RNA–Protein interactions for RNA: ENST00000463705.5

CHRNA4-202, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 5,201 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-202ENST00000463705 SYNGR3O43761 229 aa11.54□□□□□ -0.56
CHRNA4-202ENST00000463705 CRISP2P16562 243 aa11.54□□□□□ -0.56
CHRNA4-202ENST00000463705 ECSCRQ19T08 205 aa11.54□□□□□ -0.56
CHRNA4-202ENST00000463705 IMMP1LQ96LU5 166 aa11.54□□□□□ -0.56
CHRNA4-202ENST00000463705 PXMP4Q9Y6I8 212 aa11.54□□□□□ -0.56
CHRNA4-202ENST00000463705 ZNF708P17019 499 aa11.53□□□□□ -0.56
CHRNA4-202ENST00000463705 PAFAH1B2P68402 229 aa11.53□□□□□ -0.56
CHRNA4-202ENST00000463705 TIMM23BQ5SRD1 257 aa11.53□□□□□ -0.56
CHRNA4-202ENST00000463705 ATP1A1-AS1Q5TC04 95 aa11.53□□□□□ -0.56
CHRNA4-202ENST00000463705 NHLH2Q02577 135 aa11.53□□□□□ -0.56
CHRNA4-202ENST00000463705 PMS2P11Q13670 270 aa11.53□□□□□ -0.56
CHRNA4-202ENST00000463705 SLC35E4Q6ICL7 350 aa11.53□□□□□ -0.56
CHRNA4-202ENST00000463705 STARD4Q96DR4 205 aa11.53□□□□□ -0.56
CHRNA4-202ENST00000463705 PIMREGQ9BSJ6 248 aa11.53□□□□□ -0.56
CHRNA4-202ENST00000463705 CEACAM18A8MTB9 384 aa11.53□□□□□ -0.56
CHRNA4-202ENST00000463705 B9A039 149 aa11.53□□□□□ -0.56
CHRNA4-202ENST00000463705 SMPD2O60906 423 aa11.53□□□□□ -0.56
CHRNA4-202ENST00000463705 CEACAM1P13688 526 aa11.53□□□□□ -0.56
CHRNA4-202ENST00000463705 CAMPP49913 170 aa11.53□□□□□ -0.56
CHRNA4-202ENST00000463705 NHLH1Q02575 133 aa11.53□□□□□ -0.56
CHRNA4-202ENST00000463705 CLEC5AQ9NY25 188 aa11.53□□□□□ -0.56
CHRNA4-202ENST00000463705 LOC102723996A0A087X1L8 192 aa11.53□□□□□ -0.56
CHRNA4-202ENST00000463705 SHISA3A0PJX4 238 aa11.53□□□□□ -0.56
CHRNA4-202ENST00000463705 ISLRO14498 428 aa11.53□□□□□ -0.56
CHRNA4-202ENST00000463705 HLA-DRB5Q30154 266 aa11.53□□□□□ -0.56
CHRNA4-202ENST00000463705 C19orf48Q6RUI8 117 aa11.53□□□□□ -0.56
CHRNA4-202ENST00000463705 EIF4E3Q8N5X7 224 aaKnown RBP11.53□□□□□ -0.56
CHRNA4-202ENST00000463705 SCNM1Q9BWG6 230 aa11.53□□□□□ -0.56
CHRNA4-202ENST00000463705 METTL1Q9UBP6 276 aaKnown RBP11.53□□□□□ -0.56
CHRNA4-202ENST00000463705 ANKRD36A6QL64 1941 aa11.53□□□□□ -0.56
CHRNA4-202ENST00000463705 PRR19A6NJB7 356 aa11.53□□□□□ -0.56
CHRNA4-202ENST00000463705 J3QR89 54 aa11.53□□□□□ -0.56
CHRNA4-202ENST00000463705 HKR1P10072 659 aa11.53□□□□□ -0.56
CHRNA4-202ENST00000463705 NEUROG3Q9Y4Z2 214 aa11.53□□□□□ -0.56
CHRNA4-202ENST00000463705 SPTBP11277 2137 aa11.52□□□□□ -0.56
CHRNA4-202ENST00000463705 OR5AL1P0C617 328 aa11.52□□□□□ -0.56
CHRNA4-202ENST00000463705 ATP5IP56385 69 aaPredicted RBP11.52□□□□□ -0.56
CHRNA4-202ENST00000463705 RBPMS2Q6ZRY4 209 aaKnown RBP11.52□□□□□ -0.56
CHRNA4-202ENST00000463705 WDR31Q8NA23 367 aa11.52□□□□□ -0.56
CHRNA4-202ENST00000463705 FLVCR1-AS1Q8TAF5 88 aa11.52□□□□□ -0.56
CHRNA4-202ENST00000463705 TMEM186Q96B77 213 aa11.52□□□□□ -0.56
CHRNA4-202ENST00000463705 GPR146Q96CH1 333 aa11.52□□□□□ -0.56
CHRNA4-202ENST00000463705 SNRNP40Q96DI7 357 aaKnown RBP11.52□□□□□ -0.56
CHRNA4-202ENST00000463705 TM2D1Q9BX74 207 aa11.52□□□□□ -0.56
CHRNA4-202ENST00000463705 RCC1P18754 421 aaPredicted RBP11.52□□□□□ -0.57
CHRNA4-202ENST00000463705 OVCH2Q7RTZ1 564 aa11.52□□□□□ -0.57
CHRNA4-202ENST00000463705 FDCSPQ8NFU4 85 aa11.52□□□□□ -0.57
CHRNA4-202ENST00000463705 SUCLG1P53597 346 aaKnown RBP11.52□□□□□ -0.57
CHRNA4-202ENST00000463705 FAM222BQ8WU58 562 aa11.52□□□□□ -0.57
CHRNA4-202ENST00000463705 OR10C1Q96KK4 312 aa11.52□□□□□ -0.57
CHRNA4-202ENST00000463705 SIGLEC12Q96PQ1 595 aa11.52□□□□□ -0.57
CHRNA4-202ENST00000463705 hCG_38984A0A1B0GV85 526 aa11.52□□□□□ -0.57
CHRNA4-202ENST00000463705 GAMTQ14353 236 aa11.52□□□□□ -0.57
CHRNA4-202ENST00000463705 FGFRL1Q8N441 504 aa11.52□□□□□ -0.57
CHRNA4-202ENST00000463705 OR9G1Q8NH87 305 aa11.52□□□□□ -0.57
CHRNA4-202ENST00000463705 ZNF552Q9H707 407 aaPredicted RBP11.52□□□□□ -0.57
CHRNA4-202ENST00000463705 IGLV3-32A0A0A0MS00 114 aa11.51□□□□□ -0.57
CHRNA4-202ENST00000463705 KCNAB3O43448 404 aa11.51□□□□□ -0.57
CHRNA4-202ENST00000463705 GBGT1Q8N5D6 347 aa11.51□□□□□ -0.57
CHRNA4-202ENST00000463705 C5orf66Q9H5L9 145 aa11.51□□□□□ -0.57
CHRNA4-202ENST00000463705 TNFRSF19Q9NS68 423 aa11.51□□□□□ -0.57
CHRNA4-202ENST00000463705 ZIC3O60481 467 aa11.51□□□□□ -0.57
CHRNA4-202ENST00000463705 CYB5R3P00387 301 aaPredicted RBP11.51□□□□□ -0.57
CHRNA4-202ENST00000463705 CFDP00746 253 aaPredicted RBP11.51□□□□□ -0.57
CHRNA4-202ENST00000463705 RFPL3SP0C7P2 107 aa11.51□□□□□ -0.57
CHRNA4-202ENST00000463705 GFRA1P56159 465 aa11.51□□□□□ -0.57
CHRNA4-202ENST00000463705 RPS11P62280 158 aaKnown RBP eCLIP11.51□□□□□ -0.57
CHRNA4-202ENST00000463705 ZNF430Q9H8G1 570 aaPredicted RBP11.51□□□□□ -0.57
CHRNA4-202ENST00000463705 MFSD2BA6NFX1 497 aa11.51□□□□□ -0.57
CHRNA4-202ENST00000463705 OR10J1P30954 320 aa11.51□□□□□ -0.57
CHRNA4-202ENST00000463705 GLRXP35754 106 aa11.51□□□□□ -0.57
CHRNA4-202ENST00000463705 HSPE1P61604 102 aaKnown RBP11.51□□□□□ -0.57
CHRNA4-202ENST00000463705 NSUN5P2Q63ZY6 315 aa11.51□□□□□ -0.57
CHRNA4-202ENST00000463705 RHOVQ96L33 236 aa11.51□□□□□ -0.57
CHRNA4-202ENST00000463705 LPAR2Q9HBW0 351 aa11.51□□□□□ -0.57
CHRNA4-202ENST00000463705 TMEM140Q9NV12 185 aa11.51□□□□□ -0.57
CHRNA4-202ENST00000463705 UFC1Q9Y3C8 167 aa11.51□□□□□ -0.57
CHRNA4-202ENST00000463705 NYNRINQ9P2P1 1898 aaKnown RBP11.51□□□□□ -0.57
CHRNA4-202ENST00000463705 TRAV30A0A087WSZ9 112 aa11.51□□□□□ -0.57
CHRNA4-202ENST00000463705 M0R2Z0 102 aa11.51□□□□□ -0.57
CHRNA4-202ENST00000463705 RAMP1O60894 148 aa11.51□□□□□ -0.57
CHRNA4-202ENST00000463705 HSPB1P04792 205 aaKnown RBP11.51□□□□□ -0.57
CHRNA4-202ENST00000463705 MUC1P15941 1255 aaPredicted RBP11.51□□□□□ -0.57
CHRNA4-202ENST00000463705 HIST1H1BP16401 226 aaKnown RBP11.51□□□□□ -0.57
CHRNA4-202ENST00000463705 FAM87AP0C7U9 286 aa11.5□□□□□ -0.57
CHRNA4-202ENST00000463705 TMEM187Q14656 261 aa11.5□□□□□ -0.57
CHRNA4-202ENST00000463705 PCSK4Q6UW60 755 aa11.5□□□□□ -0.57
CHRNA4-202ENST00000463705 C11orf42Q8N5U0 333 aa11.5□□□□□ -0.57
CHRNA4-202ENST00000463705 SDHCQ99643 169 aaPredicted RBP11.5□□□□□ -0.57
CHRNA4-202ENST00000463705 AKIRIN1Q9H9L7 192 aaPredicted RBP11.5□□□□□ -0.57
CHRNA4-202ENST00000463705 CEBPDP49716 269 aaPredicted RBP11.5□□□□□ -0.57
CHRNA4-202ENST00000463705 SLC35B1P78383 322 aa11.5□□□□□ -0.57
CHRNA4-202ENST00000463705 ASPHD2Q6ICH7 369 aa11.5□□□□□ -0.57
CHRNA4-202ENST00000463705 CBLN2Q8IUK8 224 aa11.5□□□□□ -0.57
CHRNA4-202ENST00000463705 DYNLRB2Q8TF09 96 aa11.5□□□□□ -0.57
CHRNA4-202ENST00000463705 SMIM8Q96KF7 97 aa11.5□□□□□ -0.57
CHRNA4-202ENST00000463705 TMEM191AQ9H0A3 160 aa11.5□□□□□ -0.57
CHRNA4-202ENST00000463705 IFT22Q9H7X7 185 aa11.5□□□□□ -0.57
CHRNA4-202ENST00000463705 GREB1Q4ZG55 1949 aa11.5□□□□□ -0.57
CHRNA4-202ENST00000463705 IGHV1-69-2A0A0G2JMI3 117 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms