RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 AGMATQ9BSE5 352 aa6.22□□□□□ -1.41
CDC42BPA-210ENST00000462553 CABLES2Q9BTV7 478 aa6.22□□□□□ -1.41
CDC42BPA-210ENST00000462553 PLSCR3Q9NRY6 295 aa6.22□□□□□ -1.41
CDC42BPA-210ENST00000462553 ABRACLQ9P1F3 81 aa6.22□□□□□ -1.41
CDC42BPA-210ENST00000462553 SLC23A1Q9UHI7 598 aa6.22□□□□□ -1.41
CDC42BPA-210ENST00000462553 LSM4Q9Y4Z0 139 aaKnown RBP6.22□□□□□ -1.41
CDC42BPA-210ENST00000462553 A0A075B6Q4 140 aa6.21□□□□□ -1.42
CDC42BPA-210ENST00000462553 IGKV1D-8A0A087WSZ0 117 aa6.21□□□□□ -1.42
CDC42BPA-210ENST00000462553 SERPINE3A8MV23 424 aa6.21□□□□□ -1.42
CDC42BPA-210ENST00000462553 M0QZK8 103 aa6.21□□□□□ -1.42
CDC42BPA-210ENST00000462553 TXNL1O43396 289 aa6.21□□□□□ -1.42
CDC42BPA-210ENST00000462553 AIREO43918 545 aa6.21□□□□□ -1.42
CDC42BPA-210ENST00000462553 RGS11O94810 467 aa6.21□□□□□ -1.42
CDC42BPA-210ENST00000462553 CD3GP09693 182 aa6.21□□□□□ -1.42
CDC42BPA-210ENST00000462553 FAM106CPP0CH98 169 aa6.21□□□□□ -1.42
CDC42BPA-210ENST00000462553 CD1BP29016 333 aa6.21□□□□□ -1.42
CDC42BPA-210ENST00000462553 LUMP51884 338 aaPredicted RBP6.21□□□□□ -1.42
CDC42BPA-210ENST00000462553 LSM3P62310 102 aaKnown RBP6.21□□□□□ -1.42
CDC42BPA-210ENST00000462553 HES1Q14469 280 aa6.21□□□□□ -1.42
CDC42BPA-210ENST00000462553 HNF4GQ14541 408 aa6.21□□□□□ -1.42
CDC42BPA-210ENST00000462553 ZNF260Q3ZCT1 412 aa6.21□□□□□ -1.42
CDC42BPA-210ENST00000462553 IGSF11Q5DX21 431 aa6.21□□□□□ -1.42
CDC42BPA-210ENST00000462553 FAM71F2Q6NXP2 309 aa6.21□□□□□ -1.42
CDC42BPA-210ENST00000462553 Q6ZS49 121 aa6.21□□□□□ -1.42
CDC42BPA-210ENST00000462553 MOB3BQ86TA1 216 aa6.21□□□□□ -1.42
CDC42BPA-210ENST00000462553 Q8N9W7 124 aa6.21□□□□□ -1.42
CDC42BPA-210ENST00000462553 KLHL30-AS1Q8NEE0 82 aa6.21□□□□□ -1.42
CDC42BPA-210ENST00000462553 OR2AK2Q8NG84 335 aa6.21□□□□□ -1.42
CDC42BPA-210ENST00000462553 C5orf30Q96GV9 206 aa6.21□□□□□ -1.42
CDC42BPA-210ENST00000462553 RAX2Q96IS3 184 aa6.21□□□□□ -1.42
CDC42BPA-210ENST00000462553 FUNDC2Q9BWH2 189 aa6.21□□□□□ -1.42
CDC42BPA-210ENST00000462553 TOLLIPQ9H0E2 274 aa6.21□□□□□ -1.42
CDC42BPA-210ENST00000462553 C11orf54Q9H0W9 315 aaPredicted RBP6.21□□□□□ -1.42
CDC42BPA-210ENST00000462553 ATG5Q9H1Y0 275 aa6.21□□□□□ -1.42
CDC42BPA-210ENST00000462553 RHBDL2Q9NX52 303 aa6.21□□□□□ -1.42
CDC42BPA-210ENST00000462553 ZNF230Q9UIE0 474 aaPredicted RBP6.21□□□□□ -1.42
CDC42BPA-210ENST00000462553 LINC00527Q9UJ94 153 aa6.21□□□□□ -1.42
CDC42BPA-210ENST00000462553 MGAT4AQ9UM21 535 aa6.21□□□□□ -1.42
CDC42BPA-210ENST00000462553 U3KQK5 164 aa6.21□□□□□ -1.42
CDC42BPA-210ENST00000462553 METTL21EPA6NDL7 271 aa6.2□□□□□ -1.42
CDC42BPA-210ENST00000462553 TMEM235A6NFC5 223 aa6.2□□□□□ -1.42
CDC42BPA-210ENST00000462553 LINC01548A6NM66 108 aa6.2□□□□□ -1.42
CDC42BPA-210ENST00000462553 TRDCB7Z8K6 153 aa6.2□□□□□ -1.42
CDC42BPA-210ENST00000462553 FABP7O15540 132 aa6.2□□□□□ -1.42
CDC42BPA-210ENST00000462553 SSX5O60225 188 aa6.2□□□□□ -1.42
CDC42BPA-210ENST00000462553 PROP1O75360 226 aa6.2□□□□□ -1.42
CDC42BPA-210ENST00000462553 DIRAS3O95661 229 aa6.2□□□□□ -1.42
CDC42BPA-210ENST00000462553 MOSP00540 346 aa6.2□□□□□ -1.42
CDC42BPA-210ENST00000462553 IGHG2P01859 326 aa6.2□□□□□ -1.42
CDC42BPA-210ENST00000462553 GSTT2P0CG29 244 aa6.2□□□□□ -1.42
CDC42BPA-210ENST00000462553 GSTT2BP0CG30 244 aa6.2□□□□□ -1.42
CDC42BPA-210ENST00000462553 DTYMKP23919 212 aa6.2□□□□□ -1.42
CDC42BPA-210ENST00000462553 SLC6A1P30531 599 aa6.2□□□□□ -1.42
CDC42BPA-210ENST00000462553 RPS19P39019 145 aaKnown RBP6.2□□□□□ -1.42
CDC42BPA-210ENST00000462553 MYCNOSP40205 109 aa6.2□□□□□ -1.42
CDC42BPA-210ENST00000462553 SCAND1P57086 179 aa6.2□□□□□ -1.42
CDC42BPA-210ENST00000462553 NCS1P62166 190 aa6.2□□□□□ -1.42
CDC42BPA-210ENST00000462553 DGCR2P98153 550 aa6.2□□□□□ -1.42
CDC42BPA-210ENST00000462553 DCTN2Q13561 401 aaKnown RBP6.2□□□□□ -1.42
CDC42BPA-210ENST00000462553 SRSF7Q16629 238 aaKnown RBP eCLIP6.2□□□□□ -1.42
CDC42BPA-210ENST00000462553 DEFB136Q30KP8 78 aa6.2□□□□□ -1.42
CDC42BPA-210ENST00000462553 TIMM50Q3ZCQ8 353 aa6.2□□□□□ -1.42
CDC42BPA-210ENST00000462553 CDNFQ49AH0 187 aa6.2□□□□□ -1.42
CDC42BPA-210ENST00000462553 RPL39P5Q59GN2 51 aa6.2□□□□□ -1.42
CDC42BPA-210ENST00000462553 IDNKQ5T6J7 187 aa6.2□□□□□ -1.42
CDC42BPA-210ENST00000462553 FAM71E2Q8N5Q1 922 aa6.2□□□□□ -1.42
CDC42BPA-210ENST00000462553 OR4A4PQ8NGN8 299 aa6.2□□□□□ -1.42
CDC42BPA-210ENST00000462553 OR2T10Q8NGZ9 312 aa6.2□□□□□ -1.42
CDC42BPA-210ENST00000462553 CHPT1Q8WUD6 406 aa6.2□□□□□ -1.42
CDC42BPA-210ENST00000462553 NUDCD2Q8WVJ2 157 aa6.2□□□□□ -1.42
CDC42BPA-210ENST00000462553 ABHD14BQ96IU4 210 aa6.2□□□□□ -1.42
CDC42BPA-210ENST00000462553 RITA1Q96K30 269 aa6.2□□□□□ -1.42
CDC42BPA-210ENST00000462553 PRR25Q96S07 402 aa6.2□□□□□ -1.42
CDC42BPA-210ENST00000462553 MCRIP2Q9BUT9 160 aaKnown RBP6.2□□□□□ -1.42
CDC42BPA-210ENST00000462553 KRTAP9-2Q9BYQ4 174 aa6.2□□□□□ -1.42
CDC42BPA-210ENST00000462553 NAA50Q9GZZ1 169 aaKnown RBP6.2□□□□□ -1.42
CDC42BPA-210ENST00000462553 VCX3AQ9NNX9 186 aa6.2□□□□□ -1.42
CDC42BPA-210ENST00000462553 ETV7Q9Y603 341 aa6.2□□□□□ -1.42
CDC42BPA-210ENST00000462553 FRAS1Q86XX4 4008 aa6.19□□□□□ -1.42
CDC42BPA-210ENST00000462553 TRBV6-7A0A0A0MS04 114 aa6.19□□□□□ -1.42
CDC42BPA-210ENST00000462553 NUDT19A8MXV4 375 aa6.19□□□□□ -1.42
CDC42BPA-210ENST00000462553 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.19□□□□□ -1.42
CDC42BPA-210ENST00000462553 H0YJW9 148 aa6.19□□□□□ -1.42
CDC42BPA-210ENST00000462553 RAB29O14966 203 aa6.19□□□□□ -1.42
CDC42BPA-210ENST00000462553 GSTP1P09211 210 aaKnown RBP6.19□□□□□ -1.42
CDC42BPA-210ENST00000462553 NHLRC4P0CG21 123 aaPredicted RBP6.19□□□□□ -1.42
CDC42BPA-210ENST00000462553 CT45A6P0DMU7 189 aa6.19□□□□□ -1.42
CDC42BPA-210ENST00000462553 CT45A5P0DMU8 189 aa6.19□□□□□ -1.42
CDC42BPA-210ENST00000462553 CT45A7P0DMV0 189 aa6.19□□□□□ -1.42
CDC42BPA-210ENST00000462553 CNTFRP26992 372 aa6.19□□□□□ -1.42
CDC42BPA-210ENST00000462553 CEACAM6P40199 344 aa6.19□□□□□ -1.42
CDC42BPA-210ENST00000462553 ALDH3B2P48448 385 aa6.19□□□□□ -1.42
CDC42BPA-210ENST00000462553 F2RL1P55085 397 aa6.19□□□□□ -1.42
CDC42BPA-210ENST00000462553 HACD4Q5VWC8 232 aa6.19□□□□□ -1.42
CDC42BPA-210ENST00000462553 FAM131AQ6UXB0 335 aa6.19□□□□□ -1.42
CDC42BPA-210ENST00000462553 LCNL1Q6ZST4 164 aa6.19□□□□□ -1.42
CDC42BPA-210ENST00000462553 ZNF695Q8IW36 515 aa6.19□□□□□ -1.42
CDC42BPA-210ENST00000462553 STPG2Q8N412 459 aa6.19□□□□□ -1.42
CDC42BPA-210ENST00000462553 S1PR3Q99500 378 aa6.19□□□□□ -1.42
CDC42BPA-210ENST00000462553 HSPB9Q9BQS6 159 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms