RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 ZNF491Q8N8L2 437 aa14.76□□□□□ -0.05
VARS-220ENST00000461874 MINDY2Q8NBR6 621 aa14.76□□□□□ -0.05
VARS-220ENST00000461874 RNF5Q99942 180 aa14.76□□□□□ -0.05
VARS-220ENST00000461874 FBXL15Q9H469 300 aa14.76□□□□□ -0.05
VARS-220ENST00000461874 NDUFB11Q9NX14 153 aa14.76□□□□□ -0.05
VARS-220ENST00000461874 RNF150Q9ULK6 438 aa14.76□□□□□ -0.05
VARS-220ENST00000461874 RAB26Q9ULW5 256 aa14.76□□□□□ -0.05
VARS-220ENST00000461874 KCNK7Q9Y2U2 307 aa14.76□□□□□ -0.05
VARS-220ENST00000461874 H7C2Y5 167 aa14.75□□□□□ -0.05
VARS-220ENST00000461874 GSTP1P09211 210 aaKnown RBP14.75□□□□□ -0.05
VARS-220ENST00000461874 RAB9AP51151 201 aa14.75□□□□□ -0.05
VARS-220ENST00000461874 CRIP2P52943 208 aaPredicted RBP14.75□□□□□ -0.05
VARS-220ENST00000461874 OR10A3P58181 314 aa14.75□□□□□ -0.05
VARS-220ENST00000461874 CX3CL1P78423 397 aa14.75□□□□□ -0.05
VARS-220ENST00000461874 DGCR2P98153 550 aa14.75□□□□□ -0.05
VARS-220ENST00000461874 NDPQ00604 133 aa14.75□□□□□ -0.05
VARS-220ENST00000461874 C19orf54Q5BKX5 351 aa14.75□□□□□ -0.05
VARS-220ENST00000461874 OR11H1Q8NG94 326 aa14.75□□□□□ -0.05
VARS-220ENST00000461874 RAB3CQ96E17 227 aa14.75□□□□□ -0.05
VARS-220ENST00000461874 GNB4Q9HAV0 340 aa14.75□□□□□ -0.05
VARS-220ENST00000461874 VSIG4Q9Y279 399 aa14.75□□□□□ -0.05
VARS-220ENST00000461874 FBXO7Q9Y3I1 522 aa14.75□□□□□ -0.05
VARS-220ENST00000461874 TRDV1A0A1B0GX56 115 aa14.74□□□□□ -0.05
VARS-220ENST00000461874 ERICH4A6NGS2 130 aa14.74□□□□□ -0.05
VARS-220ENST00000461874 IFITM5A6NNB3 132 aa14.74□□□□□ -0.05
VARS-220ENST00000461874 I3L521 148 aa14.74□□□□□ -0.05
VARS-220ENST00000461874 FCN1O00602 326 aa14.74□□□□□ -0.05
VARS-220ENST00000461874 LUMP51884 338 aaPredicted RBP14.74□□□□□ -0.05
VARS-220ENST00000461874 RUNX1Q01196 453 aa14.74□□□□□ -0.05
VARS-220ENST00000461874 MOGAT2Q3SYC2 334 aa14.74□□□□□ -0.05
VARS-220ENST00000461874 DRAXINQ8NBI3 349 aaPredicted RBP14.74□□□□□ -0.05
VARS-220ENST00000461874 OR4A4PQ8NGN8 299 aa14.74□□□□□ -0.05
VARS-220ENST00000461874 RDH8Q9NYR8 311 aa14.74□□□□□ -0.05
VARS-220ENST00000461874 ZNF221Q9UK13 617 aa14.74□□□□□ -0.05
VARS-220ENST00000461874 RAMP3O60896 148 aa14.73□□□□□ -0.05
VARS-220ENST00000461874 CD3GP09693 182 aa14.73□□□□□ -0.05
VARS-220ENST00000461874 MYL9P24844 172 aa14.73□□□□□ -0.05
VARS-220ENST00000461874 MRPS15P82914 257 aaKnown RBP14.73□□□□□ -0.05
VARS-220ENST00000461874 PLGLAQ15195 96 aa14.73□□□□□ -0.05
VARS-220ENST00000461874 C9orf66Q5T8R8 295 aa14.73□□□□□ -0.05
VARS-220ENST00000461874 ZNF383Q8NA42 475 aa14.73□□□□□ -0.05
VARS-220ENST00000461874 OR1N2Q8NGR9 330 aa14.73□□□□□ -0.05
VARS-220ENST00000461874 OR10R2Q8NGX6 335 aa14.73□□□□□ -0.05
VARS-220ENST00000461874 TOLLIPQ9H0E2 274 aa14.73□□□□□ -0.05
VARS-220ENST00000461874 NUBP2Q9Y5Y2 271 aa14.73□□□□□ -0.05
VARS-220ENST00000461874 DNAH9Q9NYC9 4486 aa14.73□□□□□ -0.05
VARS-220ENST00000461874 SEC14L6B5MCN3 397 aa14.72□□□□□ -0.05
VARS-220ENST00000461874 RAB27BO00194 218 aa14.72□□□□□ -0.05
VARS-220ENST00000461874 FABP7O15540 132 aa14.72□□□□□ -0.05
VARS-220ENST00000461874 MRPS14O60783 128 aaKnown RBP14.72□□□□□ -0.05
VARS-220ENST00000461874 IGKV1-16P04430 117 aa14.72□□□□□ -0.05
VARS-220ENST00000461874 EGR2P11161 476 aaPredicted RBP14.72□□□□□ -0.05
VARS-220ENST00000461874 RAB3BP20337 219 aa14.72□□□□□ -0.05
VARS-220ENST00000461874 RAB6AP20340 208 aa14.72□□□□□ -0.05
VARS-220ENST00000461874 GALP22466 123 aa14.72□□□□□ -0.05
VARS-220ENST00000461874 SERPINB10P48595 397 aa14.72□□□□□ -0.05
VARS-220ENST00000461874 LINC00205P59089 165 aa14.72□□□□□ -0.05
VARS-220ENST00000461874 GABARAPL2P60520 117 aa14.72□□□□□ -0.05
VARS-220ENST00000461874 PSG5Q15238 335 aa14.72□□□□□ -0.05
VARS-220ENST00000461874 ECSCRQ19T08 205 aa14.72□□□□□ -0.05
VARS-220ENST00000461874 OR5B12Q96R08 314 aa14.72□□□□□ -0.05
VARS-220ENST00000461874 SCOCQ9UIL1 159 aa14.72□□□□□ -0.05
VARS-220ENST00000461874 SOX15O60248 233 aa14.71□□□□□ -0.05
VARS-220ENST00000461874 TFAP2AP05549 437 aa14.71□□□□□ -0.05
VARS-220ENST00000461874 FCGR3AP08637 254 aa14.71□□□□□ -0.05
VARS-220ENST00000461874 OR8U8P0C7N1 319 aa14.71□□□□□ -0.05
VARS-220ENST00000461874 GNB3P16520 340 aa14.71□□□□□ -0.05
VARS-220ENST00000461874 GADD45AP24522 165 aa14.71□□□□□ -0.05
VARS-220ENST00000461874 GNB1P62873 340 aa14.71□□□□□ -0.05
VARS-220ENST00000461874 ZNF616Q08AN1 781 aa14.71□□□□□ -0.05
VARS-220ENST00000461874 DCTN2Q13561 401 aaKnown RBP14.71□□□□□ -0.05
VARS-220ENST00000461874 ASPHD1Q5U4P2 390 aa14.71□□□□□ -0.05
VARS-220ENST00000461874 C22orf42Q6IC83 251 aa14.71□□□□□ -0.05
VARS-220ENST00000461874 ZNF562Q6V9R5 426 aa14.71□□□□□ -0.05
VARS-220ENST00000461874 TCTEX1D1Q8N7M0 179 aa14.71□□□□□ -0.05
VARS-220ENST00000461874 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.71□□□□□ -0.05
VARS-220ENST00000461874 B9D2Q9BPU9 175 aa14.71□□□□□ -0.05
VARS-220ENST00000461874 CABLES2Q9BTV7 478 aa14.71□□□□□ -0.05
VARS-220ENST00000461874 METTL1Q9UBP6 276 aaKnown RBP14.71□□□□□ -0.05
VARS-220ENST00000461874 GAB2Q9UQC2 676 aa14.71□□□□□ -0.05
VARS-220ENST00000461874 FOXA2Q9Y261 457 aaPredicted RBP14.71□□□□□ -0.05
VARS-220ENST00000461874 A0A0B4J203 849 aa14.7□□□□□ -0.06
VARS-220ENST00000461874 A0A1W2PN81 502 aa14.7□□□□□ -0.06
VARS-220ENST00000461874 M0R1X1 148 aa14.7□□□□□ -0.06
VARS-220ENST00000461874 MFNGO00587 321 aa14.7□□□□□ -0.06
VARS-220ENST00000461874 DIRAS3O95661 229 aa14.7□□□□□ -0.06
VARS-220ENST00000461874 GSTT2P0CG29 244 aa14.7□□□□□ -0.06
VARS-220ENST00000461874 GSTT2BP0CG30 244 aa14.7□□□□□ -0.06
VARS-220ENST00000461874 SNRPBP14678 240 aaKnown RBP14.7□□□□□ -0.06
VARS-220ENST00000461874 HIST1H1DP16402 221 aaKnown RBP14.7□□□□□ -0.06
VARS-220ENST00000461874 CHRNA7P36544 502 aa14.7□□□□□ -0.06
VARS-220ENST00000461874 RPS16P62249 146 aaKnown RBP14.7□□□□□ -0.06
VARS-220ENST00000461874 TMEM267Q0VDI3 215 aaPredicted RBP14.7□□□□□ -0.06
VARS-220ENST00000461874 IGSF11Q5DX21 431 aa14.7□□□□□ -0.06
VARS-220ENST00000461874 VAX1Q5SQQ9 334 aa14.7□□□□□ -0.06
VARS-220ENST00000461874 UBE2UQ5VVX9 321 aa14.7□□□□□ -0.06
VARS-220ENST00000461874 PPP1R27Q86WC6 154 aa14.7□□□□□ -0.06
VARS-220ENST00000461874 NR2C2APQ86WQ0 139 aa14.7□□□□□ -0.06
VARS-220ENST00000461874 PDPNQ86YL7 162 aa14.7□□□□□ -0.06
VARS-220ENST00000461874 ABHD5Q8WTS1 349 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms