RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 SNRPBP14678 240 aaKnown RBP12.74□□□□□ -0.37
CPSF6-203ENST00000456847 CD36P16671 472 aa12.74□□□□□ -0.37
CPSF6-203ENST00000456847 SDC2P34741 201 aa12.74□□□□□ -0.37
CPSF6-203ENST00000456847 IGSF11Q5DX21 431 aa12.74□□□□□ -0.37
CPSF6-203ENST00000456847 LGALS14Q8TCE9 139 aa12.74□□□□□ -0.37
CPSF6-203ENST00000456847 GINS4Q9BRT9 223 aa12.74□□□□□ -0.37
CPSF6-203ENST00000456847 CABLES2Q9BTV7 478 aa12.74□□□□□ -0.37
CPSF6-203ENST00000456847 APOA2P02652 100 aa12.74□□□□□ -0.37
CPSF6-203ENST00000456847 SLC6A1P30531 599 aa12.74□□□□□ -0.37
CPSF6-203ENST00000456847 FOXE3Q13461 319 aa12.74□□□□□ -0.37
CPSF6-203ENST00000456847 LIN54Q6MZP7 749 aa12.74□□□□□ -0.37
CPSF6-203ENST00000456847 LCNL1Q6ZST4 164 aa12.74□□□□□ -0.37
CPSF6-203ENST00000456847 ZNF695Q8IW36 515 aa12.74□□□□□ -0.37
CPSF6-203ENST00000456847 DRAXINQ8NBI3 349 aaPredicted RBP12.74□□□□□ -0.37
CPSF6-203ENST00000456847 WFDC9Q8NEX5 89 aa12.74□□□□□ -0.37
CPSF6-203ENST00000456847 NPBQ8NG41 125 aa12.74□□□□□ -0.37
CPSF6-203ENST00000456847 OR51J1Q9H342 316 aa12.74□□□□□ -0.37
CPSF6-203ENST00000456847 RNF167Q9H6Y7 350 aa12.74□□□□□ -0.37
CPSF6-203ENST00000456847 RBM7Q9Y580 266 aaKnown RBP12.74□□□□□ -0.37
CPSF6-203ENST00000456847 M0R1X1 148 aa12.73□□□□□ -0.37
CPSF6-203ENST00000456847 ATP6V0E1O15342 81 aa12.73□□□□□ -0.37
CPSF6-203ENST00000456847 RBBP9O75884 186 aa12.73□□□□□ -0.37
CPSF6-203ENST00000456847 NDUFA3O95167 84 aa12.73□□□□□ -0.37
CPSF6-203ENST00000456847 IGF1P05019 195 aa12.73□□□□□ -0.37
CPSF6-203ENST00000456847 TFAP2AP05549 437 aa12.73□□□□□ -0.37
CPSF6-203ENST00000456847 ELANEP08246 267 aa12.73□□□□□ -0.37
CPSF6-203ENST00000456847 ETV3LQ6ZN32 361 aa12.73□□□□□ -0.37
CPSF6-203ENST00000456847 RCC1LQ96I51 464 aaKnown RBP12.73□□□□□ -0.37
CPSF6-203ENST00000456847 OR2D2Q9H210 308 aa12.73□□□□□ -0.37
CPSF6-203ENST00000456847 FBXL15Q9H469 300 aa12.73□□□□□ -0.37
CPSF6-203ENST00000456847 VCX3AQ9NNX9 186 aa12.73□□□□□ -0.37
CPSF6-203ENST00000456847 WSB1Q9Y6I7 421 aa12.73□□□□□ -0.37
CPSF6-203ENST00000456847 RRHO14718 337 aa12.72□□□□□ -0.37
CPSF6-203ENST00000456847 SCGNO76038 276 aa12.72□□□□□ -0.37
CPSF6-203ENST00000456847 CLEC2LP0C7M8 214 aa12.72□□□□□ -0.37
CPSF6-203ENST00000456847 THBS3P49746 956 aa12.72□□□□□ -0.37
CPSF6-203ENST00000456847 CDNFQ49AH0 187 aa12.72□□□□□ -0.37
CPSF6-203ENST00000456847 REC114Q7Z4M0 266 aa12.72□□□□□ -0.37
CPSF6-203ENST00000456847 LINC00482Q8N8I6 264 aa12.72□□□□□ -0.37
CPSF6-203ENST00000456847 OR5AN1Q8NGI8 311 aa12.72□□□□□ -0.37
CPSF6-203ENST00000456847 ABHD5Q8WTS1 349 aa12.72□□□□□ -0.37
CPSF6-203ENST00000456847 NECAP2Q9NVZ3 263 aa12.72□□□□□ -0.37
CPSF6-203ENST00000456847 ZNF580Q9UK33 172 aa12.72□□□□□ -0.37
CPSF6-203ENST00000456847 ELF5Q9UKW6 265 aaPredicted RBP12.72□□□□□ -0.37
CPSF6-203ENST00000456847 TRBV6-7A0A0A0MS04 114 aa12.72□□□□□ -0.37
CPSF6-203ENST00000456847 IGHV7-81A0A0B4J1V7 117 aa12.72□□□□□ -0.37
CPSF6-203ENST00000456847 IGHG4P01861 327 aa12.72□□□□□ -0.37
CPSF6-203ENST00000456847 OR8U9P0C7N5 309 aa12.72□□□□□ -0.37
CPSF6-203ENST00000456847 MYCNOSP40205 109 aa12.72□□□□□ -0.37
CPSF6-203ENST00000456847 RAB25P57735 213 aa12.72□□□□□ -0.37
CPSF6-203ENST00000456847 CFHR3Q02985 330 aa12.72□□□□□ -0.37
CPSF6-203ENST00000456847 IDNKQ5T6J7 187 aa12.72□□□□□ -0.37
CPSF6-203ENST00000456847 FOXB2Q5VYV0 432 aa12.72□□□□□ -0.37
CPSF6-203ENST00000456847 MRPL41Q8IXM3 137 aaKnown RBP12.72□□□□□ -0.37
CPSF6-203ENST00000456847 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.72□□□□□ -0.37
CPSF6-203ENST00000456847 OR8U1Q8NH10 309 aa12.72□□□□□ -0.37
CPSF6-203ENST00000456847 TRAV41A0A0B4J266 112 aa12.71□□□□□ -0.37
CPSF6-203ENST00000456847 DUS4LO95620 317 aaKnown RBP12.71□□□□□ -0.37
CPSF6-203ENST00000456847 DIRAS3O95661 229 aa12.71□□□□□ -0.37
CPSF6-203ENST00000456847 DTYMKP23919 212 aa12.71□□□□□ -0.37
CPSF6-203ENST00000456847 GNG2P59768 71 aa12.71□□□□□ -0.37
CPSF6-203ENST00000456847 ECSCRQ19T08 205 aa12.71□□□□□ -0.37
CPSF6-203ENST00000456847 TMEM65Q6PI78 240 aa12.71□□□□□ -0.37
CPSF6-203ENST00000456847 PDPNQ86YL7 162 aa12.71□□□□□ -0.37
CPSF6-203ENST00000456847 DUX3Q96PT4 197 aa12.71□□□□□ -0.37
CPSF6-203ENST00000456847 CENPOQ9BU64 300 aa12.71□□□□□ -0.37
CPSF6-203ENST00000456847 TOLLIPQ9H0E2 274 aa12.71□□□□□ -0.37
CPSF6-203ENST00000456847 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.71□□□□□ -0.37
CPSF6-203ENST00000456847 SLC35D1Q9NTN3 355 aa12.71□□□□□ -0.37
CPSF6-203ENST00000456847 RHBDL2Q9NX52 303 aa12.71□□□□□ -0.37
CPSF6-203ENST00000456847 G3V318 75 aa12.7□□□□□ -0.38
CPSF6-203ENST00000456847 RPS16P62249 146 aaKnown RBP12.7□□□□□ -0.38
CPSF6-203ENST00000456847 TIMM50Q3ZCQ8 353 aa12.7□□□□□ -0.38
CPSF6-203ENST00000456847 ZNF383Q8NA42 475 aa12.7□□□□□ -0.38
CPSF6-203ENST00000456847 NUDCD2Q8WVJ2 157 aa12.7□□□□□ -0.38
CPSF6-203ENST00000456847 CLCC1Q96S66 551 aa12.7□□□□□ -0.38
CPSF6-203ENST00000456847 TSNAXQ99598 290 aaKnown RBP12.7□□□□□ -0.38
CPSF6-203ENST00000456847 ST6GALNAC5Q9BVH7 336 aa12.7□□□□□ -0.38
CPSF6-203ENST00000456847 METTL1Q9UBP6 276 aaKnown RBP12.7□□□□□ -0.38
CPSF6-203ENST00000456847 TMEM235A6NFC5 223 aa12.7□□□□□ -0.38
CPSF6-203ENST00000456847 TNFAIP8O95379 198 aa12.7□□□□□ -0.38
CPSF6-203ENST00000456847 LINC00205P59089 165 aa12.7□□□□□ -0.38
CPSF6-203ENST00000456847 CBX3Q13185 183 aa12.7□□□□□ -0.38
CPSF6-203ENST00000456847 SRSF7Q16629 238 aaKnown RBP eCLIP12.7□□□□□ -0.388e-10■■■■□ 21.9
CPSF6-203ENST00000456847 DEFB136Q30KP8 78 aa12.7□□□□□ -0.38
CPSF6-203ENST00000456847 HACD4Q5VWC8 232 aa12.7□□□□□ -0.38
CPSF6-203ENST00000456847 RNF152Q8N8N0 203 aa12.7□□□□□ -0.38
CPSF6-203ENST00000456847 DPF1Q92782 380 aa12.7□□□□□ -0.38
CPSF6-203ENST00000456847 RNF5Q99942 180 aa12.7□□□□□ -0.38
CPSF6-203ENST00000456847 GPR61Q9BZJ8 451 aa12.7□□□□□ -0.38
CPSF6-203ENST00000456847 AURKAIP1Q9NWT8 199 aaPredicted RBP12.7□□□□□ -0.38
CPSF6-203ENST00000456847 SDHAF2Q9NX18 166 aa12.7□□□□□ -0.38
CPSF6-203ENST00000456847 ETV7Q9Y603 341 aa12.7□□□□□ -0.38
CPSF6-203ENST00000456847 A3GALT2U3KPV4 340 aa12.7□□□□□ -0.38
CPSF6-203ENST00000456847 A0A087WXM4 84 aa12.69□□□□□ -0.38
CPSF6-203ENST00000456847 CCL24O00175 119 aa12.69□□□□□ -0.38
CPSF6-203ENST00000456847 PROP1O75360 226 aa12.69□□□□□ -0.38
CPSF6-203ENST00000456847 PSMB8P28062 276 aa12.69□□□□□ -0.38
CPSF6-203ENST00000456847 CDX1P47902 265 aaPredicted RBP12.69□□□□□ -0.38
CPSF6-203ENST00000456847 PITPNAQ00169 270 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms