RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 PAX5Q02548 391 aa11.21□□□□□ -0.61
HDAC6-214ENST00000465269 TNFRSF9Q07011 255 aa11.21□□□□□ -0.61
HDAC6-214ENST00000465269 MLLT11Q13015 90 aaPredicted RBP11.21□□□□□ -0.61
HDAC6-214ENST00000465269 GNMTQ14749 295 aa11.21□□□□□ -0.61
HDAC6-214ENST00000465269 GUCA2BQ16661 112 aa11.21□□□□□ -0.61
HDAC6-214ENST00000465269 UBE2UQ5VVX9 321 aa11.21□□□□□ -0.61
HDAC6-214ENST00000465269 ZNF660Q6AZW8 331 aaPredicted RBP11.21□□□□□ -0.61
HDAC6-214ENST00000465269 PYHIN1Q6K0P9 492 aa11.21□□□□□ -0.61
HDAC6-214ENST00000465269 CD200R1LQ6Q8B3 271 aa11.21□□□□□ -0.61
HDAC6-214ENST00000465269 UFD1Q92890 307 aa11.21□□□□□ -0.61
HDAC6-214ENST00000465269 TMEM203Q969S6 136 aa11.21□□□□□ -0.61
HDAC6-214ENST00000465269 DHDHQ9UQ10 334 aa11.21□□□□□ -0.61
HDAC6-214ENST00000465269 C13orf42A0A1B0GVH6 325 aa11.2□□□□□ -0.62
HDAC6-214ENST00000465269 A0A1W2PPK0 400 aa11.2□□□□□ -0.62
HDAC6-214ENST00000465269 CPEP16870 476 aa11.2□□□□□ -0.62
HDAC6-214ENST00000465269 RPS11P62280 158 aaKnown RBP eCLIP11.2□□□□□ -0.62
HDAC6-214ENST00000465269 TPBGQ13641 420 aa11.2□□□□□ -0.62
HDAC6-214ENST00000465269 PLGLAQ15195 96 aa11.2□□□□□ -0.62
HDAC6-214ENST00000465269 KISS1Q15726 138 aa11.2□□□□□ -0.62
HDAC6-214ENST00000465269 ODF3L1Q8IXM7 274 aa11.2□□□□□ -0.62
HDAC6-214ENST00000465269 TCTEX1D1Q8N7M0 179 aa11.2□□□□□ -0.62
HDAC6-214ENST00000465269 CCDC54Q8NEL0 328 aa11.2□□□□□ -0.62
HDAC6-214ENST00000465269 OR5T1Q8NG75 326 aa11.2□□□□□ -0.62
HDAC6-214ENST00000465269 GPR148Q8TDV2 347 aa11.2□□□□□ -0.62
HDAC6-214ENST00000465269 KCTD12Q96CX2 325 aaKnown RBP11.2□□□□□ -0.62
HDAC6-214ENST00000465269 ORAI1Q96D31 301 aa11.2□□□□□ -0.62
HDAC6-214ENST00000465269 WDR89Q96FK6 387 aaPredicted RBP11.2□□□□□ -0.62
HDAC6-214ENST00000465269 RHOFQ9HBH0 211 aa11.2□□□□□ -0.62
HDAC6-214ENST00000465269 CD1AP06126 327 aa11.19□□□□□ -0.62
HDAC6-214ENST00000465269 RPS25P62851 125 aaKnown RBP11.19□□□□□ -0.62
HDAC6-214ENST00000465269 IL13RA2Q14627 380 aa11.19□□□□□ -0.62
HDAC6-214ENST00000465269 INSL4Q14641 139 aa11.19□□□□□ -0.62
HDAC6-214ENST00000465269 YIF1BQ5BJH7 314 aa11.19□□□□□ -0.62
HDAC6-214ENST00000465269 ELP2Q6IA86 826 aa11.19□□□□□ -0.62
HDAC6-214ENST00000465269 FAM131AQ6UXB0 335 aa11.19□□□□□ -0.62
HDAC6-214ENST00000465269 FCGR1BQ92637 280 aa11.19□□□□□ -0.62
HDAC6-214ENST00000465269 GGTLC1Q9BX51 225 aa11.19□□□□□ -0.62
HDAC6-214ENST00000465269 MSGN1A6NI15 193 aa11.18□□□□□ -0.62
HDAC6-214ENST00000465269 RRHO14718 337 aa11.18□□□□□ -0.62
HDAC6-214ENST00000465269 XRCC3O43542 346 aa11.18□□□□□ -0.62
HDAC6-214ENST00000465269 OR7C1O76099 320 aaPredicted RBP11.18□□□□□ -0.62
HDAC6-214ENST00000465269 HTR3BO95264 441 aa11.18□□□□□ -0.62
HDAC6-214ENST00000465269 MT-ND4P03905 459 aa11.18□□□□□ -0.62
HDAC6-214ENST00000465269 SMIM18P0DKX4 95 aa11.18□□□□□ -0.62
HDAC6-214ENST00000465269 KCNJ3P48549 501 aa11.18□□□□□ -0.62
HDAC6-214ENST00000465269 TMEM267Q0VDI3 215 aaPredicted RBP11.18□□□□□ -0.62
HDAC6-214ENST00000465269 SSX1Q16384 188 aa11.18□□□□□ -0.62
HDAC6-214ENST00000465269 Q499Y3 187 aa11.18□□□□□ -0.62
HDAC6-214ENST00000465269 ACSM3Q53FZ2 586 aa11.18□□□□□ -0.62
HDAC6-214ENST00000465269 AKIRIN2Q53H80 203 aa11.18□□□□□ -0.62
HDAC6-214ENST00000465269 SYT6Q5T7P8 510 aaPredicted RBP11.18□□□□□ -0.62
HDAC6-214ENST00000465269 GLDNQ6ZMI3 551 aaPredicted RBP11.18□□□□□ -0.62
HDAC6-214ENST00000465269 SERPINA12Q8IW75 414 aa11.18□□□□□ -0.62
HDAC6-214ENST00000465269 MS4A15Q8N5U1 240 aa11.18□□□□□ -0.62
HDAC6-214ENST00000465269 GRPEL2Q8TAA5 225 aa11.18□□□□□ -0.62
HDAC6-214ENST00000465269 OR14A2Q96R54 314 aa11.18□□□□□ -0.62
HDAC6-214ENST00000465269 SLA2Q9H6Q3 261 aa11.18□□□□□ -0.62
HDAC6-214ENST00000465269 TRBV5-5A0A0J9YX44 114 aa11.17□□□□□ -0.62
HDAC6-214ENST00000465269 GABRPO00591 440 aa11.17□□□□□ -0.62
HDAC6-214ENST00000465269 GEMIN2O14893 280 aaKnown RBP11.17□□□□□ -0.62
HDAC6-214ENST00000465269 ORC5O43913 435 aa11.17□□□□□ -0.62
HDAC6-214ENST00000465269 RBMXL2O75526 392 aaKnown RBP11.17□□□□□ -0.62
HDAC6-214ENST00000465269 HBZP02008 142 aa11.17□□□□□ -0.62
HDAC6-214ENST00000465269 CD2P06729 351 aa11.17□□□□□ -0.62
HDAC6-214ENST00000465269 DEFB135Q30KP9 77 aa11.17□□□□□ -0.62
HDAC6-214ENST00000465269 CEACAM19Q7Z692 300 aa11.17□□□□□ -0.62
HDAC6-214ENST00000465269 POC5Q8NA72 575 aa11.17□□□□□ -0.62
HDAC6-214ENST00000465269 OR52L2PQ8NGH6 319 aa11.17□□□□□ -0.62
HDAC6-214ENST00000465269 OR5D14Q8NGL3 314 aa11.17□□□□□ -0.62
HDAC6-214ENST00000465269 OR4K15Q8NH41 348 aa11.17□□□□□ -0.62
HDAC6-214ENST00000465269 NEK7Q8TDX7 302 aa11.17□□□□□ -0.62
HDAC6-214ENST00000465269 TNFAIP8L1Q8WVP5 186 aa11.17□□□□□ -0.62
HDAC6-214ENST00000465269 MUL1Q969V5 352 aa11.17□□□□□ -0.62
HDAC6-214ENST00000465269 FAM192AQ9GZU8 254 aa11.17□□□□□ -0.62
HDAC6-214ENST00000465269 VCX3AQ9NNX9 186 aa11.17□□□□□ -0.62
HDAC6-214ENST00000465269 TAS2R4Q9NYW5 299 aa11.17□□□□□ -0.62
HDAC6-214ENST00000465269 PEF1Q9UBV8 284 aaKnown RBP11.17□□□□□ -0.62
HDAC6-214ENST00000465269 AIPO00170 330 aa11.16□□□□□ -0.62
HDAC6-214ENST00000465269 CDRT1O95170 752 aa11.16□□□□□ -0.62
HDAC6-214ENST00000465269 CA2P00918 260 aa11.16□□□□□ -0.62
HDAC6-214ENST00000465269 RCC1P18754 421 aaPredicted RBP11.16□□□□□ -0.62
HDAC6-214ENST00000465269 CD40LGP29965 261 aa11.16□□□□□ -0.62
HDAC6-214ENST00000465269 PPP1CCP36873 323 aaKnown RBP11.16□□□□□ -0.62
HDAC6-214ENST00000465269 FABP5Q01469 135 aa11.16□□□□□ -0.62
HDAC6-214ENST00000465269 RPEL1Q2QD12 228 aa11.16□□□□□ -0.62
HDAC6-214ENST00000465269 DEFB114Q30KQ6 69 aa11.16□□□□□ -0.62
HDAC6-214ENST00000465269 ATAD3CQ5T2N8 411 aa11.16□□□□□ -0.62
HDAC6-214ENST00000465269 ZNF497Q6ZNH5 498 aa11.16□□□□□ -0.62
HDAC6-214ENST00000465269 PARP16Q8N5Y8 322 aa11.16□□□□□ -0.62
HDAC6-214ENST00000465269 RNF150Q9ULK6 438 aa11.16□□□□□ -0.62
HDAC6-214ENST00000465269 ST3GAL6Q9Y274 331 aa11.16□□□□□ -0.62
HDAC6-214ENST00000465269 LOC102724200A0A096LPH7 203 aaPredicted RBP11.15□□□□□ -0.62
HDAC6-214ENST00000465269 TRBV5-7A0A0A0MS05 114 aa11.15□□□□□ -0.62
HDAC6-214ENST00000465269 NDUFB8O95169 186 aa11.15□□□□□ -0.62
HDAC6-214ENST00000465269 RSU1Q15404 277 aa11.15□□□□□ -0.62
HDAC6-214ENST00000465269 TRAM1Q15629 374 aa11.15□□□□□ -0.62
HDAC6-214ENST00000465269 Q3ZCU0 254 aa11.15□□□□□ -0.62
HDAC6-214ENST00000465269 TMEM91Q6ZNR0 172 aa11.15□□□□□ -0.62
HDAC6-214ENST00000465269 ZNF575Q86XF7 245 aa11.15□□□□□ -0.62
HDAC6-214ENST00000465269 LAX1Q8IWV1 398 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms