST00000466508 PITX3O75364 302 aa17.41■□□□□ 0.38
PPP1R3F-203ENST00000466508 EPHA1P21709 976 aa17.41■□□□□ 0.38
PPP1R3F-203ENST00000466508 BRWD1-AS2P59051 145 aa17.41■□□□□ 0.38
PPP1R3F-203ENST00000466508 ID3Q02535 119 aa17.41■□□□□ 0.38
PPP1R3F-203ENST00000466508 CT45A1Q5HYN5 189 aa17.41■□□□□ 0.38
PPP1R3F-203ENST00000466508 OR2B11Q5JQS5 317 aa17.41■□□□□ 0.38
PPP1R3F-203ENST00000466508 CXorf66Q5JRM2 361 aaPredicted RBP17.41■□□□□ 0.38
PPP1R3F-203ENST00000466508 PRAMEF5Q5TYX0 476 aa17.41■□□□□ 0.38
PPP1R3F-203ENST00000466508 TMEM200BQ69YZ2 307 aa17.41■□□□□ 0.38
PPP1R3F-203ENST00000466508 DMBX1Q8NFW5 382 aa17.41■□□□□ 0.38
PPP1R3F-203ENST00000466508 CT45A3Q8NHU0 189 aa17.41■□□□□ 0.38
PPP1R3F-203ENST00000466508 H1FXQ92522 213 aaKnown RBP17.41■□□□□ 0.38
PPP1R3F-203ENST00000466508 ZNF714Q96N38 554 aa17.41■□□□□ 0.38
PPP1R3F-203ENST00000466508 GSX2Q9BZM3 304 aa17.41■□□□□ 0.38
PPP1R3F-203ENST00000466508 GAB2Q9UQC2 676 aa17.41■□□□□ 0.38
PPP1R3F-203ENST00000466508 RPS10-NUDT3A0A1W2PQS6 291 aa17.4■□□□□ 0.38
PPP1R3F-203ENST00000466508 C17orf98A8MV24 154 aa17.4■□□□□ 0.38
PPP1R3F-203ENST00000466508 MMP23AO75900 390 aa17.4■□□□□ 0.38
PPP1R3F-203ENST00000466508 IGHV2-70P01814 119 aa17.4■□□□□ 0.38
PPP1R3F-203ENST00000466508 DUTP33316 252 aaKnown RBP17.4■□□□□ 0.38
PPP1R3F-203ENST00000466508 MRPS11P82912 194 aaKnown RBP17.4■□□□□ 0.38
PPP1R3F-203ENST00000466508 CLLU1Q5K131 121 aa17.4■□□□□ 0.38
PPP1R3F-203ENST00000466508 ZNF439Q8NDP4 499 aa17.4■□□□□ 0.38
PPP1R3F-203ENST00000466508 ZC4H2Q9NQZ6 224 aa17.4■□□□□ 0.38
PPP1R3F-203ENST00000466508 SPTAN1Q13813 2472 aaKnown RBP17.4■□□□□ 0.38
PPP1R3F-203ENST00000466508 P2RY1P47900 373 aa17.39■□□□□ 0.38
PPP1R3F-203ENST00000466508 POLR2GP62487 172 aaKnown RBP eCLIP17.39■□□□□ 0.38
PPP1R3F-203ENST00000466508 HEPN1Q6WQI6 88 aa17.39■□□□□ 0.38
PPP1R3F-203ENST00000466508 STOML3Q8TAV4 291 aa17.39■□□□□ 0.38
PPP1R3F-203ENST00000466508 NEU4Q8WWR8 484 aaPredicted RBP17.39■□□□□ 0.38
PPP1R3F-203ENST00000466508 C11orf1Q9H5F2 150 aa17.39■□□□□ 0.38
PPP1R3F-203ENST00000466508 CACNG5Q9UF02 275 aa17.39■□□□□ 0.38
PPP1R3F-203ENST00000466508 COL12A1Q99715 3063 aa17.39■□□□□ 0.37
PPP1R3F-203ENST00000466508 RAB14P61106 215 aa17.39■□□□□ 0.37
PPP1R3F-203ENST00000466508 ZNF816Q0VGE8 651 aaPredicted RBP17.39■□□□□ 0.37
PPP1R3F-203ENST00000466508 IZUMO4Q1ZYL8 232 aa17.39■□□□□ 0.37
PPP1R3F-203ENST00000466508 Q6ZRM9 215 aa17.39■□□□□ 0.37
PPP1R3F-203ENST00000466508 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.39■□□□□ 0.37
PPP1R3F-203ENST00000466508 CD300LFQ8TDQ1 290 aa17.39■□□□□ 0.37
PPP1R3F-203ENST00000466508 CYTL1Q9NRR1 136 aa17.39■□□□□ 0.37
PPP1R3F-203ENST00000466508 USP9XQ93008 2570 aaPredicted RBP17.39■□□□□ 0.37
PPP1R3F-203ENST00000466508 M0R1X1 148 aa17.38■□□□□ 0.37
PPP1R3F-203ENST00000466508 TAAR5O14804 337 aa17.38■□□□□ 0.37
PPP1R3F-203ENST00000466508 CCL3L1P16619 93 aa17.38■□□□□ 0.37
PPP1R3F-203ENST00000466508 PVALBP20472 110 aaPredicted RBP17.38■□□□□ 0.37
PPP1R3F-203ENST00000466508 LINC00205P59089 165 aa17.38■□□□□ 0.37
PPP1R3F-203ENST00000466508 RPL39P5Q59GN2 51 aa17.38■□□□□ 0.37
PPP1R3F-203ENST00000466508 PHYHIPLQ96FC7 376 aa17.38■□□□□ 0.37
PPP1R3F-203ENST00000466508 LAMP3Q9UQV4 416 aa17.38■□□□□ 0.37
PPP1R3F-203ENST00000466508 MMP24Q9Y5R2 645 aa17.38■□□□□ 0.37
PPP1R3F-203ENST00000466508 FLNBO75369 2602 aaKnown RBP17.38■□□□□ 0.37
PPP1R3F-203ENST00000466508 A0A1W2PPE3 182 aa17.37■□□□□ 0.37
PPP1R3F-203ENST00000466508 RAB29O14966 203 aa17.37■□□□□ 0.37
PPP1R3F-203ENST00000466508 SSSCA1O60232 199 aa17.37■□□□□ 0.37
PPP1R3F-203ENST00000466508 LY6HO94772 140 aa17.37■□□□□ 0.37
PPP1R3F-203ENST00000466508 ATG12O94817 140 aa17.37■□□□□ 0.37
PPP1R3F-203ENST00000466508 S1PR2O95136 353 aa17.37■□□□□ 0.37
PPP1R3F-203ENST00000466508 DAOP14920 347 aa17.37■□□□□ 0.37
PPP1R3F-203ENST00000466508 GPR157Q5UAW9 335 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms