RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 HIST3H3Q16695 136 aa2.3□□□□□ -2.04
HMGN3P1-201ENST00000453847 KRTAP25-1Q3LHN0 102 aa2.3□□□□□ -2.04
HMGN3P1-201ENST00000453847 SPINT4Q6UDR6 99 aa2.3□□□□□ -2.04
HMGN3P1-201ENST00000453847 Q8NAQ8 132 aa2.3□□□□□ -2.04
HMGN3P1-201ENST00000453847 CCDC112Q8NEF3 446 aa2.3□□□□□ -2.04
HMGN3P1-201ENST00000453847 OR2T4Q8NH00 348 aa2.3□□□□□ -2.04
HMGN3P1-201ENST00000453847 DEDD2Q8WXF8 326 aa2.3□□□□□ -2.04
HMGN3P1-201ENST00000453847 SLC35B4Q969S0 331 aa2.3□□□□□ -2.04
HMGN3P1-201ENST00000453847 TRIB3Q96RU7 358 aa2.3□□□□□ -2.04
HMGN3P1-201ENST00000453847 C16orf95Q9H693 158 aa2.3□□□□□ -2.04
HMGN3P1-201ENST00000453847 HES4Q9HCC6 221 aa2.3□□□□□ -2.04
HMGN3P1-201ENST00000453847 EMC3Q9P0I2 261 aa2.3□□□□□ -2.04
HMGN3P1-201ENST00000453847 CARHSP1Q9Y2V2 147 aaKnown RBP2.3□□□□□ -2.04
HMGN3P1-201ENST00000453847 ZNF337Q9Y3M9 751 aa2.3□□□□□ -2.04
HMGN3P1-201ENST00000453847 ADGRL3Q9HAR2 1447 aa2.3□□□□□ -2.04
HMGN3P1-201ENST00000453847 PCF11O94913 1555 aaKnown RBP2.3□□□□□ -2.04
HMGN3P1-201ENST00000453847 TRPM3Q9HCF6 1732 aaPredicted RBP2.3□□□□□ -2.04
HMGN3P1-201ENST00000453847 SHANK3Q9BYB0 1731 aa2.29□□□□□ -2.04
HMGN3P1-201ENST00000453847 GRIN2BQ13224 1484 aa2.29□□□□□ -2.04
HMGN3P1-201ENST00000453847 FLT4P35916 1363 aa2.29□□□□□ -2.04
HMGN3P1-201ENST00000453847 SMIM9A6NGZ8 99 aa2.29□□□□□ -2.04
HMGN3P1-201ENST00000453847 CLDN24A6NM45 220 aa2.29□□□□□ -2.04
HMGN3P1-201ENST00000453847 FADS1O60427 444 aa2.29□□□□□ -2.04
HMGN3P1-201ENST00000453847 IGHV3-53P01767 116 aa2.29□□□□□ -2.04
HMGN3P1-201ENST00000453847 TNNC2P02585 160 aa2.29□□□□□ -2.04
HMGN3P1-201ENST00000453847 GUSBP08236 651 aa2.29□□□□□ -2.04
HMGN3P1-201ENST00000453847 DDTP30046 118 aa2.29□□□□□ -2.04
HMGN3P1-201ENST00000453847 S100A5P33763 92 aa2.29□□□□□ -2.04
HMGN3P1-201ENST00000453847 MARCKSL1P49006 195 aa2.29□□□□□ -2.04
HMGN3P1-201ENST00000453847 IDH3GP51553 393 aaPredicted RBP2.29□□□□□ -2.04
HMGN3P1-201ENST00000453847 SRSF6Q13247 344 aaKnown RBP2.29□□□□□ -2.04
HMGN3P1-201ENST00000453847 ZNF660Q6AZW8 331 aaPredicted RBP2.29□□□□□ -2.04
HMGN3P1-201ENST00000453847 SBSNQ6UWP8 590 aa2.29□□□□□ -2.04
HMGN3P1-201ENST00000453847 Q6ZQT7 251 aa2.29□□□□□ -2.04
HMGN3P1-201ENST00000453847 SLC51BQ86UW2 128 aa2.29□□□□□ -2.04
HMGN3P1-201ENST00000453847 NIT1Q86X76 327 aa2.29□□□□□ -2.04
HMGN3P1-201ENST00000453847 BAP18Q8IXM2 172 aa2.29□□□□□ -2.04
HMGN3P1-201ENST00000453847 DEFB125Q8N687 156 aa2.29□□□□□ -2.04
HMGN3P1-201ENST00000453847 CLDN22Q8N7P3 220 aa2.29□□□□□ -2.04
HMGN3P1-201ENST00000453847 TBX5Q99593 518 aa2.29□□□□□ -2.04
HMGN3P1-201ENST00000453847 C1QTNF6Q9BXI9 259 aa2.29□□□□□ -2.04
HMGN3P1-201ENST00000453847 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.29□□□□□ -2.04
HMGN3P1-201ENST00000453847 IL20Q9NYY1 176 aa2.29□□□□□ -2.04
HMGN3P1-201ENST00000453847 ANAPC10Q9UM13 185 aa2.29□□□□□ -2.04
HMGN3P1-201ENST00000453847 OTOFQ9HC10 1997 aa2.29□□□□□ -2.04
HMGN3P1-201ENST00000453847 HECW2Q9P2P5 1572 aa2.28□□□□□ -2.04
HMGN3P1-201ENST00000453847 VGLL3A8MV65 326 aa2.28□□□□□ -2.04
HMGN3P1-201ENST00000453847 KRTAP9-6A8MVA2 160 aa2.28□□□□□ -2.04
HMGN3P1-201ENST00000453847 INMT-MINDY4F8WBC2 141 aa2.28□□□□□ -2.04
HMGN3P1-201ENST00000453847 C15orf65H3BRN8 121 aa2.28□□□□□ -2.04
HMGN3P1-201ENST00000453847 EEF1E1O43324 174 aaKnown RBP2.28□□□□□ -2.04
HMGN3P1-201ENST00000453847 DENRO43583 198 aaKnown RBP2.28□□□□□ -2.04
HMGN3P1-201ENST00000453847 SLC25A20O43772 301 aa2.28□□□□□ -2.04
HMGN3P1-201ENST00000453847 STK16O75716 305 aa2.28□□□□□ -2.04
HMGN3P1-201ENST00000453847 ZNF14P17017 642 aaPredicted RBP2.28□□□□□ -2.04
HMGN3P1-201ENST00000453847 CRABP2P29373 138 aa2.28□□□□□ -2.04
HMGN3P1-201ENST00000453847 PPP1R2P41236 205 aa2.28□□□□□ -2.04
HMGN3P1-201ENST00000453847 SULT1A1P50225 295 aa2.28□□□□□ -2.04
HMGN3P1-201ENST00000453847 RAP1GDS1P52306 607 aa2.28□□□□□ -2.04
HMGN3P1-201ENST00000453847 TMEM33P57088 247 aa2.28□□□□□ -2.04
HMGN3P1-201ENST00000453847 MRPL51Q4U2R6 128 aaKnown RBP2.28□□□□□ -2.04
HMGN3P1-201ENST00000453847 PPP1R2P3Q6NXS1 205 aa2.28□□□□□ -2.04
HMGN3P1-201ENST00000453847 FAM173BQ6P4H8 233 aa2.28□□□□□ -2.04
HMGN3P1-201ENST00000453847 LYPD6Q86Y78 171 aa2.28□□□□□ -2.04
HMGN3P1-201ENST00000453847 ZNF664Q8N3J9 261 aa2.28□□□□□ -2.04
HMGN3P1-201ENST00000453847 LY6G5BQ8NDX9 201 aa2.28□□□□□ -2.04
HMGN3P1-201ENST00000453847 OR1L8Q8NGR8 309 aa2.28□□□□□ -2.04
HMGN3P1-201ENST00000453847 JOSD2Q8TAC2 188 aa2.28□□□□□ -2.04
HMGN3P1-201ENST00000453847 OR5P3Q8WZ94 311 aa2.28□□□□□ -2.04
HMGN3P1-201ENST00000453847 HIST1H2BAQ96A08 127 aa2.28□□□□□ -2.04
HMGN3P1-201ENST00000453847 OTUB2Q96DC9 234 aa2.28□□□□□ -2.04
HMGN3P1-201ENST00000453847 DGCR14Q96DF8 476 aaKnown RBP2.28□□□□□ -2.04
HMGN3P1-201ENST00000453847 IMP4Q96G21 291 aaKnown RBP2.28□□□□□ -2.04
HMGN3P1-201ENST00000453847 SLC25A44Q96H78 314 aaPredicted RBP2.28□□□□□ -2.04
HMGN3P1-201ENST00000453847 DIRAS2Q96HU8 199 aa2.28□□□□□ -2.04
HMGN3P1-201ENST00000453847 PECRQ9BY49 303 aa2.28□□□□□ -2.04
HMGN3P1-201ENST00000453847 TLNRD1Q9H1K6 362 aa2.28□□□□□ -2.04
HMGN3P1-201ENST00000453847 WASHC3Q9Y3C0 194 aa2.28□□□□□ -2.04
HMGN3P1-201ENST00000453847 R4GN34 69 aa2.28□□□□□ -2.04
HMGN3P1-201ENST00000453847 ATG2BQ96BY7 2078 aa2.27□□□□□ -2.05
HMGN3P1-201ENST00000453847 DSCAMO60469 2012 aa2.27□□□□□ -2.05
HMGN3P1-201ENST00000453847 CCDC144AA2RUR9 1427 aa2.27□□□□□ -2.05
HMGN3P1-201ENST00000453847 LCTP09848 1927 aa2.27□□□□□ -2.05
HMGN3P1-201ENST00000453847 A0A1B0GU33 70 aa2.27□□□□□ -2.05
HMGN3P1-201ENST00000453847 GGTLC3B5MD39 225 aa2.27□□□□□ -2.05
HMGN3P1-201ENST00000453847 MT-CO2P00403 227 aa2.27□□□□□ -2.05
HMGN3P1-201ENST00000453847 CD7P09564 240 aa2.27□□□□□ -2.05
HMGN3P1-201ENST00000453847 CRYBB3P26998 211 aa2.27□□□□□ -2.05
HMGN3P1-201ENST00000453847 PPP1CCP36873 323 aaKnown RBP2.27□□□□□ -2.05
HMGN3P1-201ENST00000453847 CA7P43166 264 aa2.27□□□□□ -2.05
HMGN3P1-201ENST00000453847 OMPP47874 163 aa2.27□□□□□ -2.05
HMGN3P1-201ENST00000453847 CDK9P50750 372 aaKnown RBP2.27□□□□□ -2.05
HMGN3P1-201ENST00000453847 SPCS3P61009 180 aa2.27□□□□□ -2.05
HMGN3P1-201ENST00000453847 BASP1P80723 227 aaKnown RBP2.27□□□□□ -2.05
HMGN3P1-201ENST00000453847 TNFAIP6P98066 277 aaPredicted RBP2.27□□□□□ -2.05
HMGN3P1-201ENST00000453847 RUNX1Q01196 453 aa2.27□□□□□ -2.05
HMGN3P1-201ENST00000453847 IL15RAQ13261 267 aa2.27□□□□□ -2.05
HMGN3P1-201ENST00000453847 FAM201AQ5SY85 155 aa2.27□□□□□ -2.05
HMGN3P1-201ENST00000453847 FAM78BQ5VT40 261 aa2.27□□□□□ -2.05
HMGN3P1-201ENST00000453847 SPOPLQ6IQ16 392 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms