RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 SMR3AQ99954 134 aa13.45□□□□□ -0.26
CCDC90B-202ENST00000455220 RTBDNQ9BSG5 229 aaPredicted RBP13.45□□□□□ -0.26
CCDC90B-202ENST00000455220 C5orf66Q9H5L9 145 aa13.45□□□□□ -0.26
CCDC90B-202ENST00000455220 TMEM160Q9NX00 188 aa13.45□□□□□ -0.26
CCDC90B-202ENST00000455220 DPM3Q9P2X0 92 aa13.45□□□□□ -0.26
CCDC90B-202ENST00000455220 F8P00451 2351 aa13.44□□□□□ -0.26
CCDC90B-202ENST00000455220 LEUTXA8MZ59 168 aa13.44□□□□□ -0.26
CCDC90B-202ENST00000455220 HSD17B6O14756 317 aa13.44□□□□□ -0.26
CCDC90B-202ENST00000455220 LY6G6DO95868 133 aa13.44□□□□□ -0.26
CCDC90B-202ENST00000455220 SAA4P35542 130 aa13.44□□□□□ -0.26
CCDC90B-202ENST00000455220 LGALS4P56470 323 aa13.44□□□□□ -0.26
CCDC90B-202ENST00000455220 RPL39P5Q59GN2 51 aa13.44□□□□□ -0.26
CCDC90B-202ENST00000455220 LHFPL4Q7Z7J7 247 aa13.44□□□□□ -0.26
CCDC90B-202ENST00000455220 NANPQ8TBE9 248 aa13.44□□□□□ -0.26
CCDC90B-202ENST00000455220 S1PR3Q99500 378 aa13.44□□□□□ -0.26
CCDC90B-202ENST00000455220 C20orf85Q9H1P6 137 aa13.44□□□□□ -0.26
CCDC90B-202ENST00000455220 YAE1D1Q9NRH1 226 aa13.44□□□□□ -0.26
CCDC90B-202ENST00000455220 NUBP2Q9Y5Y2 271 aa13.44□□□□□ -0.26
CCDC90B-202ENST00000455220 NAV3Q8IVL0 2385 aa13.44□□□□□ -0.26
CCDC90B-202ENST00000455220 IGHV3OR16-10A0A075B7F0 116 aa13.43□□□□□ -0.26
CCDC90B-202ENST00000455220 PI3P19957 117 aa13.43□□□□□ -0.26
CCDC90B-202ENST00000455220 CEACAM3P40198 252 aa13.43□□□□□ -0.26
CCDC90B-202ENST00000455220 RND3P61587 244 aa13.43□□□□□ -0.26
CCDC90B-202ENST00000455220 ZNF816Q0VGE8 651 aaPredicted RBP13.43□□□□□ -0.26
CCDC90B-202ENST00000455220 DIAPH2-AS1Q14236 149 aa13.43□□□□□ -0.26
CCDC90B-202ENST00000455220 TPTE2P1Q5T6R2 138 aa13.43□□□□□ -0.26
CCDC90B-202ENST00000455220 RUSC1-AS1Q66K80 236 aa13.43□□□□□ -0.26
CCDC90B-202ENST00000455220 CMTM1Q8IZ96 169 aa13.43□□□□□ -0.26
CCDC90B-202ENST00000455220 SLC2A9Q9NRM0 540 aa13.43□□□□□ -0.26
CCDC90B-202ENST00000455220 NUDT15Q9NV35 164 aa13.43□□□□□ -0.26
CCDC90B-202ENST00000455220 OOSP1A8MZH6 123 aa13.42□□□□□ -0.26
CCDC90B-202ENST00000455220 OXA1LQ15070 435 aa13.42□□□□□ -0.26
CCDC90B-202ENST00000455220 FAM120AOSQ5T036 256 aa13.42□□□□□ -0.26
CCDC90B-202ENST00000455220 BRD3OSQ6XYD6 125 aa13.42□□□□□ -0.26
CCDC90B-202ENST00000455220 C9orf139Q6ZV77 190 aa13.42□□□□□ -0.26
CCDC90B-202ENST00000455220 RTN4IP1Q8WWV3 396 aaPredicted RBP13.42□□□□□ -0.26
CCDC90B-202ENST00000455220 RPEQ96AT9 228 aa13.42□□□□□ -0.26
CCDC90B-202ENST00000455220 NUP50Q9UKX7 468 aa13.42□□□□□ -0.26
CCDC90B-202ENST00000455220 FLVCR2Q9UPI3 526 aa13.42□□□□□ -0.26
CCDC90B-202ENST00000455220 C14orf166Q9Y224 244 aaKnown RBP13.42□□□□□ -0.26
CCDC90B-202ENST00000455220 HIVEP2P31629 2446 aa13.42□□□□□ -0.26
CCDC90B-202ENST00000455220 M0R1X1 148 aa13.41□□□□□ -0.26
CCDC90B-202ENST00000455220 ARPC1BO15143 372 aaKnown RBP13.41□□□□□ -0.26
CCDC90B-202ENST00000455220 TXNL1O43396 289 aa13.41□□□□□ -0.26
CCDC90B-202ENST00000455220 SPNP16150 400 aa13.41□□□□□ -0.26
CCDC90B-202ENST00000455220 EPHA1P21709 976 aa13.41□□□□□ -0.26
CCDC90B-202ENST00000455220 DUTP33316 252 aaKnown RBP13.41□□□□□ -0.26
CCDC90B-202ENST00000455220 MECP2P51608 486 aaKnown RBP13.41□□□□□ -0.26
CCDC90B-202ENST00000455220 PIGPP57054 158 aa13.41□□□□□ -0.26
CCDC90B-202ENST00000455220 ABCA11PQ4W5N1 156 aa13.41□□□□□ -0.26
CCDC90B-202ENST00000455220 PHLDA2Q53GA4 152 aa13.41□□□□□ -0.26
CCDC90B-202ENST00000455220 PLET1Q6UQ28 207 aa13.41□□□□□ -0.26
CCDC90B-202ENST00000455220 ZNF66Q6ZN08 573 aa13.41□□□□□ -0.26
CCDC90B-202ENST00000455220 C17orf50Q8WW18 174 aa13.41□□□□□ -0.26
CCDC90B-202ENST00000455220 TMEM230Q96A57 120 aa13.41□□□□□ -0.26
CCDC90B-202ENST00000455220 MALSU1Q96EH3 234 aa13.41□□□□□ -0.26
CCDC90B-202ENST00000455220 HSD17B10Q99714 261 aaKnown RBP13.41□□□□□ -0.26
CCDC90B-202ENST00000455220 PGLYRP1O75594 196 aaPredicted RBP13.41□□□□□ -0.26
CCDC90B-202ENST00000455220 GAPDHP04406 335 aaKnown RBP13.41□□□□□ -0.26
CCDC90B-202ENST00000455220 CCBE1Q6UXH8 406 aaPredicted RBP13.41□□□□□ -0.26
CCDC90B-202ENST00000455220 CLEC9AQ6UXN8 241 aa13.41□□□□□ -0.26
CCDC90B-202ENST00000455220 TGIF2LXQ8IUE1 241 aa13.41□□□□□ -0.26
CCDC90B-202ENST00000455220 DYNAPQ8N1N2 210 aa13.41□□□□□ -0.26
CCDC90B-202ENST00000455220 CENPSQ8N2Z9 138 aa13.41□□□□□ -0.26
CCDC90B-202ENST00000455220 ADAD2Q8NCV1 583 aaKnown RBP13.41□□□□□ -0.26
CCDC90B-202ENST00000455220 CHPT1Q8WUD6 406 aa13.41□□□□□ -0.26
CCDC90B-202ENST00000455220 MARVELD1Q9BSK0 173 aa13.41□□□□□ -0.26
CCDC90B-202ENST00000455220 TRAV6A0A075B6T7 132 aa13.4□□□□□ -0.26
CCDC90B-202ENST00000455220 A0A1W2PPI3 338 aa13.4□□□□□ -0.26
CCDC90B-202ENST00000455220 TNFSF12O43508 249 aa13.4□□□□□ -0.26
CCDC90B-202ENST00000455220 RLN1P04808 185 aa13.4□□□□□ -0.26
CCDC90B-202ENST00000455220 H2AFB2P0C5Z0 115 aa13.4□□□□□ -0.26
CCDC90B-202ENST00000455220 CT45A6P0DMU7 189 aa13.4□□□□□ -0.26
CCDC90B-202ENST00000455220 CT45A5P0DMU8 189 aa13.4□□□□□ -0.26
CCDC90B-202ENST00000455220 CT45A7P0DMV0 189 aa13.4□□□□□ -0.26
CCDC90B-202ENST00000455220 S100GP29377 79 aa13.4□□□□□ -0.26
CCDC90B-202ENST00000455220 REG1BP48304 166 aa13.4□□□□□ -0.26
CCDC90B-202ENST00000455220 RAG2P55895 527 aa13.4□□□□□ -0.26
CCDC90B-202ENST00000455220 TMED4Q7Z7H5 227 aa13.4□□□□□ -0.26
CCDC90B-202ENST00000455220 SLC25A42Q86VD7 318 aa13.4□□□□□ -0.26
CCDC90B-202ENST00000455220 OR8H3Q8N146 312 aa13.4□□□□□ -0.26
CCDC90B-202ENST00000455220 CCDC71LQ8N9Z2 235 aa13.4□□□□□ -0.26
CCDC90B-202ENST00000455220 MINDY2Q8NBR6 621 aa13.4□□□□□ -0.26
CCDC90B-202ENST00000455220 GPHA2Q96T91 129 aa13.4□□□□□ -0.26
CCDC90B-202ENST00000455220 NABP2Q9BQ15 211 aa13.4□□□□□ -0.26
CCDC90B-202ENST00000455220 MRPL20Q9BYC9 149 aaKnown RBP13.4□□□□□ -0.26
CCDC90B-202ENST00000455220 ALX4Q9H161 411 aaPredicted RBP13.4□□□□□ -0.26
CCDC90B-202ENST00000455220 HILPDAQ9Y5L2 63 aa13.4□□□□□ -0.26
CCDC90B-202ENST00000455220 ZFHX3Q15911 3703 aa13.4□□□□□ -0.26
CCDC90B-202ENST00000455220 IGHV1-3A0A0C4DH29 117 aa13.39□□□□□ -0.27
CCDC90B-202ENST00000455220 A0A0U1RQK1 487 aa13.39□□□□□ -0.27
CCDC90B-202ENST00000455220 CRYM-AS1A6NIL9 109 aa13.39□□□□□ -0.27
CCDC90B-202ENST00000455220 LINC00473A8K010 186 aa13.39□□□□□ -0.27
CCDC90B-202ENST00000455220 MPPED1O15442 326 aa13.39□□□□□ -0.27
CCDC90B-202ENST00000455220 THBS3P49746 956 aa13.39□□□□□ -0.27
CCDC90B-202ENST00000455220 TAS2R31P59538 309 aa13.39□□□□□ -0.27
CCDC90B-202ENST00000455220 UBE2MP61081 183 aaKnown RBP13.39□□□□□ -0.27
CCDC90B-202ENST00000455220 RPL30P62888 115 aaKnown RBP13.39□□□□□ -0.27
CCDC90B-202ENST00000455220 DHODHQ02127 395 aa13.39□□□□□ -0.27
CCDC90B-202ENST00000455220 SSX2Q16385 188 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms