RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 C17orf98A8MV24 154 aa12.57□□□□□ -0.4
LDLR-202ENST00000455727 M0R036 132 aa12.57□□□□□ -0.4
LDLR-202ENST00000455727 MGST3O14880 152 aa12.57□□□□□ -0.4
LDLR-202ENST00000455727 RAB29O14966 203 aa12.57□□□□□ -0.4
LDLR-202ENST00000455727 SNRNP70P08621 437 aaKnown RBP12.57□□□□□ -0.4
LDLR-202ENST00000455727 OR13C7P0DN81 318 aa12.57□□□□□ -0.4
LDLR-202ENST00000455727 CEACAM8P31997 349 aaPredicted RBP12.57□□□□□ -0.4
LDLR-202ENST00000455727 G6PCP35575 357 aa12.57□□□□□ -0.4
LDLR-202ENST00000455727 KLF3P57682 345 aaPredicted RBP12.57□□□□□ -0.4
LDLR-202ENST00000455727 SPANXN5Q5MJ07 72 aa12.57□□□□□ -0.4
LDLR-202ENST00000455727 GCSAMQ8N6F7 178 aa12.57□□□□□ -0.4
LDLR-202ENST00000455727 TPRX1Q8N7U7 411 aa12.57□□□□□ -0.4
LDLR-202ENST00000455727 CLCC1Q96S66 551 aa12.57□□□□□ -0.4
LDLR-202ENST00000455727 DIDO1Q9BTC0 2240 aaKnown RBP12.57□□□□□ -0.4
LDLR-202ENST00000455727 ASPMQ8IZT6 3477 aa12.57□□□□□ -0.4
LDLR-202ENST00000455727 ODAMA1E959 279 aa12.56□□□□□ -0.4
LDLR-202ENST00000455727 S1PR2O95136 353 aa12.56□□□□□ -0.4
LDLR-202ENST00000455727 LHBP01229 141 aa12.56□□□□□ -0.4
LDLR-202ENST00000455727 RAB13P51153 203 aa12.56□□□□□ -0.4
LDLR-202ENST00000455727 ZNF816Q0VGE8 651 aaPredicted RBP12.56□□□□□ -0.4
LDLR-202ENST00000455727 RNF212Q495C1 297 aa12.56□□□□□ -0.4
LDLR-202ENST00000455727 LILRB2Q8N423 598 aa12.56□□□□□ -0.4
LDLR-202ENST00000455727 PRSS33Q8NF86 280 aa12.56□□□□□ -0.4
LDLR-202ENST00000455727 CLDND2Q8NHS1 167 aa12.56□□□□□ -0.4
LDLR-202ENST00000455727 CD300LFQ8TDQ1 290 aa12.56□□□□□ -0.4
LDLR-202ENST00000455727 MBD3L1Q8WWY6 194 aa12.56□□□□□ -0.4
LDLR-202ENST00000455727 MEGF10Q96KG7 1140 aa12.56□□□□□ -0.4
LDLR-202ENST00000455727 WDR61Q9GZS3 305 aaKnown RBP12.56□□□□□ -0.4
LDLR-202ENST00000455727 NCOR1P1Q9H4R4 102 aa12.56□□□□□ -0.4
LDLR-202ENST00000455727 ESRP2Q9H6T0 727 aaKnown RBP12.56□□□□□ -0.4
LDLR-202ENST00000455727 SCAF4O95104 1147 aaKnown RBP12.56□□□□□ -0.4
LDLR-202ENST00000455727 SRP19P09132 144 aaKnown RBP12.56□□□□□ -0.4
LDLR-202ENST00000455727 HOXA1P49639 335 aaPredicted RBP12.56□□□□□ -0.4
LDLR-202ENST00000455727 ICAM4Q14773 271 aa12.56□□□□□ -0.4
LDLR-202ENST00000455727 ATP6V1FQ16864 119 aa12.56□□□□□ -0.4
LDLR-202ENST00000455727 KHDC3LQ587J8 217 aa12.56□□□□□ -0.4
LDLR-202ENST00000455727 RPRMLQ8N4K4 120 aa12.56□□□□□ -0.4
LDLR-202ENST00000455727 RFESDQ8TAC1 157 aa12.56□□□□□ -0.4
LDLR-202ENST00000455727 C14orf79Q96F83 325 aa12.56□□□□□ -0.4
LDLR-202ENST00000455727 OR2V2Q96R30 315 aa12.56□□□□□ -0.4
LDLR-202ENST00000455727 RSG1Q9BU20 258 aa12.56□□□□□ -0.4
LDLR-202ENST00000455727 RPRMQ9NS64 109 aa12.56□□□□□ -0.4
LDLR-202ENST00000455727 JPT1Q9UK76 154 aa12.56□□□□□ -0.4
LDLR-202ENST00000455727 SPENQ96T58 3664 aaKnown RBP12.56□□□□□ -0.4
LDLR-202ENST00000455727 YPEL1O60688 119 aa12.55□□□□□ -0.4
LDLR-202ENST00000455727 MT-ND4LP03901 98 aa12.55□□□□□ -0.4
LDLR-202ENST00000455727 AKIRIN2Q53H80 203 aa12.55□□□□□ -0.4
LDLR-202ENST00000455727 FAM57AQ8TBR7 257 aa12.55□□□□□ -0.4
LDLR-202ENST00000455727 PINX1Q96BK5 328 aaKnown RBP12.55□□□□□ -0.4
LDLR-202ENST00000455727 YPEL2Q96QA6 119 aa12.55□□□□□ -0.4
LDLR-202ENST00000455727 OR4C12Q96R67 309 aa12.55□□□□□ -0.4
LDLR-202ENST00000455727 MRPL37Q9BZE1 423 aaKnown RBP12.55□□□□□ -0.4
LDLR-202ENST00000455727 PSG11Q9UQ72 335 aa12.55□□□□□ -0.4
LDLR-202ENST00000455727 TIMM9Q9Y5J7 89 aa12.55□□□□□ -0.4
LDLR-202ENST00000455727 LINC00473A8K010 186 aa12.55□□□□□ -0.4
LDLR-202ENST00000455727 KLK10O43240 276 aa12.55□□□□□ -0.4
LDLR-202ENST00000455727 NBL1P41271 181 aa12.55□□□□□ -0.4
LDLR-202ENST00000455727 AKR1C3P42330 323 aa12.55□□□□□ -0.4
LDLR-202ENST00000455727 GATA4P43694 442 aa12.55□□□□□ -0.4
LDLR-202ENST00000455727 RPS23P62266 143 aaKnown RBP12.55□□□□□ -0.4
LDLR-202ENST00000455727 SLC38A11Q08AI6 406 aa12.55□□□□□ -0.4
LDLR-202ENST00000455727 EDDM3AQ14507 147 aa12.55□□□□□ -0.4
LDLR-202ENST00000455727 HAGHQ16775 308 aa12.55□□□□□ -0.4
LDLR-202ENST00000455727 OR2B11Q5JQS5 317 aa12.55□□□□□ -0.4
LDLR-202ENST00000455727 BTNL3Q6UXE8 466 aa12.55□□□□□ -0.4
LDLR-202ENST00000455727 H2BFWTQ7Z2G1 175 aa12.55□□□□□ -0.4
LDLR-202ENST00000455727 CENPVQ7Z7K6 275 aaPredicted RBP12.55□□□□□ -0.4
LDLR-202ENST00000455727 OR10G4Q8NGN3 311 aa12.55□□□□□ -0.4
LDLR-202ENST00000455727 CIB3Q96Q77 187 aaPredicted RBP12.55□□□□□ -0.4
LDLR-202ENST00000455727 IGHV3-43A0A0B4J1X8 118 aa12.54□□□□□ -0.4
LDLR-202ENST00000455727 IGHV3-43DP0DP04 118 aa12.54□□□□□ -0.4
LDLR-202ENST00000455727 MORN2Q502X0 79 aa12.54□□□□□ -0.4
LDLR-202ENST00000455727 TAF15Q92804 592 aaKnown RBP eCLIP12.54□□□□□ -0.4
LDLR-202ENST00000455727 HIST1H2BAQ96A08 127 aa12.54□□□□□ -0.4
LDLR-202ENST00000455727 DCTN5Q9BTE1 182 aa12.54□□□□□ -0.4
LDLR-202ENST00000455727 F2RL2O00254 374 aa12.54□□□□□ -0.4
LDLR-202ENST00000455727 ST8SIA5O15466 376 aa12.54□□□□□ -0.4
LDLR-202ENST00000455727 Q3ZCU0 254 aa12.54□□□□□ -0.4
LDLR-202ENST00000455727 BIN3Q9NQY0 253 aa12.54□□□□□ -0.4
LDLR-202ENST00000455727 A8MXE2 369 aa12.53□□□□□ -0.4
LDLR-202ENST00000455727 DEFB108AA8MXU0 73 aa12.53□□□□□ -0.4
LDLR-202ENST00000455727 K7EM74 188 aa12.53□□□□□ -0.4
LDLR-202ENST00000455727 DUTP33316 252 aaKnown RBP12.53□□□□□ -0.4
LDLR-202ENST00000455727 TMEM41BQ5BJD5 291 aa12.53□□□□□ -0.4
LDLR-202ENST00000455727 MOGAT3Q86VF5 341 aa12.53□□□□□ -0.4
LDLR-202ENST00000455727 C20orf24Q9BUV8 137 aa12.53□□□□□ -0.4
LDLR-202ENST00000455727 CADP27708 2225 aa12.53□□□□□ -0.4
LDLR-202ENST00000455727 LOC102723971A0A1B0GUV8 181 aa12.53□□□□□ -0.4
LDLR-202ENST00000455727 PCP4L1A6NKN8 68 aa12.53□□□□□ -0.4
LDLR-202ENST00000455727 FAM90A9PA6NNJ1 464 aa12.53□□□□□ -0.4
LDLR-202ENST00000455727 LY86O95711 162 aa12.53□□□□□ -0.4
LDLR-202ENST00000455727 RPL35P42766 123 aaKnown RBP12.53□□□□□ -0.4
LDLR-202ENST00000455727 GPR12P47775 334 aa12.53□□□□□ -0.4
LDLR-202ENST00000455727 AKR1D1P51857 326 aa12.53□□□□□ -0.4
LDLR-202ENST00000455727 LOXL3P58215 753 aa12.53□□□□□ -0.4
LDLR-202ENST00000455727 PMS2P11Q13670 270 aa12.53□□□□□ -0.4
LDLR-202ENST00000455727 AARDQ4LEZ3 155 aa12.53□□□□□ -0.4
LDLR-202ENST00000455727 DTD1Q8TEA8 209 aa12.53□□□□□ -0.4
LDLR-202ENST00000455727 FAM222BQ8WU58 562 aa12.53□□□□□ -0.4
LDLR-202ENST00000455727 RAB9BQ9NP90 201 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms