RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 CASTOR1Q8WTX7 329 aa14.33□□□□□ -0.12
UBE2D4-208ENST00000454350 URM1Q9BTM9 101 aaKnown RBP14.33□□□□□ -0.12
UBE2D4-208ENST00000454350 ALX4Q9H161 411 aaPredicted RBP14.33□□□□□ -0.12
UBE2D4-208ENST00000454350 KIAA1456Q9P272 454 aa14.33□□□□□ -0.12
UBE2D4-208ENST00000454350 KCNK7Q9Y2U2 307 aa14.33□□□□□ -0.12
UBE2D4-208ENST00000454350 WASHC3Q9Y3C0 194 aa14.33□□□□□ -0.12
UBE2D4-208ENST00000454350 TPRKBQ9Y3C4 175 aa14.33□□□□□ -0.12
UBE2D4-208ENST00000454350 RYR3Q15413 4870 aa14.33□□□□□ -0.12
UBE2D4-208ENST00000454350 RGS10O43665 173 aa14.32□□□□□ -0.12
UBE2D4-208ENST00000454350 OR8U8P0C7N1 319 aa14.32□□□□□ -0.12
UBE2D4-208ENST00000454350 HSMCR30P0CW71 290 aa14.32□□□□□ -0.12
UBE2D4-208ENST00000454350 ZBTB25P24278 435 aa14.32□□□□□ -0.12
UBE2D4-208ENST00000454350 MC5RP33032 325 aa14.32□□□□□ -0.12
UBE2D4-208ENST00000454350 VEGFCP49767 419 aa14.32□□□□□ -0.12
UBE2D4-208ENST00000454350 DCUN1D4Q92564 292 aa14.32□□□□□ -0.12
UBE2D4-208ENST00000454350 WWC2-AS2Q96NR7 200 aa14.32□□□□□ -0.12
UBE2D4-208ENST00000454350 PECRQ9BY49 303 aa14.32□□□□□ -0.12
UBE2D4-208ENST00000454350 GHITMQ9H3K2 345 aa14.32□□□□□ -0.12
UBE2D4-208ENST00000454350 PLGRKTQ9HBL7 147 aa14.32□□□□□ -0.12
UBE2D4-208ENST00000454350 C12orf4Q9NQ89 552 aa14.32□□□□□ -0.12
UBE2D4-208ENST00000454350 A0A1W2PN81 502 aa14.31□□□□□ -0.12
UBE2D4-208ENST00000454350 ARL6IP5O75915 188 aa14.31□□□□□ -0.12
UBE2D4-208ENST00000454350 IGKV1-16P04430 117 aa14.31□□□□□ -0.12
UBE2D4-208ENST00000454350 CHRNA7P36544 502 aa14.31□□□□□ -0.12
UBE2D4-208ENST00000454350 MAP2K4P45985 399 aa14.31□□□□□ -0.12
UBE2D4-208ENST00000454350 TRAM1Q15629 374 aa14.31□□□□□ -0.12
UBE2D4-208ENST00000454350 RAB11BQ15907 218 aa14.31□□□□□ -0.12
UBE2D4-208ENST00000454350 ECSCRQ19T08 205 aa14.31□□□□□ -0.12
UBE2D4-208ENST00000454350 C2orf76Q3KRA6 126 aa14.31□□□□□ -0.12
UBE2D4-208ENST00000454350 CD200R1LQ6Q8B3 271 aa14.31□□□□□ -0.12
UBE2D4-208ENST00000454350 ZNF383Q8NA42 475 aa14.31□□□□□ -0.12
UBE2D4-208ENST00000454350 DRAXINQ8NBI3 349 aaPredicted RBP14.31□□□□□ -0.12
UBE2D4-208ENST00000454350 FAM3DQ96BQ1 224 aa14.31□□□□□ -0.12
UBE2D4-208ENST00000454350 MGLLQ99685 303 aa14.31□□□□□ -0.12
UBE2D4-208ENST00000454350 RNF5Q99942 180 aa14.31□□□□□ -0.12
UBE2D4-208ENST00000454350 TOLLIPQ9H0E2 274 aa14.31□□□□□ -0.12
UBE2D4-208ENST00000454350 RNF150Q9ULK6 438 aa14.31□□□□□ -0.12
UBE2D4-208ENST00000454350 FOXA2Q9Y261 457 aaPredicted RBP14.31□□□□□ -0.12
UBE2D4-208ENST00000454350 SHISA3A0PJX4 238 aa14.3□□□□□ -0.12
UBE2D4-208ENST00000454350 RBBP9O75884 186 aa14.3□□□□□ -0.12
UBE2D4-208ENST00000454350 NHLRC4P0CG21 123 aaPredicted RBP14.3□□□□□ -0.12
UBE2D4-208ENST00000454350 PSMA1P25786 263 aaKnown RBP14.3□□□□□ -0.12
UBE2D4-208ENST00000454350 CALRP27797 417 aaKnown RBP14.3□□□□□ -0.12
UBE2D4-208ENST00000454350 INSL3P51460 131 aa14.3□□□□□ -0.12
UBE2D4-208ENST00000454350 SSBP2P81877 361 aaPredicted RBP14.3□□□□□ -0.12
UBE2D4-208ENST00000454350 PSG5Q15238 335 aa14.3□□□□□ -0.12
UBE2D4-208ENST00000454350 PRSS48Q7RTY5 328 aa14.3□□□□□ -0.12
UBE2D4-208ENST00000454350 EDARADDQ8WWZ3 215 aa14.3□□□□□ -0.12
UBE2D4-208ENST00000454350 MGAT4AQ9UM21 535 aa14.3□□□□□ -0.12
UBE2D4-208ENST00000454350 ZNF256Q9Y2P7 627 aaPredicted RBP14.3□□□□□ -0.12
UBE2D4-208ENST00000454350 TMEM272A0A1B0GTI8 110 aa14.29□□□□□ -0.12
UBE2D4-208ENST00000454350 H7C2Y5 167 aa14.29□□□□□ -0.12
UBE2D4-208ENST00000454350 GSTP1P09211 210 aaKnown RBP14.29□□□□□ -0.12
UBE2D4-208ENST00000454350 SSX1Q16384 188 aa14.29□□□□□ -0.12
UBE2D4-208ENST00000454350 MOGAT2Q3SYC2 334 aa14.29□□□□□ -0.12
UBE2D4-208ENST00000454350 AKIRIN2Q53H80 203 aa14.29□□□□□ -0.12
UBE2D4-208ENST00000454350 TCTEX1D1Q8N7M0 179 aa14.29□□□□□ -0.12
UBE2D4-208ENST00000454350 DLX4Q92988 240 aaPredicted RBP14.29□□□□□ -0.12
UBE2D4-208ENST00000454350 CMSS1Q9BQ75 279 aaKnown RBP14.29□□□□□ -0.12
UBE2D4-208ENST00000454350 FAM103A1Q9BTL3 118 aaKnown RBP14.29□□□□□ -0.12
UBE2D4-208ENST00000454350 V9GY05 133 aa14.29□□□□□ -0.12
UBE2D4-208ENST00000454350 IGHV4OR15-8A0A075B7B6 117 aa14.28□□□□□ -0.12
UBE2D4-208ENST00000454350 A0A087WW49 117 aa14.28□□□□□ -0.12
UBE2D4-208ENST00000454350 TRDCB7Z8K6 153 aa14.28□□□□□ -0.12
UBE2D4-208ENST00000454350 OVOL1O14753 267 aa14.28□□□□□ -0.12
UBE2D4-208ENST00000454350 HSPA12AO43301 675 aa14.28□□□□□ -0.12
UBE2D4-208ENST00000454350 LGALS1P09382 135 aaKnown RBP14.28□□□□□ -0.12
UBE2D4-208ENST00000454350 SLURP1P55000 103 aa14.28□□□□□ -0.12
UBE2D4-208ENST00000454350 ZNF562Q6V9R5 426 aa14.28□□□□□ -0.12
UBE2D4-208ENST00000454350 PPP1R27Q86WC6 154 aa14.28□□□□□ -0.12
UBE2D4-208ENST00000454350 OR56B1Q8NGI3 324 aa14.28□□□□□ -0.12
UBE2D4-208ENST00000454350 RDH8Q9NYR8 311 aa14.28□□□□□ -0.12
UBE2D4-208ENST00000454350 METTL1Q9UBP6 276 aaKnown RBP14.28□□□□□ -0.12
UBE2D4-208ENST00000454350 A3GALT2U3KPV4 340 aa14.28□□□□□ -0.12
UBE2D4-208ENST00000454350 U3KQK5 164 aa14.28□□□□□ -0.12
UBE2D4-208ENST00000454350 ARPC1BO15143 372 aaKnown RBP14.27□□□□□ -0.13
UBE2D4-208ENST00000454350 DENRO43583 198 aaKnown RBP14.27□□□□□ -0.13
UBE2D4-208ENST00000454350 IGLV2-23P01705 113 aa14.27□□□□□ -0.13
UBE2D4-208ENST00000454350 CD3GP09693 182 aa14.27□□□□□ -0.13
UBE2D4-208ENST00000454350 HES5Q5TA89 166 aa14.27□□□□□ -0.13
UBE2D4-208ENST00000454350 LFNGQ8NES3 379 aa14.27□□□□□ -0.13
UBE2D4-208ENST00000454350 C5orf30Q96GV9 206 aa14.27□□□□□ -0.13
UBE2D4-208ENST00000454350 CLCC1Q96S66 551 aa14.27□□□□□ -0.13
UBE2D4-208ENST00000454350 CCDC90BQ9GZT6 254 aa14.27□□□□□ -0.13
UBE2D4-208ENST00000454350 ACOT13Q9NPJ3 140 aa14.27□□□□□ -0.13
UBE2D4-208ENST00000454350 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.27□□□□□ -0.13
UBE2D4-208ENST00000454350 LINC01619G3V211 115 aa14.26□□□□□ -0.13
UBE2D4-208ENST00000454350 SPDEFO95238 335 aa14.26□□□□□ -0.13
UBE2D4-208ENST00000454350 CA2P00918 260 aa14.26□□□□□ -0.13
UBE2D4-208ENST00000454350 TFAP2AP05549 437 aa14.26□□□□□ -0.13
UBE2D4-208ENST00000454350 CRYGBP07316 175 aa14.26□□□□□ -0.13
UBE2D4-208ENST00000454350 OR10A3P58181 314 aa14.26□□□□□ -0.13
UBE2D4-208ENST00000454350 PLGLAQ15195 96 aa14.26□□□□□ -0.13
UBE2D4-208ENST00000454350 TBCEQ15813 527 aaPredicted RBP14.26□□□□□ -0.13
UBE2D4-208ENST00000454350 ACTBL2Q562R1 376 aa14.26□□□□□ -0.13
UBE2D4-208ENST00000454350 IGSF11Q5DX21 431 aa14.26□□□□□ -0.13
UBE2D4-208ENST00000454350 UNQ5815/PRO19632Q6UWF5 114 aa14.26□□□□□ -0.13
UBE2D4-208ENST00000454350 ZNF429Q86V71 674 aa14.26□□□□□ -0.13
UBE2D4-208ENST00000454350 PDPNQ86YL7 162 aa14.26□□□□□ -0.13
UBE2D4-208ENST00000454350 OR4A4PQ8NGN8 299 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms