RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 PDCD6O75340 191 aa10.94□□□□□ -0.66
SMC1A-204ENST00000463684 SPDEFO95238 335 aa10.94□□□□□ -0.66
SMC1A-204ENST00000463684 CD7P09564 240 aa10.94□□□□□ -0.66
SMC1A-204ENST00000463684 ALDH3A2P51648 485 aa10.94□□□□□ -0.66
SMC1A-204ENST00000463684 DYRK1AQ13627 763 aa10.94□□□□□ -0.66
SMC1A-204ENST00000463684 PMS2P11Q13670 270 aa10.94□□□□□ -0.66
SMC1A-204ENST00000463684 HMGN3Q15651 99 aa10.94□□□□□ -0.66
SMC1A-204ENST00000463684 ZIK1Q3SY52 487 aaPredicted RBP10.94□□□□□ -0.66
SMC1A-204ENST00000463684 CD300EQ496F6 205 aaPredicted RBP10.94□□□□□ -0.66
SMC1A-204ENST00000463684 XAF1Q6GPH4 301 aa10.94□□□□□ -0.66
SMC1A-204ENST00000463684 SIGIRRQ6IA17 410 aa10.94□□□□□ -0.66
SMC1A-204ENST00000463684 BVESQ8NE79 360 aa10.94□□□□□ -0.66
SMC1A-204ENST00000463684 OR52I1Q8NGK6 324 aa10.94□□□□□ -0.66
SMC1A-204ENST00000463684 ABHD14BQ96IU4 210 aa10.94□□□□□ -0.66
SMC1A-204ENST00000463684 Q96M66 194 aa10.94□□□□□ -0.66
SMC1A-204ENST00000463684 OR14A2Q96R54 314 aa10.94□□□□□ -0.66
SMC1A-204ENST00000463684 TINAGL1Q9GZM7 467 aaPredicted RBP10.94□□□□□ -0.66
SMC1A-204ENST00000463684 TNCP24821 2201 aa10.94□□□□□ -0.66
SMC1A-204ENST00000463684 NUPR2A6NF83 97 aa10.93□□□□□ -0.66
SMC1A-204ENST00000463684 ZNF785A8K8V0 405 aa10.93□□□□□ -0.66
SMC1A-204ENST00000463684 TRBV12-3P01733 135 aa10.93□□□□□ -0.66
SMC1A-204ENST00000463684 ALPLP05186 524 aa10.93□□□□□ -0.66
SMC1A-204ENST00000463684 GUCA2BQ16661 112 aa10.93□□□□□ -0.66
SMC1A-204ENST00000463684 TMPRSS11AQ6ZMR5 421 aa10.93□□□□□ -0.66
SMC1A-204ENST00000463684 RPL36Q9Y3U8 105 aaKnown RBP10.93□□□□□ -0.66
SMC1A-204ENST00000463684 LIMS3P0CW19 117 aa10.92□□□□□ -0.66
SMC1A-204ENST00000463684 LIMS4P0CW20 117 aa10.92□□□□□ -0.66
SMC1A-204ENST00000463684 SNRPBP14678 240 aaKnown RBP10.92□□□□□ -0.66
SMC1A-204ENST00000463684 GABRB1P18505 474 aa10.92□□□□□ -0.66
SMC1A-204ENST00000463684 C1orf146Q5VVC0 180 aa10.92□□□□□ -0.66
SMC1A-204ENST00000463684 CDH26Q8IXH8 852 aa10.92□□□□□ -0.66
SMC1A-204ENST00000463684 DRAXINQ8NBI3 349 aaPredicted RBP10.92□□□□□ -0.66
SMC1A-204ENST00000463684 OR13C5Q8NGS8 318 aa10.92□□□□□ -0.66
SMC1A-204ENST00000463684 DYNLRB2Q8TF09 96 aa10.92□□□□□ -0.66
SMC1A-204ENST00000463684 SMIM19Q96E16 107 aa10.92□□□□□ -0.66
SMC1A-204ENST00000463684 NEDD4LQ96PU5 975 aa10.92□□□□□ -0.66
SMC1A-204ENST00000463684 MRPS18AQ9NVS2 196 aaKnown RBP10.92□□□□□ -0.66
SMC1A-204ENST00000463684 COA4Q9NYJ1 87 aa10.92□□□□□ -0.66
SMC1A-204ENST00000463684 TRAV8-7A0A075B6U6 113 aa10.91□□□□□ -0.66
SMC1A-204ENST00000463684 TRBV5-5A0A0J9YX44 114 aa10.91□□□□□ -0.66
SMC1A-204ENST00000463684 OGG1O15527 345 aa10.91□□□□□ -0.66
SMC1A-204ENST00000463684 APOA2P02652 100 aa10.91□□□□□ -0.66
SMC1A-204ENST00000463684 IGKV1-16P04430 117 aa10.91□□□□□ -0.66
SMC1A-204ENST00000463684 CAPGP40121 348 aa10.91□□□□□ -0.66
SMC1A-204ENST00000463684 DEFA5Q01523 94 aa10.91□□□□□ -0.66
SMC1A-204ENST00000463684 Q499Y3 187 aa10.91□□□□□ -0.66
SMC1A-204ENST00000463684 PDPNQ86YL7 162 aa10.91□□□□□ -0.66
SMC1A-204ENST00000463684 RPP25LQ8N5L8 163 aaKnown RBP10.91□□□□□ -0.66
SMC1A-204ENST00000463684 RHOXF1Q8NHV9 184 aa10.91□□□□□ -0.66
SMC1A-204ENST00000463684 EDARADDQ8WWZ3 215 aa10.91□□□□□ -0.66
SMC1A-204ENST00000463684 FAM46BQ96A09 425 aa10.91□□□□□ -0.66
SMC1A-204ENST00000463684 KCTD12Q96CX2 325 aaKnown RBP10.91□□□□□ -0.66
SMC1A-204ENST00000463684 CYYR1Q96J86 154 aa10.91□□□□□ -0.66
SMC1A-204ENST00000463684 FAAP24Q9BTP7 215 aa10.91□□□□□ -0.66
SMC1A-204ENST00000463684 PARP12Q9H0J9 701 aaKnown RBP10.91□□□□□ -0.66
SMC1A-204ENST00000463684 WFDC10AQ9H1F0 79 aa10.91□□□□□ -0.66
SMC1A-204ENST00000463684 CHMP1AQ9HD42 196 aaPredicted RBP10.91□□□□□ -0.66
SMC1A-204ENST00000463684 BABAM2Q9NXR7 383 aa10.91□□□□□ -0.66
SMC1A-204ENST00000463684 H3BNX3 289 aa10.9□□□□□ -0.66
SMC1A-204ENST00000463684 EI24O14681 340 aa10.9□□□□□ -0.66
SMC1A-204ENST00000463684 ITGB1BP1O14713 200 aa10.9□□□□□ -0.66
SMC1A-204ENST00000463684 CEACAM6P40199 344 aa10.9□□□□□ -0.66
SMC1A-204ENST00000463684 DEFB114Q30KQ6 69 aa10.9□□□□□ -0.66
SMC1A-204ENST00000463684 OR2G6Q5TZ20 316 aa10.9□□□□□ -0.66
SMC1A-204ENST00000463684 CEMP1Q6PRD7 247 aaPredicted RBP10.9□□□□□ -0.66
SMC1A-204ENST00000463684 SLC16A13Q7RTY0 426 aa10.9□□□□□ -0.66
SMC1A-204ENST00000463684 SETD6Q8TBK2 473 aa10.9□□□□□ -0.66
SMC1A-204ENST00000463684 PHB2Q99623 299 aa10.9□□□□□ -0.66
SMC1A-204ENST00000463684 SULT4A1Q9BR01 284 aa10.9□□□□□ -0.66
SMC1A-204ENST00000463684 OVOL2Q9BRP0 275 aa10.9□□□□□ -0.66
SMC1A-204ENST00000463684 AGMATQ9BSE5 352 aa10.9□□□□□ -0.66
SMC1A-204ENST00000463684 GHRLQ9UBU3 117 aa10.9□□□□□ -0.66
SMC1A-204ENST00000463684 ZNF221Q9UK13 617 aa10.9□□□□□ -0.66
SMC1A-204ENST00000463684 KLK5Q9Y337 293 aaPredicted RBP10.9□□□□□ -0.66
SMC1A-204ENST00000463684 A0A1W2PPK0 400 aa10.89□□□□□ -0.67
SMC1A-204ENST00000463684 ZBTB25P24278 435 aa10.89□□□□□ -0.67
SMC1A-204ENST00000463684 ETV1P50549 477 aa10.89□□□□□ -0.67
SMC1A-204ENST00000463684 PJVKQ0ZLH3 352 aa10.89□□□□□ -0.67
SMC1A-204ENST00000463684 YIF1BQ5BJH7 314 aa10.89□□□□□ -0.67
SMC1A-204ENST00000463684 ZNF383Q8NA42 475 aa10.89□□□□□ -0.67
SMC1A-204ENST00000463684 GGTLC1Q9BX51 225 aa10.89□□□□□ -0.67
SMC1A-204ENST00000463684 C11orf54Q9H0W9 315 aaPredicted RBP10.89□□□□□ -0.67
SMC1A-204ENST00000463684 FGF20Q9NP95 211 aaPredicted RBP10.89□□□□□ -0.67
SMC1A-204ENST00000463684 TECRQ9NZ01 308 aaKnown RBP10.89□□□□□ -0.67
SMC1A-204ENST00000463684 PCLOQ9Y6V0 5065 aa10.88□□□□□ -0.67
SMC1A-204ENST00000463684 NDUFB8O95169 186 aa10.88□□□□□ -0.67
SMC1A-204ENST00000463684 DCKP27707 260 aa10.88□□□□□ -0.67
SMC1A-204ENST00000463684 KIR2DS2P43631 304 aa10.88□□□□□ -0.67
SMC1A-204ENST00000463684 LINC00205P59089 165 aa10.88□□□□□ -0.67
SMC1A-204ENST00000463684 SSBP2P81877 361 aaPredicted RBP10.88□□□□□ -0.67
SMC1A-204ENST00000463684 C6orf201Q7Z4U5 140 aa10.88□□□□□ -0.67
SMC1A-204ENST00000463684 SVOPQ8N4V2 548 aa10.88□□□□□ -0.67
SMC1A-204ENST00000463684 THRSPQ92748 146 aa10.88□□□□□ -0.67
SMC1A-204ENST00000463684 LOC102724200A0A096LPH7 203 aaPredicted RBP10.87□□□□□ -0.67
SMC1A-204ENST00000463684 TRBV5-7A0A0A0MS05 114 aa10.87□□□□□ -0.67
SMC1A-204ENST00000463684 A0A0J9YWU9 116 aa10.87□□□□□ -0.67
SMC1A-204ENST00000463684 MSGN1A6NI15 193 aa10.87□□□□□ -0.67
SMC1A-204ENST00000463684 BMPR1BO00238 502 aa10.87□□□□□ -0.67
SMC1A-204ENST00000463684 PROP1O75360 226 aa10.87□□□□□ -0.67
SMC1A-204ENST00000463684 TUSC2O75896 110 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms