RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 KIAA1456Q9P272 454 aa12.67□□□□□ -0.38
COL7A1-203ENST00000459756 DAPK2Q9UIK4 370 aa12.67□□□□□ -0.38
COL7A1-203ENST00000459756 ZNF221Q9UK13 617 aa12.67□□□□□ -0.38
COL7A1-203ENST00000459756 A0A075B6Q4 140 aa12.66□□□□□ -0.38
COL7A1-203ENST00000459756 NUDT19A8MXV4 375 aa12.66□□□□□ -0.38
COL7A1-203ENST00000459756 DIRAS3O95661 229 aa12.66□□□□□ -0.38
COL7A1-203ENST00000459756 ELANEP08246 267 aa12.66□□□□□ -0.38
COL7A1-203ENST00000459756 OR5H8P0DN80 308 aa12.66□□□□□ -0.38
COL7A1-203ENST00000459756 CNTFRP26992 372 aa12.66□□□□□ -0.38
COL7A1-203ENST00000459756 VBP1P61758 197 aa12.66□□□□□ -0.38
COL7A1-203ENST00000459756 C5orf64Q2M2E5 130 aa12.66□□□□□ -0.38
COL7A1-203ENST00000459756 CXorf66Q5JRM2 361 aaPredicted RBP12.66□□□□□ -0.38
COL7A1-203ENST00000459756 ZNF695Q8IW36 515 aa12.66□□□□□ -0.38
COL7A1-203ENST00000459756 RNF152Q8N8N0 203 aa12.66□□□□□ -0.38
COL7A1-203ENST00000459756 KLHL30-AS1Q8NEE0 82 aa12.66□□□□□ -0.38
COL7A1-203ENST00000459756 OR5AN1Q8NGI8 311 aa12.66□□□□□ -0.38
COL7A1-203ENST00000459756 TOLLIPQ9H0E2 274 aa12.66□□□□□ -0.38
COL7A1-203ENST00000459756 RDH8Q9NYR8 311 aa12.66□□□□□ -0.38
COL7A1-203ENST00000459756 WASHC3Q9Y3C0 194 aa12.66□□□□□ -0.38
COL7A1-203ENST00000459756 H0YJW9 148 aa12.65□□□□□ -0.38
COL7A1-203ENST00000459756 RBBP9O75884 186 aa12.65□□□□□ -0.38
COL7A1-203ENST00000459756 NDUFA3O95167 84 aa12.65□□□□□ -0.38
COL7A1-203ENST00000459756 DUS4LO95620 317 aaKnown RBP12.65□□□□□ -0.38
COL7A1-203ENST00000459756 IGHG4P01861 327 aa12.65□□□□□ -0.38
COL7A1-203ENST00000459756 TFAP2AP05549 437 aa12.65□□□□□ -0.38
COL7A1-203ENST00000459756 IGLL1P15814 213 aa12.65□□□□□ -0.38
COL7A1-203ENST00000459756 TALDO1P37837 337 aa12.65□□□□□ -0.38
COL7A1-203ENST00000459756 THBS3P49746 956 aa12.65□□□□□ -0.38
COL7A1-203ENST00000459756 NCS1P62166 190 aa12.65□□□□□ -0.38
COL7A1-203ENST00000459756 CFHR3Q02985 330 aa12.65□□□□□ -0.38
COL7A1-203ENST00000459756 ARFRP1Q13795 201 aa12.65□□□□□ -0.38
COL7A1-203ENST00000459756 SRSF7Q16629 238 aaKnown RBP eCLIP12.65□□□□□ -0.38
COL7A1-203ENST00000459756 IDNKQ5T6J7 187 aa12.65□□□□□ -0.38
COL7A1-203ENST00000459756 LIN54Q6MZP7 749 aa12.65□□□□□ -0.38
COL7A1-203ENST00000459756 SFXN4Q6P4A7 337 aa12.65□□□□□ -0.38
COL7A1-203ENST00000459756 ETV3LQ6ZN32 361 aa12.65□□□□□ -0.38
COL7A1-203ENST00000459756 LINC00482Q8N8I6 264 aa12.65□□□□□ -0.38
COL7A1-203ENST00000459756 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.65□□□□□ -0.38
COL7A1-203ENST00000459756 OR10J5Q8NHC4 309 aa12.65□□□□□ -0.38
COL7A1-203ENST00000459756 RCC1LQ96I51 464 aaKnown RBP12.65□□□□□ -0.38
COL7A1-203ENST00000459756 RNF5Q99942 180 aa12.65□□□□□ -0.38
COL7A1-203ENST00000459756 CABLES2Q9BTV7 478 aa12.65□□□□□ -0.38
COL7A1-203ENST00000459756 OR51J1Q9H342 316 aa12.65□□□□□ -0.38
COL7A1-203ENST00000459756 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.65□□□□□ -0.38
COL7A1-203ENST00000459756 NECAP2Q9NVZ3 263 aa12.65□□□□□ -0.38
COL7A1-203ENST00000459756 RNF150Q9ULK6 438 aa12.65□□□□□ -0.38
COL7A1-203ENST00000459756 H7C2Y5 167 aa12.64□□□□□ -0.39
COL7A1-203ENST00000459756 BET1O15155 118 aa12.64□□□□□ -0.39
COL7A1-203ENST00000459756 SCGNO76038 276 aa12.64□□□□□ -0.39
COL7A1-203ENST00000459756 RPLP1P05386 114 aaKnown RBP12.64□□□□□ -0.39
COL7A1-203ENST00000459756 GSTT2P0CG29 244 aa12.64□□□□□ -0.39
COL7A1-203ENST00000459756 GSTT2BP0CG30 244 aa12.64□□□□□ -0.39
COL7A1-203ENST00000459756 SNRPBP14678 240 aaKnown RBP12.64□□□□□ -0.39
COL7A1-203ENST00000459756 ALDH3B2P48448 385 aa12.64□□□□□ -0.39
COL7A1-203ENST00000459756 GLDNQ6ZMI3 551 aaPredicted RBP12.64□□□□□ -0.39
COL7A1-203ENST00000459756 Q6ZS49 121 aa12.64□□□□□ -0.39
COL7A1-203ENST00000459756 C18orf65Q6ZTR6 163 aa12.64□□□□□ -0.39
COL7A1-203ENST00000459756 C8orf86Q6ZUL3 223 aa12.64□□□□□ -0.39
COL7A1-203ENST00000459756 MRPL41Q8IXM3 137 aaKnown RBP12.64□□□□□ -0.39
COL7A1-203ENST00000459756 SCOCQ9UIL1 159 aa12.64□□□□□ -0.39
COL7A1-203ENST00000459756 TRBV6-7A0A0A0MS04 114 aa12.63□□□□□ -0.39
COL7A1-203ENST00000459756 IGHV7-81A0A0B4J1V7 117 aa12.63□□□□□ -0.39
COL7A1-203ENST00000459756 RRHO14718 337 aa12.63□□□□□ -0.39
COL7A1-203ENST00000459756 PROP1O75360 226 aa12.63□□□□□ -0.39
COL7A1-203ENST00000459756 GSTP1P09211 210 aaKnown RBP12.63□□□□□ -0.39
COL7A1-203ENST00000459756 MYCNOSP40205 109 aa12.63□□□□□ -0.39
COL7A1-203ENST00000459756 CDX1P47902 265 aaPredicted RBP12.63□□□□□ -0.39
COL7A1-203ENST00000459756 IGSF11Q5DX21 431 aa12.63□□□□□ -0.39
COL7A1-203ENST00000459756 CLVS1Q8IUQ0 354 aaPredicted RBP12.63□□□□□ -0.39
COL7A1-203ENST00000459756 DRAXINQ8NBI3 349 aaPredicted RBP12.63□□□□□ -0.39
COL7A1-203ENST00000459756 LGALS14Q8TCE9 139 aa12.63□□□□□ -0.39
COL7A1-203ENST00000459756 MAFIPQ8WZ33 124 aa12.63□□□□□ -0.39
COL7A1-203ENST00000459756 ZNF230Q9UIE0 474 aaPredicted RBP12.63□□□□□ -0.39
COL7A1-203ENST00000459756 ATP6V0E1O15342 81 aa12.62□□□□□ -0.39
COL7A1-203ENST00000459756 PRB2P02812 416 aaPredicted RBP12.62□□□□□ -0.39
COL7A1-203ENST00000459756 DTYMKP23919 212 aa12.62□□□□□ -0.39
COL7A1-203ENST00000459756 PSMB8P28062 276 aa12.62□□□□□ -0.39
COL7A1-203ENST00000459756 RPS19P39019 145 aaKnown RBP12.62□□□□□ -0.39
COL7A1-203ENST00000459756 SCAND1P57086 179 aa12.62□□□□□ -0.39
COL7A1-203ENST00000459756 PLGLAQ15195 96 aa12.62□□□□□ -0.39
COL7A1-203ENST00000459756 CDNFQ49AH0 187 aa12.62□□□□□ -0.39
COL7A1-203ENST00000459756 HACD4Q5VWC8 232 aa12.62□□□□□ -0.39
COL7A1-203ENST00000459756 FOXB2Q5VYV0 432 aa12.62□□□□□ -0.39
COL7A1-203ENST00000459756 ZNF660Q6AZW8 331 aaPredicted RBP12.62□□□□□ -0.39
COL7A1-203ENST00000459756 ZNF383Q8NA42 475 aa12.62□□□□□ -0.39
COL7A1-203ENST00000459756 P2RX4Q99571 388 aa12.62□□□□□ -0.39
COL7A1-203ENST00000459756 GPR61Q9BZJ8 451 aa12.62□□□□□ -0.39
COL7A1-203ENST00000459756 FBXL15Q9H469 300 aa12.62□□□□□ -0.39
COL7A1-203ENST00000459756 PARP11Q9NR21 331 aa12.62□□□□□ -0.39
COL7A1-203ENST00000459756 GAB2Q9UQC2 676 aa12.62□□□□□ -0.39
COL7A1-203ENST00000459756 DNAH3Q8TD57 4116 aa12.62□□□□□ -0.39
COL7A1-203ENST00000459756 TRAV41A0A0B4J266 112 aa12.61□□□□□ -0.39
COL7A1-203ENST00000459756 M0R1X1 148 aa12.61□□□□□ -0.39
COL7A1-203ENST00000459756 GABARAPO95166 117 aa12.61□□□□□ -0.39
COL7A1-203ENST00000459756 APOA2P02652 100 aa12.61□□□□□ -0.39
COL7A1-203ENST00000459756 OR8U9P0C7N5 309 aa12.61□□□□□ -0.39
COL7A1-203ENST00000459756 PPIFP30405 207 aaKnown RBP12.61□□□□□ -0.39
COL7A1-203ENST00000459756 RPL5P46777 297 aaKnown RBP12.61□□□□□ -0.39
COL7A1-203ENST00000459756 LCNL1Q6ZST4 164 aa12.61□□□□□ -0.39
COL7A1-203ENST00000459756 ANKRD13BQ86YJ7 626 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms