RNA–Protein interactions for RNA: ENST00000463936.1

RTN4R-204, Transcript of reticulon 4 receptor, humanhuman

TSL 4

Gene RTN4R, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-204ENST00000463936 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.25□□□□□ -0.61
RTN4R-204ENST00000463936 ZFP57Q9NU63 452 aa11.25□□□□□ -0.61
RTN4R-204ENST00000463936 IGKV1-6A0A0C4DH72 117 aa11.24□□□□□ -0.61
RTN4R-204ENST00000463936 NUDT19A8MXV4 375 aa11.24□□□□□ -0.61
RTN4R-204ENST00000463936 TRDCB7Z8K6 153 aa11.24□□□□□ -0.61
RTN4R-204ENST00000463936 CCL24O00175 119 aa11.24□□□□□ -0.61
RTN4R-204ENST00000463936 TXNL1O43396 289 aa11.24□□□□□ -0.61
RTN4R-204ENST00000463936 LANCL1O43813 399 aa11.24□□□□□ -0.61
RTN4R-204ENST00000463936 TMEM127O75204 238 aa11.24□□□□□ -0.61
RTN4R-204ENST00000463936 FCGR3AP08637 254 aa11.24□□□□□ -0.61
RTN4R-204ENST00000463936 CD3GP09693 182 aa11.24□□□□□ -0.61
RTN4R-204ENST00000463936 RPS19P39019 145 aaKnown RBP11.24□□□□□ -0.61
RTN4R-204ENST00000463936 LSM3P62310 102 aaKnown RBP11.24□□□□□ -0.61
RTN4R-204ENST00000463936 KIAA0141Q14154 515 aaPredicted RBP11.24□□□□□ -0.61
RTN4R-204ENST00000463936 CTF1Q16619 201 aa11.24□□□□□ -0.61
RTN4R-204ENST00000463936 IDNKQ5T6J7 187 aa11.24□□□□□ -0.61
RTN4R-204ENST00000463936 IZUMO1Q8IYV9 350 aa11.24□□□□□ -0.61
RTN4R-204ENST00000463936 RNF152Q8N8N0 203 aa11.24□□□□□ -0.61
RTN4R-204ENST00000463936 SLC25A38Q96DW6 304 aa11.24□□□□□ -0.61
RTN4R-204ENST00000463936 RITA1Q96K30 269 aa11.24□□□□□ -0.61
RTN4R-204ENST00000463936 PARP12Q9H0J9 701 aaKnown RBP11.24□□□□□ -0.61
RTN4R-204ENST00000463936 ELF5Q9UKW6 265 aaPredicted RBP11.24□□□□□ -0.61
RTN4R-204ENST00000463936 ETV7Q9Y603 341 aa11.24□□□□□ -0.61
RTN4R-204ENST00000463936 A0A075B6Q4 140 aa11.23□□□□□ -0.61
RTN4R-204ENST00000463936 ITGB1BP1O14713 200 aa11.23□□□□□ -0.61
RTN4R-204ENST00000463936 CD1BP29016 333 aa11.23□□□□□ -0.61
RTN4R-204ENST00000463936 ARL6IP1Q15041 203 aa11.23□□□□□ -0.61
RTN4R-204ENST00000463936 SRSF7Q16629 238 aaKnown RBP eCLIP11.23□□□□□ -0.61
RTN4R-204ENST00000463936 CDNFQ49AH0 187 aa11.23□□□□□ -0.61
RTN4R-204ENST00000463936 ZNF833PQ6ZTB9 187 aa11.23□□□□□ -0.61
RTN4R-204ENST00000463936 TGIF2LXQ8IUE1 241 aa11.23□□□□□ -0.61
RTN4R-204ENST00000463936 OR2AK2Q8NG84 335 aa11.23□□□□□ -0.61
RTN4R-204ENST00000463936 WWC2-AS2Q96NR7 200 aa11.23□□□□□ -0.61
RTN4R-204ENST00000463936 PRR25Q96S07 402 aa11.23□□□□□ -0.61
RTN4R-204ENST00000463936 NAA50Q9GZZ1 169 aaKnown RBP11.23□□□□□ -0.61
RTN4R-204ENST00000463936 IFI27L2Q9H2X8 130 aa11.23□□□□□ -0.61
RTN4R-204ENST00000463936 RHBDL2Q9NX52 303 aa11.23□□□□□ -0.61
RTN4R-204ENST00000463936 OR1A1Q9P1Q5 309 aa11.23□□□□□ -0.61
RTN4R-204ENST00000463936 SLC23A1Q9UHI7 598 aa11.23□□□□□ -0.61
RTN4R-204ENST00000463936 NCBP2LA6PVI3 153 aaKnown RBP11.22□□□□□ -0.61
RTN4R-204ENST00000463936 SCGNO76038 276 aa11.22□□□□□ -0.61
RTN4R-204ENST00000463936 ZBTB25P24278 435 aa11.22□□□□□ -0.61
RTN4R-204ENST00000463936 CEACAM6P40199 344 aa11.22□□□□□ -0.61
RTN4R-204ENST00000463936 MRPS15P82914 257 aaKnown RBP11.22□□□□□ -0.61
RTN4R-204ENST00000463936 PNLIPRP3Q17RR3 467 aa11.22□□□□□ -0.61
RTN4R-204ENST00000463936 ZNF260Q3ZCT1 412 aa11.22□□□□□ -0.61
RTN4R-204ENST00000463936 ASPHD1Q5U4P2 390 aa11.22□□□□□ -0.61
RTN4R-204ENST00000463936 Q6ZS49 121 aa11.22□□□□□ -0.61
RTN4R-204ENST00000463936 CROCCP3Q8IVE0 287 aa11.22□□□□□ -0.61
RTN4R-204ENST00000463936 FAM71E2Q8N5Q1 922 aa11.22□□□□□ -0.61
RTN4R-204ENST00000463936 DYNC2H1Q8NCM8 4307 aaKnown RBP11.22□□□□□ -0.61
RTN4R-204ENST00000463936 OR4A4PQ8NGN8 299 aa11.22□□□□□ -0.61
RTN4R-204ENST00000463936 S1PR3Q99500 378 aa11.22□□□□□ -0.61
RTN4R-204ENST00000463936 ZNF251Q9BRH9 671 aa11.22□□□□□ -0.61
RTN4R-204ENST00000463936 AGMATQ9BSE5 352 aa11.22□□□□□ -0.61
RTN4R-204ENST00000463936 TOLLIPQ9H0E2 274 aa11.22□□□□□ -0.61
RTN4R-204ENST00000463936 LIN7CQ9NUP9 197 aaKnown RBP11.22□□□□□ -0.61
RTN4R-204ENST00000463936 ZNF230Q9UIE0 474 aaPredicted RBP11.22□□□□□ -0.61
RTN4R-204ENST00000463936 SPATA2Q9UM82 520 aa11.22□□□□□ -0.61
RTN4R-204ENST00000463936 RYR2Q92736 4967 aa11.21□□□□□ -0.61
RTN4R-204ENST00000463936 SAA2-SAA4A0A096LPE2 208 aa11.21□□□□□ -0.61
RTN4R-204ENST00000463936 ST8SIA5O15466 376 aa11.21□□□□□ -0.61
RTN4R-204ENST00000463936 FABP7O15540 132 aa11.21□□□□□ -0.61
RTN4R-204ENST00000463936 GSTP1P09211 210 aaKnown RBP11.21□□□□□ -0.61
RTN4R-204ENST00000463936 GSTT2P0CG29 244 aa11.21□□□□□ -0.61
RTN4R-204ENST00000463936 GSTT2BP0CG30 244 aa11.21□□□□□ -0.61
RTN4R-204ENST00000463936 SAA2P0DJI9 122 aaPredicted RBP11.21□□□□□ -0.61
RTN4R-204ENST00000463936 OR3A3P47888 321 aa11.21□□□□□ -0.61
RTN4R-204ENST00000463936 NCS1P62166 190 aa11.21□□□□□ -0.61
RTN4R-204ENST00000463936 DGCR2P98153 550 aa11.21□□□□□ -0.61
RTN4R-204ENST00000463936 ARFRP1Q13795 201 aa11.21□□□□□ -0.61
RTN4R-204ENST00000463936 KIR2DS1Q14954 304 aa11.21□□□□□ -0.61
RTN4R-204ENST00000463936 HACD4Q5VWC8 232 aa11.21□□□□□ -0.61
RTN4R-204ENST00000463936 FAM71F2Q6NXP2 309 aa11.21□□□□□ -0.61
RTN4R-204ENST00000463936 TEX38Q6PEX7 206 aa11.21□□□□□ -0.61
RTN4R-204ENST00000463936 COMMD1Q8N668 190 aa11.21□□□□□ -0.61
RTN4R-204ENST00000463936 OR2T10Q8NGZ9 312 aa11.21□□□□□ -0.61
RTN4R-204ENST00000463936 MAFIPQ8WZ33 124 aa11.21□□□□□ -0.61
RTN4R-204ENST00000463936 NABP2Q9BQ15 211 aa11.21□□□□□ -0.61
RTN4R-204ENST00000463936 CABLES2Q9BTV7 478 aa11.21□□□□□ -0.61
RTN4R-204ENST00000463936 C11orf54Q9H0W9 315 aaPredicted RBP11.21□□□□□ -0.61
RTN4R-204ENST00000463936 KLK15Q9H2R5 256 aa11.21□□□□□ -0.61
RTN4R-204ENST00000463936 PIPOXQ9P0Z9 390 aa11.21□□□□□ -0.61
RTN4R-204ENST00000463936 DNAH7Q8WXX0 4024 aa11.2□□□□□ -0.62
RTN4R-204ENST00000463936 SACSQ9NZJ4 4579 aa11.2□□□□□ -0.62
RTN4R-204ENST00000463936 IGKV1D-8A0A087WSZ0 117 aa11.2□□□□□ -0.62
RTN4R-204ENST00000463936 TMEM235A6NFC5 223 aa11.2□□□□□ -0.62
RTN4R-204ENST00000463936 AP4M1O00189 453 aa11.2□□□□□ -0.62
RTN4R-204ENST00000463936 HSPA12AO43301 675 aa11.2□□□□□ -0.62
RTN4R-204ENST00000463936 DIRAS3O95661 229 aa11.2□□□□□ -0.62
RTN4R-204ENST00000463936 DTYMKP23919 212 aa11.2□□□□□ -0.62
RTN4R-204ENST00000463936 CNTFRP26992 372 aa11.2□□□□□ -0.62
RTN4R-204ENST00000463936 SLC6A1P30531 599 aa11.2□□□□□ -0.62
RTN4R-204ENST00000463936 CDX1P47902 265 aaPredicted RBP11.2□□□□□ -0.62
RTN4R-204ENST00000463936 SERPINB10P48595 397 aa11.2□□□□□ -0.62
RTN4R-204ENST00000463936 RAB25P57735 213 aa11.2□□□□□ -0.62
RTN4R-204ENST00000463936 VBP1P61758 197 aa11.2□□□□□ -0.62
RTN4R-204ENST00000463936 DCTN2Q13561 401 aaKnown RBP11.2□□□□□ -0.62
RTN4R-204ENST00000463936 IGSF11Q5DX21 431 aa11.2□□□□□ -0.62
RTN4R-204ENST00000463936 FOXRED2Q8IWF2 684 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms