RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 C4orf51C9J302 202 aa1.96□□□□□ -2.1
CLK1-206ENST00000461326 H3BQ85 93 aa1.96□□□□□ -2.1
CLK1-206ENST00000461326 C15orf65H3BRN8 121 aa1.96□□□□□ -2.1
CLK1-206ENST00000461326 SULT1C2O00338 296 aa1.96□□□□□ -2.1
CLK1-206ENST00000461326 ISLRO14498 428 aa1.96□□□□□ -2.1
CLK1-206ENST00000461326 TRAPPC3O43617 180 aa1.96□□□□□ -2.1
CLK1-206ENST00000461326 CALUO43852 315 aaPredicted RBP1.96□□□□□ -2.1
CLK1-206ENST00000461326 KLRC4O43908 158 aa1.96□□□□□ -2.1
CLK1-206ENST00000461326 TNFAIP8O95379 198 aa1.96□□□□□ -2.1
CLK1-206ENST00000461326 ZNF35P13682 527 aa1.96□□□□□ -2.1
CLK1-206ENST00000461326 IL9P15248 144 aa1.96□□□□□ -2.1
CLK1-206ENST00000461326 KCNE1P15382 129 aa1.96□□□□□ -2.1
CLK1-206ENST00000461326 KDELR2P33947 212 aa1.96□□□□□ -2.1
CLK1-206ENST00000461326 PLTPP55058 493 aa1.96□□□□□ -2.1
CLK1-206ENST00000461326 ARPP19P56211 112 aa1.96□□□□□ -2.1
CLK1-206ENST00000461326 RHOAP61586 193 aa1.96□□□□□ -2.1
CLK1-206ENST00000461326 TFAMQ00059 246 aaKnown RBP1.96□□□□□ -2.1
CLK1-206ENST00000461326 PAFAH1B3Q15102 231 aaKnown RBP1.96□□□□□ -2.1
CLK1-206ENST00000461326 OR10J3Q5JRS4 329 aa1.96□□□□□ -2.1
CLK1-206ENST00000461326 SPIN3Q5JUX0 258 aa1.96□□□□□ -2.1
CLK1-206ENST00000461326 AMMECR1LQ6DCA0 310 aa1.96□□□□□ -2.1
CLK1-206ENST00000461326 ZNF470Q6ECI4 717 aa1.96□□□□□ -2.1
CLK1-206ENST00000461326 ALKAL1Q6UXT8 129 aa1.96□□□□□ -2.1
CLK1-206ENST00000461326 OLIG3Q7RTU3 272 aa1.96□□□□□ -2.1
CLK1-206ENST00000461326 LYZL2Q7Z4W2 148 aa1.96□□□□□ -2.1
CLK1-206ENST00000461326 CD302Q8IX05 232 aa1.96□□□□□ -2.1
CLK1-206ENST00000461326 ZFP82Q8N141 532 aa1.96□□□□□ -2.1
CLK1-206ENST00000461326 GATD1Q8NB37 220 aa1.96□□□□□ -2.1
CLK1-206ENST00000461326 OR5AK3PQ8NH89 298 aa1.96□□□□□ -2.1
CLK1-206ENST00000461326 ANKRD36BP1Q96IX9 119 aa1.96□□□□□ -2.1
CLK1-206ENST00000461326 PGLYRP3Q96LB9 341 aa1.96□□□□□ -2.1
CLK1-206ENST00000461326 LINC01587Q99440 93 aa1.96□□□□□ -2.1
CLK1-206ENST00000461326 SHANK2-AS3Q9BTD1 123 aa1.96□□□□□ -2.1
CLK1-206ENST00000461326 UGT2B28Q9BY64 529 aa1.96□□□□□ -2.1
CLK1-206ENST00000461326 ULBP1Q9BZM6 244 aa1.96□□□□□ -2.1
CLK1-206ENST00000461326 DUSP21Q9H596 190 aa1.96□□□□□ -2.1
CLK1-206ENST00000461326 R4GN34 69 aa1.96□□□□□ -2.1
CLK1-206ENST00000461326 FRYLO94915 3013 aa1.96□□□□□ -2.1
CLK1-206ENST00000461326 PRR14LQ5THK1 2151 aa1.96□□□□□ -2.1
CLK1-206ENST00000461326 MUC3AQ02505 3323 aa1.96□□□□□ -2.1
CLK1-206ENST00000461326 PRRC2BQ5JSZ5 2229 aaKnown RBP1.95□□□□□ -2.1
CLK1-206ENST00000461326 PTPRJQ12913 1337 aa1.95□□□□□ -2.1
CLK1-206ENST00000461326 MYO9BQ13459 2157 aa1.95□□□□□ -2.1
CLK1-206ENST00000461326 MYO16Q9Y6X6 1858 aa1.95□□□□□ -2.1
CLK1-206ENST00000461326 LINC00854A0A1B0GVQ3 168 aa1.95□□□□□ -2.1
CLK1-206ENST00000461326 ZNF729A6NN14 1252 aaPredicted RBP1.95□□□□□ -2.1
CLK1-206ENST00000461326 MKRN2OSH3BPM6 223 aa1.95□□□□□ -2.1
CLK1-206ENST00000461326 LIN7AO14910 233 aaPredicted RBP1.95□□□□□ -2.1
CLK1-206ENST00000461326 SLC31A1O15431 190 aa1.95□□□□□ -2.1
CLK1-206ENST00000461326 CCL16O15467 120 aa1.95□□□□□ -2.1
CLK1-206ENST00000461326 SCN2BO60939 215 aa1.95□□□□□ -2.1
CLK1-206ENST00000461326 GPR75O95800 540 aa1.95□□□□□ -2.1
CLK1-206ENST00000461326 PDYNP01213 254 aa1.95□□□□□ -2.1
CLK1-206ENST00000461326 TNNC2P02585 160 aa1.95□□□□□ -2.1
CLK1-206ENST00000461326 GP1BAP07359 652 aa1.95□□□□□ -2.1
CLK1-206ENST00000461326 LIMS3P0CW19 117 aa1.95□□□□□ -2.1
CLK1-206ENST00000461326 LIMS4P0CW20 117 aa1.95□□□□□ -2.1
CLK1-206ENST00000461326 SPNP16150 400 aa1.95□□□□□ -2.1
CLK1-206ENST00000461326 MAGEA6P43360 314 aa1.95□□□□□ -2.1
CLK1-206ENST00000461326 HSPA13P48723 471 aa1.95□□□□□ -2.1
CLK1-206ENST00000461326 KLF3P57682 345 aaPredicted RBP1.95□□□□□ -2.1
CLK1-206ENST00000461326 RAB8AP61006 207 aa1.95□□□□□ -2.1
CLK1-206ENST00000461326 BAMBIQ13145 260 aa1.95□□□□□ -2.1
CLK1-206ENST00000461326 IHHQ14623 411 aa1.95□□□□□ -2.1
CLK1-206ENST00000461326 MMDQ15546 238 aa1.95□□□□□ -2.1
CLK1-206ENST00000461326 EXOC3L4Q17RC7 722 aa1.95□□□□□ -2.1
CLK1-206ENST00000461326 LGALSLQ3ZCW2 172 aaPredicted RBP1.95□□□□□ -2.1
CLK1-206ENST00000461326 ZNF660Q6AZW8 331 aaPredicted RBP1.95□□□□□ -2.1
CLK1-206ENST00000461326 MTERF4Q7Z6M4 381 aaKnown RBP1.95□□□□□ -2.1
CLK1-206ENST00000461326 NIT1Q86X76 327 aa1.95□□□□□ -2.1
CLK1-206ENST00000461326 CRLF3Q8IUI8 442 aa1.95□□□□□ -2.1
CLK1-206ENST00000461326 ZNF664Q8N3J9 261 aa1.95□□□□□ -2.1
CLK1-206ENST00000461326 OR5B17Q8NGF7 314 aa1.95□□□□□ -2.1
CLK1-206ENST00000461326 CMBLQ96DG6 245 aa1.95□□□□□ -2.1
CLK1-206ENST00000461326 TVP23CQ96ET8 276 aa1.95□□□□□ -2.1
CLK1-206ENST00000461326 TAPBPLQ9BX59 468 aa1.95□□□□□ -2.1
CLK1-206ENST00000461326 ZNF436Q9C0F3 470 aaPredicted RBP1.95□□□□□ -2.1
CLK1-206ENST00000461326 SPACA1Q9HBV2 294 aa1.95□□□□□ -2.1
CLK1-206ENST00000461326 ASF1BQ9NVP2 202 aa1.95□□□□□ -2.1
CLK1-206ENST00000461326 POMPQ9Y244 141 aa1.95□□□□□ -2.1
CLK1-206ENST00000461326 ICOSQ9Y6W8 199 aa1.95□□□□□ -2.1
CLK1-206ENST00000461326 URGCP-MRPS24S4R325 110 aa1.95□□□□□ -2.1
CLK1-206ENST00000461326 MYH10P35580 1976 aa1.95□□□□□ -2.1
CLK1-206ENST00000461326 CLUHO75153 1309 aa1.94□□□□□ -2.1
CLK1-206ENST00000461326 ZNF638Q14966 1978 aaKnown RBP1.94□□□□□ -2.1
CLK1-206ENST00000461326 WDR87Q6ZQQ6 2873 aa1.94□□□□□ -2.1
CLK1-206ENST00000461326 PTPRDP23468 1912 aa1.94□□□□□ -2.1
CLK1-206ENST00000461326 IGKV1OR2-108A0A075B7D4 117 aa1.94□□□□□ -2.1
CLK1-206ENST00000461326 PIRO00625 290 aa1.94□□□□□ -2.1
CLK1-206ENST00000461326 CETN3O15182 167 aa1.94□□□□□ -2.1
CLK1-206ENST00000461326 HCRTO43612 131 aa1.94□□□□□ -2.1
CLK1-206ENST00000461326 SYNGR1O43759 233 aa1.94□□□□□ -2.1
CLK1-206ENST00000461326 KLHL2O95198 593 aa1.94□□□□□ -2.1
CLK1-206ENST00000461326 IGLV6-57P01721 117 aa1.94□□□□□ -2.1
CLK1-206ENST00000461326 HLA-DRAP01903 254 aa1.94□□□□□ -2.1
CLK1-206ENST00000461326 CD34P28906 385 aa1.94□□□□□ -2.1
CLK1-206ENST00000461326 FOXA1P55317 472 aa1.94□□□□□ -2.1
CLK1-206ENST00000461326 OR10A3P58181 314 aa1.94□□□□□ -2.1
CLK1-206ENST00000461326 MYL6P60660 151 aa1.94□□□□□ -2.1
CLK1-206ENST00000461326 SNRPFP62306 86 aaKnown RBP1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms