RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 SCGNO76038 276 aa13.33□□□□□ -0.28
TOP3A-202ENST00000461127 IGF1P05019 195 aa13.33□□□□□ -0.28
TOP3A-202ENST00000461127 TNFSF8P32971 234 aa13.33□□□□□ -0.28
TOP3A-202ENST00000461127 GNB1P62873 340 aa13.33□□□□□ -0.28
TOP3A-202ENST00000461127 LTC4SQ16873 150 aa13.33□□□□□ -0.28
TOP3A-202ENST00000461127 LINC00299Q6ZSB3 139 aa13.33□□□□□ -0.28
TOP3A-202ENST00000461127 Q8N6K4 173 aa13.33□□□□□ -0.28
TOP3A-202ENST00000461127 ZNF491Q8N8L2 437 aa13.33□□□□□ -0.28
TOP3A-202ENST00000461127 OR8H1Q8NGG4 311 aa13.33□□□□□ -0.28
TOP3A-202ENST00000461127 S1PR3Q99500 378 aa13.33□□□□□ -0.28
TOP3A-202ENST00000461127 TSC22D3Q99576 134 aa13.33□□□□□ -0.28
TOP3A-202ENST00000461127 DIABLOQ9NR28 239 aa13.33□□□□□ -0.28
TOP3A-202ENST00000461127 EXTL2Q9UBQ6 330 aa13.33□□□□□ -0.28
TOP3A-202ENST00000461127 MEIKINA0A087WXM9 373 aa13.32□□□□□ -0.28
TOP3A-202ENST00000461127 SLC33A1O00400 549 aaPredicted RBP13.32□□□□□ -0.28
TOP3A-202ENST00000461127 DEGS1O15121 323 aa13.32□□□□□ -0.28
TOP3A-202ENST00000461127 OR8U9P0C7N5 309 aa13.32□□□□□ -0.28
TOP3A-202ENST00000461127 REG1BP48304 166 aa13.32□□□□□ -0.28
TOP3A-202ENST00000461127 SPANXN2Q5MJ10 180 aa13.32□□□□□ -0.28
TOP3A-202ENST00000461127 CNIH2Q6PI25 160 aa13.32□□□□□ -0.28
TOP3A-202ENST00000461127 OR56B1Q8NGI3 324 aa13.32□□□□□ -0.28
TOP3A-202ENST00000461127 OR4C12Q96R67 309 aa13.32□□□□□ -0.28
TOP3A-202ENST00000461127 HSPB9Q9BQS6 159 aa13.32□□□□□ -0.28
TOP3A-202ENST00000461127 LPAR5Q9H1C0 372 aa13.32□□□□□ -0.28
TOP3A-202ENST00000461127 C19orf73Q9NVV2 129 aa13.32□□□□□ -0.28
TOP3A-202ENST00000461127 ST3GAL6Q9Y274 331 aa13.32□□□□□ -0.28
TOP3A-202ENST00000461127 SLC25A17O43808 307 aa13.31□□□□□ -0.28
TOP3A-202ENST00000461127 MOSP00540 346 aa13.31□□□□□ -0.28
TOP3A-202ENST00000461127 CGB3P0DN86 165 aa13.31□□□□□ -0.28
TOP3A-202ENST00000461127 CGB7P0DN87 165 aa13.31□□□□□ -0.28
TOP3A-202ENST00000461127 RBM11P57052 281 aaKnown RBP13.31□□□□□ -0.28
TOP3A-202ENST00000461127 PIGYQ3MUY2 71 aa13.31□□□□□ -0.28
TOP3A-202ENST00000461127 RAB12Q6IQ22 244 aa13.31□□□□□ -0.28
TOP3A-202ENST00000461127 ACSM6Q6P461 480 aa13.31□□□□□ -0.28
TOP3A-202ENST00000461127 OR10A7Q8NGE5 316 aa13.31□□□□□ -0.28
TOP3A-202ENST00000461127 OR13A1Q8NGR1 328 aa13.31□□□□□ -0.28
TOP3A-202ENST00000461127 S100ZQ8WXG8 99 aa13.31□□□□□ -0.28
TOP3A-202ENST00000461127 DLX4Q92988 240 aaPredicted RBP13.31□□□□□ -0.28
TOP3A-202ENST00000461127 Q96M66 194 aa13.31□□□□□ -0.28
TOP3A-202ENST00000461127 NICN1Q9BSH3 213 aa13.31□□□□□ -0.28
TOP3A-202ENST00000461127 TM2D1Q9BX74 207 aa13.31□□□□□ -0.28
TOP3A-202ENST00000461127 KLK15Q9H2R5 256 aa13.31□□□□□ -0.28
TOP3A-202ENST00000461127 LINC00574Q9H8X3 128 aa13.31□□□□□ -0.28
TOP3A-202ENST00000461127 PLSCR3Q9NRY6 295 aa13.31□□□□□ -0.28
TOP3A-202ENST00000461127 TNCP24821 2201 aa13.31□□□□□ -0.28
TOP3A-202ENST00000461127 A0A0A6YYH2 397 aa13.3□□□□□ -0.28
TOP3A-202ENST00000461127 FABP12A6NFH5 140 aa13.3□□□□□ -0.28
TOP3A-202ENST00000461127 A6NJ64 397 aa13.3□□□□□ -0.28
TOP3A-202ENST00000461127 LINC01619G3V211 115 aa13.3□□□□□ -0.28
TOP3A-202ENST00000461127 CD1BP29016 333 aa13.3□□□□□ -0.28
TOP3A-202ENST00000461127 PITPNAQ00169 270 aa13.3□□□□□ -0.28
TOP3A-202ENST00000461127 LSAMPQ13449 338 aa13.3□□□□□ -0.28
TOP3A-202ENST00000461127 KIAA0141Q14154 515 aaPredicted RBP13.3□□□□□ -0.28
TOP3A-202ENST00000461127 IL13RA2Q14627 380 aa13.3□□□□□ -0.28
TOP3A-202ENST00000461127 NHLRC3Q5JS37 347 aa13.3□□□□□ -0.28
TOP3A-202ENST00000461127 TMEM69Q5SWH9 247 aa13.3□□□□□ -0.28
TOP3A-202ENST00000461127 Q6P435 159 aa13.3□□□□□ -0.28
TOP3A-202ENST00000461127 FAM131AQ6UXB0 335 aa13.3□□□□□ -0.28
TOP3A-202ENST00000461127 LINC00596Q86U02 117 aa13.3□□□□□ -0.28
TOP3A-202ENST00000461127 RFESDQ8TAC1 157 aa13.3□□□□□ -0.28
TOP3A-202ENST00000461127 NCOR1P1Q9H4R4 102 aa13.3□□□□□ -0.28
TOP3A-202ENST00000461127 ZNF107Q9UII5 783 aaPredicted RBP13.3□□□□□ -0.28
TOP3A-202ENST00000461127 KIF25Q9UIL4 384 aa13.3□□□□□ -0.28
TOP3A-202ENST00000461127 A0A1W2PPE3 182 aa13.29□□□□□ -0.28
TOP3A-202ENST00000461127 FAM90A10PA6NDY2 464 aa13.29□□□□□ -0.28
TOP3A-202ENST00000461127 FAM90A7PA6NKC0 464 aa13.29□□□□□ -0.28
TOP3A-202ENST00000461127 FAM90A23PA8MXZ1 464 aa13.29□□□□□ -0.28
TOP3A-202ENST00000461127 NPIPB11E5RHQ5 1161 aa13.29□□□□□ -0.28
TOP3A-202ENST00000461127 GEMIN2O14893 280 aaKnown RBP13.29□□□□□ -0.28
TOP3A-202ENST00000461127 HSPA12AO43301 675 aa13.29□□□□□ -0.28
TOP3A-202ENST00000461127 OR7C1O76099 320 aaPredicted RBP13.29□□□□□ -0.28
TOP3A-202ENST00000461127 BLVRBP30043 206 aaPredicted RBP13.29□□□□□ -0.28
TOP3A-202ENST00000461127 SLURP1P55000 103 aa13.29□□□□□ -0.28
TOP3A-202ENST00000461127 IL18Q14116 193 aa13.29□□□□□ -0.28
TOP3A-202ENST00000461127 FAM53AQ6NSI3 398 aaPredicted RBP13.29□□□□□ -0.28
TOP3A-202ENST00000461127 CCDC190Q86UF4 302 aa13.29□□□□□ -0.28
TOP3A-202ENST00000461127 Q8N1Y9 231 aa13.29□□□□□ -0.28
TOP3A-202ENST00000461127 OR10R2Q8NGX6 335 aa13.29□□□□□ -0.28
TOP3A-202ENST00000461127 ARPC1AQ92747 370 aa13.29□□□□□ -0.28
TOP3A-202ENST00000461127 NEDD4LQ96PU5 975 aa13.29□□□□□ -0.28
TOP3A-202ENST00000461127 RABL2AQ9UBK7 228 aaPredicted RBP13.29□□□□□ -0.28
TOP3A-202ENST00000461127 RABL2BQ9UNT1 228 aa13.29□□□□□ -0.28
TOP3A-202ENST00000461127 MRPS7Q9Y2R9 242 aaKnown RBP13.29□□□□□ -0.28
TOP3A-202ENST00000461127 TRAV18A0A075B6X5 111 aa13.28□□□□□ -0.28
TOP3A-202ENST00000461127 A0A0A6YYD4 124 aa13.28□□□□□ -0.28
TOP3A-202ENST00000461127 HSPB6O14558 160 aa13.28□□□□□ -0.28
TOP3A-202ENST00000461127 XRCC3O43542 346 aa13.28□□□□□ -0.28
TOP3A-202ENST00000461127 IL3RAP26951 378 aa13.28□□□□□ -0.28
TOP3A-202ENST00000461127 RAB9AP51151 201 aa13.28□□□□□ -0.28
TOP3A-202ENST00000461127 HAGHQ16775 308 aa13.28□□□□□ -0.28
TOP3A-202ENST00000461127 MPV17LQ2QL34 196 aa13.28□□□□□ -0.28
TOP3A-202ENST00000461127 PAN3Q58A45 887 aaKnown RBP13.28□□□□□ -0.28
TOP3A-202ENST00000461127 ATAD3CQ5T2N8 411 aa13.28□□□□□ -0.28
TOP3A-202ENST00000461127 FAM89BQ8N5H3 189 aa13.28□□□□□ -0.28
TOP3A-202ENST00000461127 MRGPRDQ8TDS7 321 aa13.28□□□□□ -0.28
TOP3A-202ENST00000461127 C15orf40Q8WUR7 153 aa13.28□□□□□ -0.28
TOP3A-202ENST00000461127 RAB3CQ96E17 227 aa13.28□□□□□ -0.28
TOP3A-202ENST00000461127 SPACA1Q9HBV2 294 aa13.28□□□□□ -0.28
TOP3A-202ENST00000461127 WSB1Q9Y6I7 421 aa13.28□□□□□ -0.28
TOP3A-202ENST00000461127 ALMS1Q8TCU4 4167 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms