RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 FAM90A20PA6NIJ5 464 aa8.71□□□□□ -1.01
CLIP4-208ENST00000456385 FAM90A8PA6NJQ4 464 aa8.71□□□□□ -1.01
CLIP4-208ENST00000456385 FAM90A7PA6NKC0 464 aa8.71□□□□□ -1.01
CLIP4-208ENST00000456385 FAM90A22PA8MWA6 464 aa8.71□□□□□ -1.01
CLIP4-208ENST00000456385 FAM90A12PA8MX19 464 aa8.71□□□□□ -1.01
CLIP4-208ENST00000456385 FAM90A5PA8MXJ8 464 aa8.71□□□□□ -1.01
CLIP4-208ENST00000456385 FAM90A23PA8MXZ1 464 aa8.71□□□□□ -1.01
CLIP4-208ENST00000456385 IGLV3-19P01714 112 aa8.71□□□□□ -1.01
CLIP4-208ENST00000456385 IGHV3-9P01782 118 aa8.71□□□□□ -1.01
CLIP4-208ENST00000456385 FAM90A15PP0C7V4 464 aa8.71□□□□□ -1.01
CLIP4-208ENST00000456385 FAM90A13PP0C7W8 464 aa8.71□□□□□ -1.01
CLIP4-208ENST00000456385 FAM90A14PP0C7W9 464 aa8.71□□□□□ -1.01
CLIP4-208ENST00000456385 FAM90A24PP0C7X0 464 aa8.71□□□□□ -1.01
CLIP4-208ENST00000456385 FKBP2P26885 142 aaKnown RBP8.71□□□□□ -1.01
CLIP4-208ENST00000456385 HYAL1Q12794 435 aa8.71□□□□□ -1.01
CLIP4-208ENST00000456385 FOXL1Q12952 345 aa8.71□□□□□ -1.01
CLIP4-208ENST00000456385 CEACAM16Q2WEN9 425 aa8.71□□□□□ -1.01
CLIP4-208ENST00000456385 MRPL52Q86TS9 123 aaKnown RBP8.71□□□□□ -1.01
CLIP4-208ENST00000456385 FGFRL1Q8N441 504 aa8.71□□□□□ -1.01
CLIP4-208ENST00000456385 SFRP2Q96HF1 295 aa8.71□□□□□ -1.01
CLIP4-208ENST00000456385 KCNS2Q9ULS6 477 aa8.71□□□□□ -1.01
CLIP4-208ENST00000456385 ZFP30Q9Y2G7 519 aa8.71□□□□□ -1.01
CLIP4-208ENST00000456385 TIMM9Q9Y5J7 89 aa8.71□□□□□ -1.01
CLIP4-208ENST00000456385 NBEAQ8NFP9 2946 aa8.71□□□□□ -1.02
CLIP4-208ENST00000456385 ESPL1Q14674 2120 aa8.71□□□□□ -1.02
CLIP4-208ENST00000456385 CCL3P10147 92 aa8.71□□□□□ -1.02
CLIP4-208ENST00000456385 CHRNB4P30926 498 aa8.71□□□□□ -1.02
CLIP4-208ENST00000456385 THBS3P49746 956 aa8.71□□□□□ -1.02
CLIP4-208ENST00000456385 LHX2P50458 406 aa8.71□□□□□ -1.02
CLIP4-208ENST00000456385 TPPP2P59282 170 aa8.71□□□□□ -1.02
CLIP4-208ENST00000456385 IGFBP7Q16270 282 aa8.71□□□□□ -1.02
CLIP4-208ENST00000456385 FBXW9Q5XUX1 488 aa8.71□□□□□ -1.02
CLIP4-208ENST00000456385 HLA-CQ95604 372 aa8.71□□□□□ -1.02
CLIP4-208ENST00000456385 OR6C1Q96RD1 312 aa8.71□□□□□ -1.02
CLIP4-208ENST00000456385 FOXB1Q99853 325 aa8.71□□□□□ -1.02
CLIP4-208ENST00000456385 FAM103A1Q9BTL3 118 aaKnown RBP8.71□□□□□ -1.02
CLIP4-208ENST00000456385 ZNF391Q9UJN7 358 aa8.71□□□□□ -1.02
CLIP4-208ENST00000456385 RBM7Q9Y580 266 aaKnown RBP8.71□□□□□ -1.02
CLIP4-208ENST00000456385 TRAV38-1A0A0B4J264 116 aa8.7□□□□□ -1.02
CLIP4-208ENST00000456385 TRAV24A0A0B4J272 114 aa8.7□□□□□ -1.02
CLIP4-208ENST00000456385 RAMP3O60896 148 aa8.7□□□□□ -1.02
CLIP4-208ENST00000456385 SPINK9Q5DT21 86 aa8.7□□□□□ -1.02
CLIP4-208ENST00000456385 COL5A1-AS1Q5SY13 56 aa8.7□□□□□ -1.02
CLIP4-208ENST00000456385 STPG4Q8N801 248 aa8.7□□□□□ -1.02
CLIP4-208ENST00000456385 RNASE8Q8TDE3 154 aaKnown RBP8.7□□□□□ -1.02
CLIP4-208ENST00000456385 PSMF1Q92530 271 aa8.7□□□□□ -1.02
CLIP4-208ENST00000456385 CIB3Q96Q77 187 aaPredicted RBP8.7□□□□□ -1.02
CLIP4-208ENST00000456385 NPCDR1Q9BY65 106 aa8.7□□□□□ -1.02
CLIP4-208ENST00000456385 TRAPPC2LH3BP13 241 aa8.7□□□□□ -1.02
CLIP4-208ENST00000456385 KRASP01116 189 aa8.7□□□□□ -1.02
CLIP4-208ENST00000456385 COX5AP20674 150 aa8.7□□□□□ -1.02
CLIP4-208ENST00000456385 YPEL3P61236 119 aaPredicted RBP8.7□□□□□ -1.02
CLIP4-208ENST00000456385 MSMO1Q15800 293 aa8.7□□□□□ -1.02
CLIP4-208ENST00000456385 OR5AU1Q8NGC0 362 aa8.7□□□□□ -1.02
CLIP4-208ENST00000456385 ZDHHC16Q969W1 377 aa8.7□□□□□ -1.02
CLIP4-208ENST00000456385 STRADBQ9C0K7 418 aa8.7□□□□□ -1.02
CLIP4-208ENST00000456385 PROK2Q9HC23 129 aa8.7□□□□□ -1.02
CLIP4-208ENST00000456385 CLEC1BQ9P126 229 aa8.7□□□□□ -1.02
CLIP4-208ENST00000456385 IGHV1OR15-9A0A0B4J2B8 117 aa8.69□□□□□ -1.02
CLIP4-208ENST00000456385 PMS2P5A8MQ11 134 aa8.69□□□□□ -1.02
CLIP4-208ENST00000456385 TMPRSS2O15393 492 aa8.69□□□□□ -1.02
CLIP4-208ENST00000456385 SCRG1O75711 98 aa8.69□□□□□ -1.02
CLIP4-208ENST00000456385 NDUFB8O95169 186 aa8.69□□□□□ -1.02
CLIP4-208ENST00000456385 CD99P14209 185 aa8.69□□□□□ -1.02
CLIP4-208ENST00000456385 LIFP15018 202 aa8.69□□□□□ -1.02
CLIP4-208ENST00000456385 CRISP2P16562 243 aa8.69□□□□□ -1.02
CLIP4-208ENST00000456385 PAFAH1B2P68402 229 aa8.69□□□□□ -1.02
CLIP4-208ENST00000456385 WDR74Q6RFH5 385 aaPredicted RBP8.69□□□□□ -1.02
CLIP4-208ENST00000456385 Q6ZVH6 145 aa8.69□□□□□ -1.02
CLIP4-208ENST00000456385 ARL6IP6Q8N6S5 226 aa8.69□□□□□ -1.02
CLIP4-208ENST00000456385 ZNF709Q8N972 641 aa8.69□□□□□ -1.02
CLIP4-208ENST00000456385 OR5A2Q8NGI9 324 aa8.69□□□□□ -1.02
CLIP4-208ENST00000456385 CPT1CQ8TCG5 803 aa8.69□□□□□ -1.02
CLIP4-208ENST00000456385 SPSB4Q96A44 273 aa8.69□□□□□ -1.02
CLIP4-208ENST00000456385 SLC35E1Q96K37 410 aa8.69□□□□□ -1.02
CLIP4-208ENST00000456385 TECTBQ96PL2 329 aa8.69□□□□□ -1.02
CLIP4-208ENST00000456385 SAMD10Q9BYL1 202 aa8.69□□□□□ -1.02
CLIP4-208ENST00000456385 MTIF3Q9H2K0 278 aaKnown RBP8.69□□□□□ -1.02
CLIP4-208ENST00000456385 ZNF552Q9H707 407 aaPredicted RBP8.69□□□□□ -1.02
CLIP4-208ENST00000456385 FBXL7Q9UJT9 491 aa8.69□□□□□ -1.02
CLIP4-208ENST00000456385 SLC17A3O00476 420 aa8.69□□□□□ -1.02
CLIP4-208ENST00000456385 SH2D1BO14796 132 aa8.69□□□□□ -1.02
CLIP4-208ENST00000456385 CCL25O15444 150 aa8.69□□□□□ -1.02
CLIP4-208ENST00000456385 ZG16O60844 167 aa8.69□□□□□ -1.02
CLIP4-208ENST00000456385 CBR3O75828 277 aa8.69□□□□□ -1.02
CLIP4-208ENST00000456385 COL8A2P25067 703 aa8.69□□□□□ -1.02
CLIP4-208ENST00000456385 CD27P26842 260 aa8.69□□□□□ -1.02
CLIP4-208ENST00000456385 G6PCP35575 357 aa8.69□□□□□ -1.02
CLIP4-208ENST00000456385 KRTDAPP60985 99 aa8.69□□□□□ -1.02
CLIP4-208ENST00000456385 SELENOTP62341 195 aa8.69□□□□□ -1.02
CLIP4-208ENST00000456385 C9orf135Q5VTT2 229 aa8.69□□□□□ -1.02
CLIP4-208ENST00000456385 AAED1Q7RTV5 226 aa8.69□□□□□ -1.02
CLIP4-208ENST00000456385 BAGE3Q86Y29 109 aa8.69□□□□□ -1.02
CLIP4-208ENST00000456385 BAGE2Q86Y30 109 aa8.69□□□□□ -1.02
CLIP4-208ENST00000456385 MKXQ8IYA7 352 aa8.69□□□□□ -1.02
CLIP4-208ENST00000456385 TMEM147Q9BVK8 224 aa8.69□□□□□ -1.02
CLIP4-208ENST00000456385 C1QTNF5Q9BXJ0 243 aa8.69□□□□□ -1.02
CLIP4-208ENST00000456385 MRPL18Q9H0U6 180 aaKnown RBP8.69□□□□□ -1.02
CLIP4-208ENST00000456385 BRWD1Q9NSI6 2320 aa8.68□□□□□ -1.02
CLIP4-208ENST00000456385 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms