RNA–Protein interactions for RNA: ENST00000457753.5

UBA1-208, Transcript of ubiquitin like modifier activating enzyme 1, human

TSL 5

Gene UBA1, Length 809 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA1-208	ENST00000457753	P2RX4	Q99571	388 aa		13.44	□□□□□ -0.26
UBA1-208	ENST00000457753	ABHD14A	Q9BUJ0	271 aa		13.44	□□□□□ -0.26
UBA1-208	ENST00000457753	RBM38	Q9H0Z9	239 aa	Known RBP	13.44	□□□□□ -0.26
UBA1-208	ENST00000457753	ABCG5	Q9H222	651 aa		13.44	□□□□□ -0.26
UBA1-208	ENST00000457753		A0A075B6Q4	140 aa		13.43	□□□□□ -0.26
UBA1-208	ENST00000457753		A0A0A6YYH2	397 aa		13.43	□□□□□ -0.26
UBA1-208	ENST00000457753		A6NJ64	397 aa		13.43	□□□□□ -0.26
UBA1-208	ENST00000457753	CCL24	O00175	119 aa		13.43	□□□□□ -0.26
UBA1-208	ENST00000457753	LANCL1	O43813	399 aa		13.43	□□□□□ -0.26
UBA1-208	ENST00000457753	MOS	P00540	346 aa		13.43	□□□□□ -0.26
UBA1-208	ENST00000457753	IGHG2	P01859	326 aa		13.43	□□□□□ -0.26
UBA1-208	ENST00000457753	PPP1CC	P36873	323 aa	Known RBP	13.43	□□□□□ -0.26
UBA1-208	ENST00000457753	TEX38	Q6PEX7	206 aa		13.43	□□□□□ -0.26
UBA1-208	ENST00000457753	LCNL1	Q6ZST4	164 aa		13.43	□□□□□ -0.26
UBA1-208	ENST00000457753	COMMD1	Q8N668	190 aa		13.43	□□□□□ -0.26
UBA1-208	ENST00000457753	SAMD12	Q8N8I0	201 aa		13.43	□□□□□ -0.26
UBA1-208	ENST00000457753	OR52L2P	Q8NGH6	319 aa		13.43	□□□□□ -0.26
UBA1-208	ENST00000457753	DYNC2LI1	Q8TCX1	351 aa		13.43	□□□□□ -0.26
UBA1-208	ENST00000457753	AP3S1	Q92572	193 aa		13.43	□□□□□ -0.26
UBA1-208	ENST00000457753	CMTM3	Q96MX0	182 aa		13.43	□□□□□ -0.26
UBA1-208	ENST00000457753	PRR25	Q96S07	402 aa		13.43	□□□□□ -0.26
UBA1-208	ENST00000457753	CMSS1	Q9BQ75	279 aa	Known RBP	13.43	□□□□□ -0.26
UBA1-208	ENST00000457753	HDHD3	Q9BSH5	251 aa	Predicted RBP	13.43	□□□□□ -0.26
UBA1-208	ENST00000457753	CHMP1A	Q9HD42	196 aa	Predicted RBP	13.43	□□□□□ -0.26
UBA1-208	ENST00000457753	C12orf4	Q9NQ89	552 aa		13.43	□□□□□ -0.26
UBA1-208	ENST00000457753	LIN7C	Q9NUP9	197 aa	Known RBP	13.43	□□□□□ -0.26
UBA1-208	ENST00000457753	COMMD3	Q9UBI1	195 aa		13.43	□□□□□ -0.26
UBA1-208	ENST00000457753		U3KQK5	164 aa		13.43	□□□□□ -0.26
UBA1-208	ENST00000457753	CCDC160	A6NGH7	325 aa		13.42	□□□□□ -0.26
UBA1-208	ENST00000457753	RPLP1	P05386	114 aa	Known RBP	13.42	□□□□□ -0.26
UBA1-208	ENST00000457753	CD3G	P09693	182 aa		13.42	□□□□□ -0.26
UBA1-208	ENST00000457753	SOX6	P35712	828 aa		13.42	□□□□□ -0.26
UBA1-208	ENST00000457753	ZNF260	Q3ZCT1	412 aa		13.42	□□□□□ -0.26
UBA1-208	ENST00000457753	CDNF	Q49AH0	187 aa		13.42	□□□□□ -0.26
UBA1-208	ENST00000457753	S100A16	Q96FQ6	103 aa	Known RBP	13.42	□□□□□ -0.26
UBA1-208	ENST00000457753	ASCL2	Q99929	193 aa		13.42	□□□□□ -0.26
UBA1-208	ENST00000457753	DIABLO	Q9NR28	239 aa		13.42	□□□□□ -0.26
UBA1-208	ENST00000457753	AP4M1	O00189	453 aa		13.41	□□□□□ -0.26
UBA1-208	ENST00000457753	RAMP3	O60896	148 aa		13.41	□□□□□ -0.26
UBA1-208	ENST00000457753	GSTP1	P09211	210 aa	Known RBP	13.41	□□□□□ -0.26
UBA1-208	ENST00000457753	NHLRC4	P0CG21	123 aa	Predicted RBP	13.41	□□□□□ -0.26
UBA1-208	ENST00000457753	ECI1	P42126	302 aa		13.41	□□□□□ -0.26
UBA1-208	ENST00000457753	MRPS15	P82914	257 aa	Known RBP	13.41	□□□□□ -0.26
UBA1-208	ENST00000457753	LSAMP	Q13449	338 aa		13.41	□□□□□ -0.26
UBA1-208	ENST00000457753	ARFRP1	Q13795	201 aa		13.41	□□□□□ -0.26
UBA1-208	ENST00000457753	PNLIPRP3	Q17RR3	467 aa		13.41	□□□□□ -0.26
UBA1-208	ENST00000457753	CXorf66	Q5JRM2	361 aa	Predicted RBP	13.41	□□□□□ -0.26
UBA1-208	ENST00000457753	MZT2A	Q6P582	158 aa		13.41	□□□□□ -0.26
UBA1-208	ENST00000457753	C5orf24	Q7Z6I8	188 aa		13.41	□□□□□ -0.26
UBA1-208	ENST00000457753	ODF3L1	Q8IXM7	274 aa		13.41	□□□□□ -0.26
UBA1-208	ENST00000457753	OR2AK2	Q8NG84	335 aa		13.41	□□□□□ -0.26
UBA1-208	ENST00000457753	OR5M8	Q8NGP6	311 aa		13.41	□□□□□ -0.26
UBA1-208	ENST00000457753	SETD6	Q8TBK2	473 aa		13.41	□□□□□ -0.26
UBA1-208	ENST00000457753	PLSCR3	Q9NRY6	295 aa		13.41	□□□□□ -0.26
UBA1-208	ENST00000457753	RSL24D1	Q9UHA3	163 aa	Known RBP	13.41	□□□□□ -0.26
UBA1-208	ENST00000457753	MGAT4A	Q9UM21	535 aa		13.41	□□□□□ -0.26
UBA1-208	ENST00000457753	TRAV18	A0A075B6X5	111 aa		13.4	□□□□□ -0.26
UBA1-208	ENST00000457753	ZNF736	B4DX44	427 aa	Predicted RBP	13.4	□□□□□ -0.26
UBA1-208	ENST00000457753	ZNF701	M0R085	212 aa	Predicted RBP	13.4	□□□□□ -0.26
UBA1-208	ENST00000457753	APOA1	P02647	267 aa		13.4	□□□□□ -0.26
UBA1-208	ENST00000457753	GPR12	P47775	334 aa		13.4	□□□□□ -0.26
UBA1-208	ENST00000457753	HACD4	Q5VWC8	232 aa		13.4	□□□□□ -0.26
UBA1-208	ENST00000457753	FAM71F2	Q6NXP2	309 aa		13.4	□□□□□ -0.26
UBA1-208	ENST00000457753	ZNF833P	Q6ZTB9	187 aa		13.4	□□□□□ -0.26
UBA1-208	ENST00000457753		Q8N9W7	124 aa		13.4	□□□□□ -0.26
UBA1-208	ENST00000457753	IL1F10	Q8WWZ1	152 aa		13.4	□□□□□ -0.26
UBA1-208	ENST00000457753	S1PR3	Q99500	378 aa		13.4	□□□□□ -0.26
UBA1-208	ENST00000457753	GON7	Q9BXV9	100 aa		13.4	□□□□□ -0.26
UBA1-208	ENST00000457753		Q9N2K0	584 aa		13.4	□□□□□ -0.26
UBA1-208	ENST00000457753	CCDC59	Q9P031	241 aa	Known RBP	13.4	□□□□□ -0.26
UBA1-208	ENST00000457753	ELF5	Q9UKW6	265 aa	Predicted RBP	13.4	□□□□□ -0.26
UBA1-208	ENST00000457753	SMIM31	A0A1B0GVY4	71 aa		13.39	□□□□□ -0.27
UBA1-208	ENST00000457753	TMEM235	A6NFC5	223 aa		13.39	□□□□□ -0.27
UBA1-208	ENST00000457753	SEC14L6	B5MCN3	397 aa		13.39	□□□□□ -0.27
UBA1-208	ENST00000457753	XRCC3	O43542	346 aa		13.39	□□□□□ -0.27
UBA1-208	ENST00000457753	HPGDS	O60760	199 aa		13.39	□□□□□ -0.27
UBA1-208	ENST00000457753	EIF4E	P06730	217 aa	Known RBP	13.39	□□□□□ -0.27
UBA1-208	ENST00000457753	HLA-DRB3	P79483	266 aa		13.39	□□□□□ -0.27
UBA1-208	ENST00000457753	C9orf66	Q5T8R8	295 aa		13.39	□□□□□ -0.27
UBA1-208	ENST00000457753	FAM71E2	Q8N5Q1	922 aa		13.39	□□□□□ -0.27
UBA1-208	ENST00000457753	OR8U1	Q8NH10	309 aa		13.39	□□□□□ -0.27
UBA1-208	ENST00000457753	RASL11B	Q9BPW5	248 aa		13.39	□□□□□ -0.27
UBA1-208	ENST00000457753	PIPOX	Q9P0Z9	390 aa		13.39	□□□□□ -0.27
UBA1-208	ENST00000457753	SAA2-SAA4	A0A096LPE2	208 aa		13.38	□□□□□ -0.27
UBA1-208	ENST00000457753	ITGB1BP1	O14713	200 aa		13.38	□□□□□ -0.27
UBA1-208	ENST00000457753	LY86	O95711	162 aa		13.38	□□□□□ -0.27
UBA1-208	ENST00000457753	FCGR3A	P08637	254 aa		13.38	□□□□□ -0.27
UBA1-208	ENST00000457753	SAA2	P0DJI9	122 aa	Predicted RBP	13.38	□□□□□ -0.27
UBA1-208	ENST00000457753	TALDO1	P37837	337 aa		13.38	□□□□□ -0.27
UBA1-208	ENST00000457753	PITPNA	Q00169	270 aa		13.38	□□□□□ -0.27
UBA1-208	ENST00000457753	RBMXL1	Q96E39	390 aa	Known RBP	13.38	□□□□□ -0.27
UBA1-208	ENST00000457753	NABP2	Q9BQ15	211 aa		13.38	□□□□□ -0.27
UBA1-208	ENST00000457753	MRPL20	Q9BYC9	149 aa	Known RBP	13.38	□□□□□ -0.27
UBA1-208	ENST00000457753	IFI27L2	Q9H2X8	130 aa		13.38	□□□□□ -0.27
UBA1-208	ENST00000457753	AUNIP	Q9H7T9	357 aa		13.38	□□□□□ -0.27
UBA1-208	ENST00000457753	DPPA5	A6NC42	116 aa		13.37	□□□□□ -0.27
UBA1-208	ENST00000457753	ELK1	P19419	428 aa		13.37	□□□□□ -0.27
UBA1-208	ENST00000457753	DTYMK	P23919	212 aa		13.37	□□□□□ -0.27
UBA1-208	ENST00000457753	GNG2	P59768	71 aa		13.37	□□□□□ -0.27
UBA1-208	ENST00000457753	SRSF7	Q16629	238 aa	Known RBP eCLIP	13.37	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms