RNA–Protein interactions for RNA: ENST00000453551.6

PUF60-203, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 1 (best) BASIC

Gene PUF60, Length 1,842 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-203ENST00000453551 LRRC29Q8WV35 223 aa17.71■□□□□ 0.43
PUF60-203ENST00000453551 TCTEX1D2Q8WW35 142 aa17.71■□□□□ 0.43
PUF60-203ENST00000453551 RCC1LQ96I51 464 aaKnown RBP17.71■□□□□ 0.43
PUF60-203ENST00000453551 OPN3Q9H1Y3 402 aaPredicted RBP17.71■□□□□ 0.43
PUF60-203ENST00000453551 MSL2Q9HCI7 577 aa17.71■□□□□ 0.43
PUF60-203ENST00000453551 C17orf98A8MV24 154 aa17.7■□□□□ 0.42
PUF60-203ENST00000453551 SRRM5B3KS81 715 aa17.7■□□□□ 0.42
PUF60-203ENST00000453551 S1PR2O95136 353 aa17.7■□□□□ 0.42
PUF60-203ENST00000453551 CLDN1O95832 211 aa17.7■□□□□ 0.42
PUF60-203ENST00000453551 ARG1P05089 322 aa17.7■□□□□ 0.42
PUF60-203ENST00000453551 GLIPR1P48060 266 aa17.7■□□□□ 0.42
PUF60-203ENST00000453551 DEFB109BQ30KR1 87 aa17.7■□□□□ 0.42
PUF60-203ENST00000453551 AARDQ4LEZ3 155 aa17.7■□□□□ 0.42
PUF60-203ENST00000453551 HEPN1Q6WQI6 88 aa17.7■□□□□ 0.42
PUF60-203ENST00000453551 SEM1Q6ZVN7 128 aa17.7■□□□□ 0.42
PUF60-203ENST00000453551 CD177Q8N6Q3 437 aa17.7■□□□□ 0.42
PUF60-203ENST00000453551 NIPSNAP3BQ9BS92 247 aa17.7■□□□□ 0.42
PUF60-203ENST00000453551 TMEM147Q9BVK8 224 aa17.7■□□□□ 0.42
PUF60-203ENST00000453551 UFSP2Q9NUQ7 469 aa17.7■□□□□ 0.42
PUF60-203ENST00000453551 METRNQ9UJH8 293 aa17.7■□□□□ 0.42
PUF60-203ENST00000453551 PMS2P5A8MQ11 134 aa17.7■□□□□ 0.42
PUF60-203ENST00000453551 PRDX2P32119 198 aa17.7■□□□□ 0.42
PUF60-203ENST00000453551 G6PCP35575 357 aa17.7■□□□□ 0.42
PUF60-203ENST00000453551 ZADH2Q8N4Q0 377 aa17.7■□□□□ 0.42
PUF60-203ENST00000453551 ZNF808Q8N4W9 903 aaPredicted RBP17.7■□□□□ 0.42
PUF60-203ENST00000453551 EDARADDQ8WWZ3 215 aa17.7■□□□□ 0.42
PUF60-203ENST00000453551 NCOR1P1Q9H4R4 102 aa17.7■□□□□ 0.42
PUF60-203ENST00000453551 METTL1Q9UBP6 276 aaKnown RBP17.7■□□□□ 0.42
PUF60-203ENST00000453551 WASF3Q9UPY6 502 aa17.7■□□□□ 0.42
PUF60-203ENST00000453551 FAM186AA6NE01 2351 aa17.7■□□□□ 0.42
PUF60-203ENST00000453551 FAM90A9PA6NNJ1 464 aa17.69■□□□□ 0.42
PUF60-203ENST00000453551 TAGLN2P37802 199 aaKnown RBP17.69■□□□□ 0.42
PUF60-203ENST00000453551 PNRC1Q12796 327 aaPredicted RBP17.69■□□□□ 0.42
PUF60-203ENST00000453551 VWC2Q2TAL6 325 aa17.69■□□□□ 0.42
PUF60-203ENST00000453551 MRGPRGQ86SM5 289 aa17.69■□□□□ 0.42
PUF60-203ENST00000453551 PPP1R35Q8TAP8 253 aa17.69■□□□□ 0.42
PUF60-203ENST00000453551 VSIRQ9H7M9 311 aa17.69■□□□□ 0.42
PUF60-203ENST00000453551 JPT1Q9UK76 154 aa17.69■□□□□ 0.42
PUF60-203ENST00000453551 COL6A3P12111 3177 aa17.69■□□□□ 0.42
PUF60-203ENST00000453551 hCG_1809904A0A1W2PP81 198 aa17.68■□□□□ 0.42
PUF60-203ENST00000453551 A0A1W2PR64 198 aa17.68■□□□□ 0.42
PUF60-203ENST00000453551 A0A1W2PRV1 198 aa17.68■□□□□ 0.42
PUF60-203ENST00000453551 KRASP01116 189 aa17.68■□□□□ 0.42
PUF60-203ENST00000453551 IFNA1P01562 189 aa17.68■□□□□ 0.42
PUF60-203ENST00000453551 IGHV2-5P01817 119 aa17.68■□□□□ 0.42
PUF60-203ENST00000453551 S100A8P05109 93 aa17.68■□□□□ 0.42
PUF60-203ENST00000453551 GZMHP20718 246 aa17.68■□□□□ 0.42
PUF60-203ENST00000453551 DLK1P80370 383 aa17.68■□□□□ 0.42
PUF60-203ENST00000453551 ZNF816Q0VGE8 651 aaPredicted RBP17.68■□□□□ 0.42
PUF60-203ENST00000453551 FAM90A2PQ658T7 463 aa17.68■□□□□ 0.42
PUF60-203ENST00000453551 IQCF2Q8IXL9 164 aa17.68■□□□□ 0.42
PUF60-203ENST00000453551 SNX22Q96L94 193 aa17.68■□□□□ 0.42
PUF60-203ENST00000453551 AGMATQ9BSE5 352 aa17.68■□□□□ 0.42
PUF60-203ENST00000453551 GNG13Q9P2W3 67 aa17.68■□□□□ 0.42
PUF60-203ENST00000453551 FZR1Q9UM11 496 aa17.68■□□□□ 0.42
PUF60-203ENST00000453551 IFNA17P01571 189 aa17.68■□□□□ 0.42
PUF60-203ENST00000453551 SSTR5P35346 364 aa17.68■□□□□ 0.42
PUF60-203ENST00000453551 MEOX2P50222 304 aa17.68■□□□□ 0.42
PUF60-203ENST00000453551 SNRPEP62304 92 aaKnown RBP17.68■□□□□ 0.42
PUF60-203ENST00000453551 TIMM23BQ5SRD1 257 aa17.68■□□□□ 0.42
PUF60-203ENST00000453551 CA5BP1Q8WTZ4 195 aa17.68■□□□□ 0.42
PUF60-203ENST00000453551 VAX2Q9UIW0 290 aa17.68■□□□□ 0.42
PUF60-203ENST00000453551 UBE2L5PA0A1B0GUS4 154 aa17.67■□□□□ 0.42
PUF60-203ENST00000453551 IGHV3-13P01766 116 aa17.67■□□□□ 0.42
PUF60-203ENST00000453551 MBP02144 154 aa17.67■□□□□ 0.42
PUF60-203ENST00000453551 S100A6P06703 90 aa17.67■□□□□ 0.42
PUF60-203ENST00000453551 H2BFWTQ7Z2G1 175 aa17.67■□□□□ 0.42
PUF60-203ENST00000453551 C12orf57Q99622 126 aa17.67■□□□□ 0.42
PUF60-203ENST00000453551 ZNF665Q9H7R5 613 aa17.67■□□□□ 0.42
PUF60-203ENST00000453551 MAP1LC3B2A6NCE7 125 aa17.66■□□□□ 0.42
PUF60-203ENST00000453551 MGST3O14880 152 aa17.66■□□□□ 0.42
PUF60-203ENST00000453551 EGR1P18146 543 aa17.66■□□□□ 0.42
PUF60-203ENST00000453551 FAM53AQ6NSI3 398 aaPredicted RBP17.66■□□□□ 0.42
PUF60-203ENST00000453551 SSX7Q7RTT5 188 aa17.66■□□□□ 0.42
PUF60-203ENST00000453551 DTD1Q8TEA8 209 aa17.66■□□□□ 0.42
PUF60-203ENST00000453551 MAP1LC3BQ9GZQ8 125 aa17.66■□□□□ 0.42
PUF60-203ENST00000453551 BDP1A6H8Y1 2624 aa17.66■□□□□ 0.42
PUF60-203ENST00000453551 ITGB1BP1O14713 200 aa17.65■□□□□ 0.42
PUF60-203ENST00000453551 YPEL1O60688 119 aa17.65■□□□□ 0.42
PUF60-203ENST00000453551 FBP1P09467 338 aa17.65■□□□□ 0.42
PUF60-203ENST00000453551 GNB2P62879 340 aa17.65■□□□□ 0.42
PUF60-203ENST00000453551 LCN15Q6UWW0 184 aa17.65■□□□□ 0.42
PUF60-203ENST00000453551 YPEL2Q96QA6 119 aa17.65■□□□□ 0.42
PUF60-203ENST00000453551 TMEM242Q9NWH2 141 aa17.65■□□□□ 0.42
PUF60-203ENST00000453551 IGKV1D-17A0A075B6S4 117 aa17.65■□□□□ 0.42
PUF60-203ENST00000453551 LINC00473A8K010 186 aa17.65■□□□□ 0.42
PUF60-203ENST00000453551 F2RL2O00254 374 aa17.65■□□□□ 0.42
PUF60-203ENST00000453551 RBFOX2O43251 390 aaKnown RBP eCLIP17.65■□□□□ 0.42
PUF60-203ENST00000453551 TFF1P04155 84 aa17.65■□□□□ 0.42
PUF60-203ENST00000453551 MDKP21741 143 aaPredicted RBP17.65■□□□□ 0.42
PUF60-203ENST00000453551 GLRXP35754 106 aa17.65■□□□□ 0.42
PUF60-203ENST00000453551 Q3ZCU0 254 aa17.65■□□□□ 0.42
PUF60-203ENST00000453551 OR2B11Q5JQS5 317 aa17.65■□□□□ 0.42
PUF60-203ENST00000453551 OR2Z1Q8NG97 314 aa17.65■□□□□ 0.42
PUF60-203ENST00000453551 PSG11Q9UQ72 335 aa17.65■□□□□ 0.42
PUF60-203ENST00000453551 GAB2Q9UQC2 676 aa17.65■□□□□ 0.42
PUF60-203ENST00000453551 FREM2Q5SZK8 3169 aa17.64■□□□□ 0.41
PUF60-203ENST00000453551 EIF3GO75821 320 aaKnown RBP eCLIP17.64■□□□□ 0.41
PUF60-203ENST00000453551 NKX6-1P78426 367 aaPredicted RBP17.64■□□□□ 0.41
PUF60-203ENST00000453551 HOXA4Q00056 320 aaPredicted RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms