RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 GLYATL2Q8WU03 294 aa13.91□□□□□ -0.18
EXOSC3-203ENST00000465229 MSI2Q96DH6 328 aaKnown RBP13.91□□□□□ -0.18
EXOSC3-203ENST00000465229 MMP26Q9NRE1 261 aa13.91□□□□□ -0.18
EXOSC3-203ENST00000465229 LPAR3Q9UBY5 353 aa13.91□□□□□ -0.18
EXOSC3-203ENST00000465229 LINC00312Q9Y6C7 94 aa13.91□□□□□ -0.18
EXOSC3-203ENST00000465229 TRGV10A0A0A0MS01 117 aa13.9□□□□□ -0.18
EXOSC3-203ENST00000465229 PPIAL4CA0A0B4J2A2 164 aa13.9□□□□□ -0.18
EXOSC3-203ENST00000465229 MPTX1A8MV57 137 aa13.9□□□□□ -0.18
EXOSC3-203ENST00000465229 PPIAL4GP0DN37 164 aa13.9□□□□□ -0.18
EXOSC3-203ENST00000465229 TMEM249Q2WGJ8 235 aa13.9□□□□□ -0.18
EXOSC3-203ENST00000465229 GGNBP1Q5YKI7 109 aa13.9□□□□□ -0.18
EXOSC3-203ENST00000465229 C5orf24Q7Z6I8 188 aa13.9□□□□□ -0.18
EXOSC3-203ENST00000465229 H1FOOQ8IZA3 346 aaPredicted RBP13.9□□□□□ -0.18
EXOSC3-203ENST00000465229 OR10J5Q8NHC4 309 aa13.9□□□□□ -0.18
EXOSC3-203ENST00000465229 C18orf12Q96KH6 178 aa13.9□□□□□ -0.18
EXOSC3-203ENST00000465229 OR2W1Q9Y3N9 320 aa13.9□□□□□ -0.18
EXOSC3-203ENST00000465229 DSCAML1Q8TD84 2053 aa13.9□□□□□ -0.18
EXOSC3-203ENST00000465229 YLPM1P49750 1951 aaKnown RBP13.9□□□□□ -0.18
EXOSC3-203ENST00000465229 B4DSR2 109 aa13.9□□□□□ -0.19
EXOSC3-203ENST00000465229 H0YIZ8 118 aa13.9□□□□□ -0.19
EXOSC3-203ENST00000465229 GZMHP20718 246 aa13.9□□□□□ -0.19
EXOSC3-203ENST00000465229 IAH1Q2TAA2 248 aaPredicted RBP13.9□□□□□ -0.19
EXOSC3-203ENST00000465229 KIRREL1Q96J84 757 aa13.9□□□□□ -0.19
EXOSC3-203ENST00000465229 ZFP57Q9NU63 452 aa13.9□□□□□ -0.19
EXOSC3-203ENST00000465229 UBE2J1Q9Y385 318 aaPredicted RBP13.9□□□□□ -0.19
EXOSC3-203ENST00000465229 TMED3Q9Y3Q3 217 aa13.9□□□□□ -0.19
EXOSC3-203ENST00000465229 CR1P17927 2039 aa13.89□□□□□ -0.19
EXOSC3-203ENST00000465229 PIGBOS1A0A0B4J2F0 54 aa13.89□□□□□ -0.19
EXOSC3-203ENST00000465229 C3orf85A0A1B0GTC6 90 aa13.89□□□□□ -0.19
EXOSC3-203ENST00000465229 ANKRD34BA5PLL1 514 aa13.89□□□□□ -0.19
EXOSC3-203ENST00000465229 MSMBP08118 114 aa13.89□□□□□ -0.19
EXOSC3-203ENST00000465229 IGHV4-31P0DP07 118 aa13.89□□□□□ -0.19
EXOSC3-203ENST00000465229 CCL3L1P16619 93 aa13.89□□□□□ -0.19
EXOSC3-203ENST00000465229 NUP62P37198 522 aaPredicted RBP13.89□□□□□ -0.19
EXOSC3-203ENST00000465229 AP2S1P53680 142 aaPredicted RBP13.89□□□□□ -0.19
EXOSC3-203ENST00000465229 DLX6P56179 175 aa13.89□□□□□ -0.19
EXOSC3-203ENST00000465229 HMGN3Q15651 99 aa13.89□□□□□ -0.19
EXOSC3-203ENST00000465229 C17orf58Q2M2W7 97 aa13.89□□□□□ -0.19
EXOSC3-203ENST00000465229 CMTM1Q8IZ96 169 aa13.89□□□□□ -0.19
EXOSC3-203ENST00000465229 LINC01356Q8N9X3 169 aa13.89□□□□□ -0.19
EXOSC3-203ENST00000465229 DCUN1D4Q92564 292 aa13.89□□□□□ -0.19
EXOSC3-203ENST00000465229 PHYHIPLQ96FC7 376 aa13.89□□□□□ -0.19
EXOSC3-203ENST00000465229 TMEM56Q96MV1 263 aa13.89□□□□□ -0.19
EXOSC3-203ENST00000465229 AQP10Q96PS8 301 aa13.89□□□□□ -0.19
EXOSC3-203ENST00000465229 SLC5A7Q9GZV3 580 aa13.89□□□□□ -0.19
EXOSC3-203ENST00000465229 TMEM222Q9H0R3 208 aa13.89□□□□□ -0.19
EXOSC3-203ENST00000465229 TAF9BQ9HBM6 251 aa13.89□□□□□ -0.19
EXOSC3-203ENST00000465229 TMEM56-RWDD3S4R434 201 aa13.89□□□□□ -0.19
EXOSC3-203ENST00000465229 IGHV2-70DA0A0C4DH43 119 aa13.88□□□□□ -0.19
EXOSC3-203ENST00000465229 KBTBD11-OT1A0A1B0GTJ5 212 aa13.88□□□□□ -0.19
EXOSC3-203ENST00000465229 DUXBA0A1W2PPF3 345 aa13.88□□□□□ -0.19
EXOSC3-203ENST00000465229 C12orf77C9JDV5 145 aa13.88□□□□□ -0.19
EXOSC3-203ENST00000465229 C15orf65H3BRN8 121 aa13.88□□□□□ -0.19
EXOSC3-203ENST00000465229 SMAD7O15105 426 aaKnown RBP13.88□□□□□ -0.19
EXOSC3-203ENST00000465229 ENSAO43768 121 aaKnown RBP13.88□□□□□ -0.19
EXOSC3-203ENST00000465229 LIPFP07098 398 aa13.88□□□□□ -0.19
EXOSC3-203ENST00000465229 S100GP29377 79 aa13.88□□□□□ -0.19
EXOSC3-203ENST00000465229 SSTR5P35346 364 aa13.88□□□□□ -0.19
EXOSC3-203ENST00000465229 RAB32Q13637 225 aa13.88□□□□□ -0.19
EXOSC3-203ENST00000465229 C6orf183Q5T699 404 aa13.88□□□□□ -0.19
EXOSC3-203ENST00000465229 C11orf42Q8N5U0 333 aa13.88□□□□□ -0.19
EXOSC3-203ENST00000465229 RFESDQ8TAC1 157 aa13.88□□□□□ -0.19
EXOSC3-203ENST00000465229 UBALD1Q8TB05 177 aa13.88□□□□□ -0.19
EXOSC3-203ENST00000465229 SECTM1Q8WVN6 248 aa13.88□□□□□ -0.19
EXOSC3-203ENST00000465229 ST8SIA2Q92186 375 aa13.88□□□□□ -0.19
EXOSC3-203ENST00000465229 ARL11Q969Q4 196 aa13.88□□□□□ -0.19
EXOSC3-203ENST00000465229 ZNF714Q96N38 554 aa13.88□□□□□ -0.19
EXOSC3-203ENST00000465229 ARPC5LQ9BPX5 153 aa13.88□□□□□ -0.19
EXOSC3-203ENST00000465229 TAS2R3Q9NYW6 316 aa13.88□□□□□ -0.19
EXOSC3-203ENST00000465229 SVEP1Q4LDE5 3571 aa13.88□□□□□ -0.19
EXOSC3-203ENST00000465229 IGKV1D-13A0A0B4J2D9 117 aa13.87□□□□□ -0.19
EXOSC3-203ENST00000465229 IGKV1-13P0DP09 117 aa13.87□□□□□ -0.19
EXOSC3-203ENST00000465229 ERVFRD-1P60508 538 aa13.87□□□□□ -0.19
EXOSC3-203ENST00000465229 SP6Q3SY56 376 aa13.87□□□□□ -0.19
EXOSC3-203ENST00000465229 ZNF818PQ6ZRF7 136 aa13.87□□□□□ -0.19
EXOSC3-203ENST00000465229 BVESQ8NE79 360 aa13.87□□□□□ -0.19
EXOSC3-203ENST00000465229 LINC00574Q9H8X3 128 aa13.87□□□□□ -0.19
EXOSC3-203ENST00000465229 MED9Q9NWA0 146 aa13.87□□□□□ -0.19
EXOSC3-203ENST00000465229 CALYQ9NYX4 217 aa13.87□□□□□ -0.19
EXOSC3-203ENST00000465229 KCNIP1Q9NZI2 227 aa13.87□□□□□ -0.19
EXOSC3-203ENST00000465229 GSKIPQ9P0R6 139 aa13.87□□□□□ -0.19
EXOSC3-203ENST00000465229 ZNF729A6NN14 1252 aaPredicted RBP13.86□□□□□ -0.19
EXOSC3-203ENST00000465229 LEUTXA8MZ59 168 aa13.86□□□□□ -0.19
EXOSC3-203ENST00000465229 ARF6P62330 175 aa13.86□□□□□ -0.19
EXOSC3-203ENST00000465229 TRAT1Q6PIZ9 186 aa13.86□□□□□ -0.19
EXOSC3-203ENST00000465229 SPNS3Q6ZMD2 512 aa13.86□□□□□ -0.19
EXOSC3-203ENST00000465229 TBC1D26Q86UD7 250 aa13.86□□□□□ -0.19
EXOSC3-203ENST00000465229 PRR18Q8N4B5 295 aa13.86□□□□□ -0.19
EXOSC3-203ENST00000465229 OR1L1Q8NH94 360 aa13.86□□□□□ -0.19
EXOSC3-203ENST00000465229 STOML3Q8TAV4 291 aa13.86□□□□□ -0.19
EXOSC3-203ENST00000465229 IL22RA2Q969J5 263 aa13.86□□□□□ -0.19
EXOSC3-203ENST00000465229 TP53RKQ96S44 253 aa13.86□□□□□ -0.19
EXOSC3-203ENST00000465229 INSIG2Q9Y5U4 225 aa13.86□□□□□ -0.19
EXOSC3-203ENST00000465229 MAST4O15021 2626 aa13.86□□□□□ -0.19
EXOSC3-203ENST00000465229 TRAV20A0A0B4J274 112 aa13.86□□□□□ -0.19
EXOSC3-203ENST00000465229 A0A1W2PPH5 198 aa13.86□□□□□ -0.19
EXOSC3-203ENST00000465229 C17orf98A8MV24 154 aa13.86□□□□□ -0.19
EXOSC3-203ENST00000465229 MMP23AO75900 390 aa13.86□□□□□ -0.19
EXOSC3-203ENST00000465229 TGFAP01135 160 aa13.86□□□□□ -0.19
EXOSC3-203ENST00000465229 HBZP02008 142 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms