RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 LIN54Q6MZP7 749 aa18.08■□□□□ 0.48
PTPN4-208ENST00000460289 RNF5Q99942 180 aa18.08■□□□□ 0.48
PTPN4-208ENST00000460289 CABLES2Q9BTV7 478 aa18.08■□□□□ 0.48
PTPN4-208ENST00000460289 VCX3AQ9NNX9 186 aa18.08■□□□□ 0.48
PTPN4-208ENST00000460289 ZNF230Q9UIE0 474 aaPredicted RBP18.08■□□□□ 0.48
PTPN4-208ENST00000460289 WASHC3Q9Y3C0 194 aa18.08■□□□□ 0.48
PTPN4-208ENST00000460289 A0A087WXM4 84 aa18.07■□□□□ 0.48
PTPN4-208ENST00000460289 TRBV6-7A0A0A0MS04 114 aa18.07■□□□□ 0.48
PTPN4-208ENST00000460289 H0YJW9 148 aa18.07■□□□□ 0.48
PTPN4-208ENST00000460289 NDUFA3O95167 84 aa18.07■□□□□ 0.48
PTPN4-208ENST00000460289 TNFAIP8O95379 198 aa18.07■□□□□ 0.48
PTPN4-208ENST00000460289 ELANEP08246 267 aa18.07■□□□□ 0.48
PTPN4-208ENST00000460289 GSTP1P09211 210 aaKnown RBP18.07■□□□□ 0.48
PTPN4-208ENST00000460289 CNTFRP26992 372 aa18.07■□□□□ 0.48
PTPN4-208ENST00000460289 SCAND1P57086 179 aa18.07■□□□□ 0.48
PTPN4-208ENST00000460289 MXD1Q05195 221 aa18.07■□□□□ 0.48
PTPN4-208ENST00000460289 FOXE3Q13461 319 aa18.07■□□□□ 0.48
PTPN4-208ENST00000460289 TIMM50Q3ZCQ8 353 aa18.07■□□□□ 0.48
PTPN4-208ENST00000460289 CXorf66Q5JRM2 361 aaPredicted RBP18.07■□□□□ 0.48
PTPN4-208ENST00000460289 GLDNQ6ZMI3 551 aaPredicted RBP18.07■□□□□ 0.48
PTPN4-208ENST00000460289 Q6ZS49 121 aa18.07■□□□□ 0.48
PTPN4-208ENST00000460289 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.07■□□□□ 0.48
PTPN4-208ENST00000460289 GAB2Q9UQC2 676 aa18.07■□□□□ 0.48
PTPN4-208ENST00000460289 NUDT19A8MXV4 375 aa18.06■□□□□ 0.48
PTPN4-208ENST00000460289 SNRPBP14678 240 aaKnown RBP18.06■□□□□ 0.48
PTPN4-208ENST00000460289 DTYMKP23919 212 aa18.06■□□□□ 0.48
PTPN4-208ENST00000460289 HACD4Q5VWC8 232 aa18.06■□□□□ 0.48
PTPN4-208ENST00000460289 TSPAN14Q8NG11 270 aa18.06■□□□□ 0.48
PTPN4-208ENST00000460289 MAFIPQ8WZ33 124 aa18.06■□□□□ 0.48
PTPN4-208ENST00000460289 OR51J1Q9H342 316 aa18.06■□□□□ 0.48
PTPN4-208ENST00000460289 RNF167Q9H6Y7 350 aa18.06■□□□□ 0.48
PTPN4-208ENST00000460289 NOTCH3Q9UM47 2321 aa18.06■□□□□ 0.48
PTPN4-208ENST00000460289 PROP1O75360 226 aa18.05■□□□□ 0.48
PTPN4-208ENST00000460289 IGHG4P01861 327 aa18.05■□□□□ 0.48
PTPN4-208ENST00000460289 TFAP2AP05549 437 aa18.05■□□□□ 0.48
PTPN4-208ENST00000460289 PITPNAQ00169 270 aa18.05■□□□□ 0.48
PTPN4-208ENST00000460289 ZNF695Q8IW36 515 aa18.05■□□□□ 0.48
PTPN4-208ENST00000460289 DRAXINQ8NBI3 349 aaPredicted RBP18.05■□□□□ 0.48
PTPN4-208ENST00000460289 LGALS14Q8TCE9 139 aa18.05■□□□□ 0.48
PTPN4-208ENST00000460289 GINS4Q9BRT9 223 aa18.05■□□□□ 0.48
PTPN4-208ENST00000460289 DCSTAMPQ9H295 470 aa18.05■□□□□ 0.48
PTPN4-208ENST00000460289 ETV7Q9Y603 341 aa18.05■□□□□ 0.48
PTPN4-208ENST00000460289 RRHO14718 337 aa18.04■□□□□ 0.48
PTPN4-208ENST00000460289 TMEM127O75204 238 aa18.04■□□□□ 0.48
PTPN4-208ENST00000460289 DUS4LO95620 317 aaKnown RBP18.04■□□□□ 0.48
PTPN4-208ENST00000460289 CLEC2LP0C7M8 214 aa18.04■□□□□ 0.48
PTPN4-208ENST00000460289 OR8U9P0C7N5 309 aa18.04■□□□□ 0.48
PTPN4-208ENST00000460289 CFHR3Q02985 330 aa18.04■□□□□ 0.48
PTPN4-208ENST00000460289 IDNKQ5T6J7 187 aa18.04■□□□□ 0.48
PTPN4-208ENST00000460289 RNF152Q8N8N0 203 aa18.04■□□□□ 0.48
PTPN4-208ENST00000460289 KLHL30-AS1Q8NEE0 82 aa18.04■□□□□ 0.48
PTPN4-208ENST00000460289 OR8U1Q8NH10 309 aa18.04■□□□□ 0.48
PTPN4-208ENST00000460289 RCC1LQ96I51 464 aaKnown RBP18.04■□□□□ 0.48
PTPN4-208ENST00000460289 RHBDL2Q9NX52 303 aa18.04■□□□□ 0.48
PTPN4-208ENST00000460289 ELF5Q9UKW6 265 aaPredicted RBP18.04■□□□□ 0.48
PTPN4-208ENST00000460289 RBM7Q9Y580 266 aaKnown RBP18.04■□□□□ 0.48
PTPN4-208ENST00000460289 IGHV7-81A0A0B4J1V7 117 aa18.03■□□□□ 0.48
PTPN4-208ENST00000460289 APOA2P02652 100 aa18.03■□□□□ 0.48
PTPN4-208ENST00000460289 RPLP1P05386 114 aaKnown RBP18.03■□□□□ 0.48
PTPN4-208ENST00000460289 IGLL1P15814 213 aa18.03■□□□□ 0.48
PTPN4-208ENST00000460289 MYCNOSP40205 109 aa18.03■□□□□ 0.48
PTPN4-208ENST00000460289 CDX1P47902 265 aaPredicted RBP18.03■□□□□ 0.48
PTPN4-208ENST00000460289 THBS3P49746 956 aa18.03■□□□□ 0.48
PTPN4-208ENST00000460289 PLGLAQ15195 96 aa18.03■□□□□ 0.48
PTPN4-208ENST00000460289 ZNF660Q6AZW8 331 aaPredicted RBP18.03■□□□□ 0.48
PTPN4-208ENST00000460289 C8orf86Q6ZUL3 223 aa18.03■□□□□ 0.48
PTPN4-208ENST00000460289 REC114Q7Z4M0 266 aa18.03■□□□□ 0.48
PTPN4-208ENST00000460289 ZNF383Q8NA42 475 aa18.03■□□□□ 0.48
PTPN4-208ENST00000460289 ST6GALNAC5Q9BVH7 336 aa18.03■□□□□ 0.48
PTPN4-208ENST00000460289 M0R1X1 148 aa18.02■□□□□ 0.48
PTPN4-208ENST00000460289 CTXN2P0C2S0 81 aa18.02■□□□□ 0.48
PTPN4-208ENST00000460289 GNG2P59768 71 aa18.02■□□□□ 0.48
PTPN4-208ENST00000460289 ZNF260Q3ZCT1 412 aa18.02■□□□□ 0.48
PTPN4-208ENST00000460289 PDPNQ86YL7 162 aa18.02■□□□□ 0.48
PTPN4-208ENST00000460289 CROCCP3Q8IVE0 287 aa18.02■□□□□ 0.48
PTPN4-208ENST00000460289 MRPL41Q8IXM3 137 aaKnown RBP18.02■□□□□ 0.48
PTPN4-208ENST00000460289 TSNAXQ99598 290 aaKnown RBP18.02■□□□□ 0.48
PTPN4-208ENST00000460289 OR2D2Q9H210 308 aa18.02■□□□□ 0.48
PTPN4-208ENST00000460289 FBXL15Q9H469 300 aa18.02■□□□□ 0.48
PTPN4-208ENST00000460289 PARP11Q9NR21 331 aa18.02■□□□□ 0.48
PTPN4-208ENST00000460289 ATP6V0E1O15342 81 aa18.01■□□□□ 0.47
PTPN4-208ENST00000460289 AIREO43918 545 aa18.01■□□□□ 0.47
PTPN4-208ENST00000460289 RPS16P62249 146 aaKnown RBP18.01■□□□□ 0.47
PTPN4-208ENST00000460289 TAGLNQ01995 201 aaKnown RBP18.01■□□□□ 0.47
PTPN4-208ENST00000460289 C18orf65Q6ZTR6 163 aa18.01■□□□□ 0.47
PTPN4-208ENST00000460289 LINC00482Q8N8I6 264 aa18.01■□□□□ 0.47
PTPN4-208ENST00000460289 FLYWCH2Q96CP2 140 aaKnown RBP18.01■□□□□ 0.47
PTPN4-208ENST00000460289 NECAP2Q9NVZ3 263 aa18.01■□□□□ 0.47
PTPN4-208ENST00000460289 SDHAF2Q9NX18 166 aa18.01■□□□□ 0.47
PTPN4-208ENST00000460289 WSB1Q9Y6I7 421 aa18.01■□□□□ 0.47
PTPN4-208ENST00000460289 IGKV1D-8A0A087WSZ0 117 aa18■□□□□ 0.47
PTPN4-208ENST00000460289 A0A0A6YYH2 397 aa18■□□□□ 0.47
PTPN4-208ENST00000460289 TRAV41A0A0B4J266 112 aa18■□□□□ 0.47
PTPN4-208ENST00000460289 TMEM235A6NFC5 223 aa18■□□□□ 0.47
PTPN4-208ENST00000460289 A6NJ64 397 aa18■□□□□ 0.47
PTPN4-208ENST00000460289 PSMB8P28062 276 aa18■□□□□ 0.47
PTPN4-208ENST00000460289 PPIFP30405 207 aaKnown RBP18■□□□□ 0.47
PTPN4-208ENST00000460289 PSG5Q15238 335 aa18■□□□□ 0.47
PTPN4-208ENST00000460289 TMEM65Q6PI78 240 aa18■□□□□ 0.47
PTPN4-208ENST00000460289 ETV3LQ6ZN32 361 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms