RNA–Protein interactions for RNA: ENST00000463446.1

EPHA4-210, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-210ENST00000463446 USF3Q68DE3 2245 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 ARID1AO14497 2285 aa6.04□□□□□ -1.44
EPHA4-210ENST00000463446 IGKV1D-8A0A087WSZ0 117 aa6.04□□□□□ -1.44
EPHA4-210ENST00000463446 A0A096LNT2 108 aa6.04□□□□□ -1.44
EPHA4-210ENST00000463446 CENPVL3A0A0U1RRI6 287 aa6.04□□□□□ -1.44
EPHA4-210ENST00000463446 M0QZK8 103 aa6.04□□□□□ -1.44
EPHA4-210ENST00000463446 NPFFO15130 113 aa6.04□□□□□ -1.44
EPHA4-210ENST00000463446 PGLYRP1O75594 196 aaPredicted RBP6.04□□□□□ -1.44
EPHA4-210ENST00000463446 TSPAN9O75954 239 aa6.04□□□□□ -1.44
EPHA4-210ENST00000463446 DUS4LO95620 317 aaKnown RBP6.04□□□□□ -1.44
EPHA4-210ENST00000463446 FGF2P09038 288 aa6.04□□□□□ -1.44
EPHA4-210ENST00000463446 OR4E1P0C645 316 aa6.04□□□□□ -1.44
EPHA4-210ENST00000463446 SRP14P37108 136 aaKnown RBP6.04□□□□□ -1.44
EPHA4-210ENST00000463446 GNG10P50151 68 aa6.04□□□□□ -1.44
EPHA4-210ENST00000463446 CCR6P51684 374 aa6.04□□□□□ -1.44
EPHA4-210ENST00000463446 IFITM3Q01628 133 aa6.04□□□□□ -1.44
EPHA4-210ENST00000463446 OXA1LQ15070 435 aa6.04□□□□□ -1.44
EPHA4-210ENST00000463446 ZNF833PQ6ZTB9 187 aa6.04□□□□□ -1.44
EPHA4-210ENST00000463446 C9orf139Q6ZV77 190 aa6.04□□□□□ -1.44
EPHA4-210ENST00000463446 TMED4Q7Z7H5 227 aa6.04□□□□□ -1.44
EPHA4-210ENST00000463446 PDPNQ86YL7 162 aa6.04□□□□□ -1.44
EPHA4-210ENST00000463446 ZNF695Q8IW36 515 aa6.04□□□□□ -1.44
EPHA4-210ENST00000463446 MRPL41Q8IXM3 137 aaKnown RBP6.04□□□□□ -1.44
EPHA4-210ENST00000463446 DRAM1Q8N682 238 aa6.04□□□□□ -1.44
EPHA4-210ENST00000463446 ZNF439Q8NDP4 499 aa6.04□□□□□ -1.44
EPHA4-210ENST00000463446 OR4D10Q8NGI6 311 aa6.04□□□□□ -1.44
EPHA4-210ENST00000463446 OR13C8Q8NGS7 320 aa6.04□□□□□ -1.44
EPHA4-210ENST00000463446 OR4S2Q8NH73 311 aa6.04□□□□□ -1.44
EPHA4-210ENST00000463446 OR5R1Q8NH85 324 aa6.04□□□□□ -1.44
EPHA4-210ENST00000463446 OSR1Q8TAX0 266 aaPredicted RBP6.04□□□□□ -1.44
EPHA4-210ENST00000463446 FLYWCH2Q96CP2 140 aaKnown RBP6.04□□□□□ -1.44
EPHA4-210ENST00000463446 RRNAD1Q96FB5 475 aaKnown RBP6.04□□□□□ -1.44
EPHA4-210ENST00000463446 TSNAXQ99598 290 aaKnown RBP6.04□□□□□ -1.44
EPHA4-210ENST00000463446 SPIN2AQ99865 258 aa6.04□□□□□ -1.44
EPHA4-210ENST00000463446 SPIN2BQ9BPZ2 258 aa6.04□□□□□ -1.44
EPHA4-210ENST00000463446 TMUB1Q9BVT8 246 aa6.04□□□□□ -1.44
EPHA4-210ENST00000463446 BEX2Q9BXY8 128 aa6.04□□□□□ -1.44
EPHA4-210ENST00000463446 C20orf85Q9H1P6 137 aa6.04□□□□□ -1.44
EPHA4-210ENST00000463446 PLEKHA2Q9HB19 425 aa6.04□□□□□ -1.44
EPHA4-210ENST00000463446 RAB18Q9NP72 206 aa6.04□□□□□ -1.44
EPHA4-210ENST00000463446 SLC2A9Q9NRM0 540 aa6.04□□□□□ -1.44
EPHA4-210ENST00000463446 SDHAF2Q9NX18 166 aa6.04□□□□□ -1.44
EPHA4-210ENST00000463446 FKBP11Q9NYL4 201 aa6.04□□□□□ -1.44
EPHA4-210ENST00000463446 OR1A1Q9P1Q5 309 aa6.04□□□□□ -1.44
EPHA4-210ENST00000463446 RNF150Q9ULK6 438 aa6.04□□□□□ -1.44
EPHA4-210ENST00000463446 TMED3Q9Y3Q3 217 aa6.04□□□□□ -1.44
EPHA4-210ENST00000463446 ASH1LQ9NR48 2969 aaKnown RBP6.04□□□□□ -1.44
EPHA4-210ENST00000463446 DOCK11Q5JSL3 2073 aa6.03□□□□□ -1.44
EPHA4-210ENST00000463446 IGHV3-43A0A0B4J1X8 118 aa6.03□□□□□ -1.44
EPHA4-210ENST00000463446 CRYM-AS1A6NIL9 109 aa6.03□□□□□ -1.44
EPHA4-210ENST00000463446 VGLL3A8MV65 326 aa6.03□□□□□ -1.44
EPHA4-210ENST00000463446 H0Y980 276 aa6.03□□□□□ -1.44
EPHA4-210ENST00000463446 H7C2Y5 167 aa6.03□□□□□ -1.44
EPHA4-210ENST00000463446 M0R1X1 148 aa6.03□□□□□ -1.44
EPHA4-210ENST00000463446 HSD17B6O14756 317 aa6.03□□□□□ -1.44
EPHA4-210ENST00000463446 SMAD7O15105 426 aaKnown RBP6.03□□□□□ -1.44
EPHA4-210ENST00000463446 SFT2D2O95562 160 aa6.03□□□□□ -1.44
EPHA4-210ENST00000463446 HLA-AP01891 365 aaKnown RBP6.03□□□□□ -1.44
EPHA4-210ENST00000463446 IGHV3-43DP0DP04 118 aa6.03□□□□□ -1.44
EPHA4-210ENST00000463446 ZNF16P17020 682 aaPredicted RBP6.03□□□□□ -1.44
EPHA4-210ENST00000463446 ZNF134P52741 427 aa6.03□□□□□ -1.44
EPHA4-210ENST00000463446 TPTE2P1Q5T6R2 138 aa6.03□□□□□ -1.44
EPHA4-210ENST00000463446 GLDNQ6ZMI3 551 aaPredicted RBP6.03□□□□□ -1.44
EPHA4-210ENST00000463446 LIAT1Q6ZQX7 453 aa6.03□□□□□ -1.44
EPHA4-210ENST00000463446 ZNF818PQ6ZRF7 136 aa6.03□□□□□ -1.44
EPHA4-210ENST00000463446 TCF23Q7RTU1 214 aa6.03□□□□□ -1.44
EPHA4-210ENST00000463446 C16orf82Q7Z2V1 217 aa6.03□□□□□ -1.44
EPHA4-210ENST00000463446 MOB3BQ86TA1 216 aa6.03□□□□□ -1.44
EPHA4-210ENST00000463446 LDLRAD3Q86YD5 345 aa6.03□□□□□ -1.44
EPHA4-210ENST00000463446 KRTAP1-3Q8IUG1 177 aa6.03□□□□□ -1.44
EPHA4-210ENST00000463446 OR5AN1Q8NGI8 311 aa6.03□□□□□ -1.44
EPHA4-210ENST00000463446 OR2T10Q8NGZ9 312 aa6.03□□□□□ -1.44
EPHA4-210ENST00000463446 OR4A5Q8NH83 315 aa6.03□□□□□ -1.44
EPHA4-210ENST00000463446 ZNF431Q8TF32 576 aaPredicted RBP6.03□□□□□ -1.44
EPHA4-210ENST00000463446 TCTEX1D2Q8WW35 142 aa6.03□□□□□ -1.44
EPHA4-210ENST00000463446 RTBDNQ9BSG5 229 aaPredicted RBP6.03□□□□□ -1.44
EPHA4-210ENST00000463446 NAA60Q9H7X0 242 aa6.03□□□□□ -1.44
EPHA4-210ENST00000463446 SIRT7Q9NRC8 400 aa6.03□□□□□ -1.44
EPHA4-210ENST00000463446 YAE1D1Q9NRH1 226 aa6.03□□□□□ -1.44
EPHA4-210ENST00000463446 CCL28Q9NRJ3 127 aa6.03□□□□□ -1.44
EPHA4-210ENST00000463446 WASHC3Q9Y3C0 194 aa6.03□□□□□ -1.44
EPHA4-210ENST00000463446 TRAV6A0A075B6T7 132 aa6.02□□□□□ -1.45
EPHA4-210ENST00000463446 A0A0A6YYJ9 748 aa6.02□□□□□ -1.45
EPHA4-210ENST00000463446 IGHV1-3A0A0C4DH29 117 aa6.02□□□□□ -1.45
EPHA4-210ENST00000463446 FAM90A9PA6NNJ1 464 aa6.02□□□□□ -1.45
EPHA4-210ENST00000463446 ODF3BA8MYP8 253 aa6.02□□□□□ -1.45
EPHA4-210ENST00000463446 RNASEK-C17orf49H0YIS7 233 aa6.02□□□□□ -1.45
EPHA4-210ENST00000463446 LY6LH3BQJ8 138 aa6.02□□□□□ -1.45
EPHA4-210ENST00000463446 ARPC1BO15143 372 aaKnown RBP6.02□□□□□ -1.45
EPHA4-210ENST00000463446 FCN3O75636 299 aa6.02□□□□□ -1.45
EPHA4-210ENST00000463446 MMP23AO75900 390 aa6.02□□□□□ -1.45
EPHA4-210ENST00000463446 ACTL6BO94805 426 aa6.02□□□□□ -1.45
EPHA4-210ENST00000463446 CDS2O95674 445 aa6.02□□□□□ -1.45
EPHA4-210ENST00000463446 MOSP00540 346 aa6.02□□□□□ -1.45
EPHA4-210ENST00000463446 RLN2P04090 185 aa6.02□□□□□ -1.45
EPHA4-210ENST00000463446 SNRNP70P08621 437 aaKnown RBP6.02□□□□□ -1.45
EPHA4-210ENST00000463446 SLC25A6P12236 298 aa6.02□□□□□ -1.45
EPHA4-210ENST00000463446 NQO2P16083 231 aa6.02□□□□□ -1.45
EPHA4-210ENST00000463446 HOXB4P17483 251 aaPredicted RBP6.02□□□□□ -1.45
EPHA4-210ENST00000463446 VDAC1P21796 283 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms