RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 RRHO14718 337 aa13.99□□□□□ -0.17
MSH6-207ENST00000456246 FABP7O15540 132 aa13.99□□□□□ -0.17
MSH6-207ENST00000456246 GSTP1P09211 210 aaKnown RBP13.99□□□□□ -0.17
MSH6-207ENST00000456246 HIST1H1DP16402 221 aaKnown RBP13.99□□□□□ -0.17
MSH6-207ENST00000456246 EGFEM1PQ0D2K5 195 aa13.99□□□□□ -0.17
MSH6-207ENST00000456246 TMEM65Q6PI78 240 aa13.99□□□□□ -0.17
MSH6-207ENST00000456246 C18orf65Q6ZTR6 163 aa13.99□□□□□ -0.17
MSH6-207ENST00000456246 C4orf3Q8WVX3 66 aa13.99□□□□□ -0.17
MSH6-207ENST00000456246 CABLES2Q9BTV7 478 aa13.99□□□□□ -0.17
MSH6-207ENST00000456246 TOLLIPQ9H0E2 274 aa13.99□□□□□ -0.17
MSH6-207ENST00000456246 PARP11Q9NR21 331 aa13.99□□□□□ -0.17
MSH6-207ENST00000456246 RDH8Q9NYR8 311 aa13.99□□□□□ -0.17
MSH6-207ENST00000456246 STUB1Q9UNE7 303 aa13.99□□□□□ -0.17
MSH6-207ENST00000456246 KCNK7Q9Y2U2 307 aa13.99□□□□□ -0.17
MSH6-207ENST00000456246 RAB27BO00194 218 aa13.98□□□□□ -0.17
MSH6-207ENST00000456246 ATP6V0E1O15342 81 aa13.98□□□□□ -0.17
MSH6-207ENST00000456246 SPDEFO95238 335 aa13.98□□□□□ -0.17
MSH6-207ENST00000456246 APOA2P02652 100 aa13.98□□□□□ -0.17
MSH6-207ENST00000456246 FCGR3AP08637 254 aa13.98□□□□□ -0.17
MSH6-207ENST00000456246 CNTFRP26992 372 aa13.98□□□□□ -0.17
MSH6-207ENST00000456246 PPIFP30405 207 aaKnown RBP13.98□□□□□ -0.17
MSH6-207ENST00000456246 PLGLAQ15195 96 aa13.98□□□□□ -0.17
MSH6-207ENST00000456246 SRSF7Q16629 238 aaKnown RBP eCLIP13.98□□□□□ -0.17
MSH6-207ENST00000456246 ZNF660Q6AZW8 331 aaPredicted RBP13.98□□□□□ -0.17
MSH6-207ENST00000456246 TPRA1Q86W33 373 aa13.98□□□□□ -0.17
MSH6-207ENST00000456246 TCTEX1D1Q8N7M0 179 aa13.98□□□□□ -0.17
MSH6-207ENST00000456246 MYOZ3Q8TDC0 251 aa13.98□□□□□ -0.17
MSH6-207ENST00000456246 RAX2Q96IS3 184 aa13.98□□□□□ -0.17
MSH6-207ENST00000456246 RITA1Q96K30 269 aa13.98□□□□□ -0.17
MSH6-207ENST00000456246 TRAV41A0A0B4J266 112 aa13.97□□□□□ -0.17
MSH6-207ENST00000456246 IGKV1-6A0A0C4DH72 117 aa13.97□□□□□ -0.17
MSH6-207ENST00000456246 NOTOA8MTQ0 251 aa13.97□□□□□ -0.17
MSH6-207ENST00000456246 SCGNO76038 276 aa13.97□□□□□ -0.17
MSH6-207ENST00000456246 TFAP2AP05549 437 aa13.97□□□□□ -0.17
MSH6-207ENST00000456246 CRIP2P52943 208 aaPredicted RBP13.97□□□□□ -0.17
MSH6-207ENST00000456246 PLA2G7Q13093 441 aa13.97□□□□□ -0.17
MSH6-207ENST00000456246 MOGAT2Q3SYC2 334 aa13.97□□□□□ -0.17
MSH6-207ENST00000456246 ZNF773Q6PK81 442 aa13.97□□□□□ -0.17
MSH6-207ENST00000456246 Q6ZS49 121 aa13.97□□□□□ -0.17
MSH6-207ENST00000456246 PDPNQ86YL7 162 aa13.97□□□□□ -0.17
MSH6-207ENST00000456246 OR5M8Q8NGP6 311 aa13.97□□□□□ -0.17
MSH6-207ENST00000456246 OR10J5Q8NHC4 309 aa13.97□□□□□ -0.17
MSH6-207ENST00000456246 UBE2E2Q96LR5 201 aa13.97□□□□□ -0.17
MSH6-207ENST00000456246 TSNAXQ99598 290 aaKnown RBP13.97□□□□□ -0.17
MSH6-207ENST00000456246 RNF150Q9ULK6 438 aa13.97□□□□□ -0.17
MSH6-207ENST00000456246 SSR3Q9UNL2 185 aa13.97□□□□□ -0.17
MSH6-207ENST00000456246 GNB3P16520 340 aa13.96□□□□□ -0.17
MSH6-207ENST00000456246 TALDO1P37837 337 aa13.96□□□□□ -0.17
MSH6-207ENST00000456246 DCTN2Q13561 401 aaKnown RBP13.96□□□□□ -0.17
MSH6-207ENST00000456246 GLDNQ6ZMI3 551 aaPredicted RBP13.96□□□□□ -0.17
MSH6-207ENST00000456246 LCNL1Q6ZST4 164 aa13.96□□□□□ -0.17
MSH6-207ENST00000456246 RBMXL1Q96E39 390 aaKnown RBP13.96□□□□□ -0.17
MSH6-207ENST00000456246 FBXL15Q9H469 300 aa13.96□□□□□ -0.17
MSH6-207ENST00000456246 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.96□□□□□ -0.17
MSH6-207ENST00000456246 TXNL4BQ9NX01 149 aaKnown RBP13.96□□□□□ -0.17
MSH6-207ENST00000456246 GAB2Q9UQC2 676 aa13.96□□□□□ -0.17
MSH6-207ENST00000456246 WSB1Q9Y6I7 421 aa13.96□□□□□ -0.17
MSH6-207ENST00000456246 TRBV6-7A0A0A0MS04 114 aa13.95□□□□□ -0.18
MSH6-207ENST00000456246 BET1O15155 118 aa13.95□□□□□ -0.18
MSH6-207ENST00000456246 IGLV1-40P01703 118 aa13.95□□□□□ -0.18
MSH6-207ENST00000456246 RAB25P57735 213 aa13.95□□□□□ -0.18
MSH6-207ENST00000456246 CX3CL1P78423 397 aa13.95□□□□□ -0.18
MSH6-207ENST00000456246 RUNX1Q01196 453 aa13.95□□□□□ -0.18
MSH6-207ENST00000456246 TAGLNQ01995 201 aaKnown RBP13.95□□□□□ -0.18
MSH6-207ENST00000456246 TMEM267Q0VDI3 215 aaPredicted RBP13.95□□□□□ -0.18
MSH6-207ENST00000456246 ARFRP1Q13795 201 aa13.95□□□□□ -0.18
MSH6-207ENST00000456246 MINDY2Q8NBR6 621 aa13.95□□□□□ -0.18
MSH6-207ENST00000456246 ATG5Q9H1Y0 275 aa13.95□□□□□ -0.18
MSH6-207ENST00000456246 VSIG4Q9Y279 399 aa13.95□□□□□ -0.18
MSH6-207ENST00000456246 A0A075B6Q4 140 aa13.94□□□□□ -0.18
MSH6-207ENST00000456246 G3V318 75 aa13.94□□□□□ -0.18
MSH6-207ENST00000456246 M0R1X1 148 aa13.94□□□□□ -0.18
MSH6-207ENST00000456246 PROP1O75360 226 aa13.94□□□□□ -0.18
MSH6-207ENST00000456246 DTYMKP23919 212 aa13.94□□□□□ -0.18
MSH6-207ENST00000456246 FHL3Q13643 280 aa13.94□□□□□ -0.18
MSH6-207ENST00000456246 PYHIN1Q6K0P9 492 aa13.94□□□□□ -0.18
MSH6-207ENST00000456246 NR2C2APQ86WQ0 139 aa13.94□□□□□ -0.18
MSH6-207ENST00000456246 FLYWCH2Q96CP2 140 aaKnown RBP13.94□□□□□ -0.18
MSH6-207ENST00000456246 DUX3Q96PT4 197 aa13.94□□□□□ -0.18
MSH6-207ENST00000456246 GINS4Q9BRT9 223 aa13.94□□□□□ -0.18
MSH6-207ENST00000456246 OR2D2Q9H210 308 aa13.94□□□□□ -0.18
MSH6-207ENST00000456246 METTL1Q9UBP6 276 aaKnown RBP13.94□□□□□ -0.18
MSH6-207ENST00000456246 FOXA2Q9Y261 457 aaPredicted RBP13.94□□□□□ -0.18
MSH6-207ENST00000456246 A0A0B4J203 849 aa13.93□□□□□ -0.18
MSH6-207ENST00000456246 GSTT2P0CG29 244 aa13.93□□□□□ -0.18
MSH6-207ENST00000456246 GSTT2BP0CG30 244 aa13.93□□□□□ -0.18
MSH6-207ENST00000456246 HOXD3P31249 432 aaPredicted RBP13.93□□□□□ -0.18
MSH6-207ENST00000456246 SCAND1P57086 179 aa13.93□□□□□ -0.18
MSH6-207ENST00000456246 RPS16P62249 146 aaKnown RBP13.93□□□□□ -0.18
MSH6-207ENST00000456246 PITPNAQ00169 270 aa13.93□□□□□ -0.18
MSH6-207ENST00000456246 NDPQ00604 133 aa13.93□□□□□ -0.18
MSH6-207ENST00000456246 CBX3Q13185 183 aa13.93□□□□□ -0.18
MSH6-207ENST00000456246 PSG5Q15238 335 aa13.93□□□□□ -0.18
MSH6-207ENST00000456246 ECSCRQ19T08 205 aa13.93□□□□□ -0.18
MSH6-207ENST00000456246 DEFB136Q30KP8 78 aa13.93□□□□□ -0.18
MSH6-207ENST00000456246 C19orf54Q5BKX5 351 aa13.93□□□□□ -0.18
MSH6-207ENST00000456246 IGSF11Q5DX21 431 aa13.93□□□□□ -0.18
MSH6-207ENST00000456246 C9orf66Q5T8R8 295 aa13.93□□□□□ -0.18
MSH6-207ENST00000456246 ZNF562Q6V9R5 426 aa13.93□□□□□ -0.18
MSH6-207ENST00000456246 ZNF491Q8N8L2 437 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms