RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 AKR1E2Q96JD6 320 aa7.02□□□□□ -1.29
COL28A1-205ENST00000453441 SSX3Q99909 188 aa7.02□□□□□ -1.29
COL28A1-205ENST00000453441 SOSTQ9BQB4 213 aa7.02□□□□□ -1.29
COL28A1-205ENST00000453441 AGMATQ9BSE5 352 aa7.02□□□□□ -1.29
COL28A1-205ENST00000453441 C11orf54Q9H0W9 315 aaPredicted RBP7.02□□□□□ -1.29
COL28A1-205ENST00000453441 OR1A1Q9P1Q5 309 aa7.02□□□□□ -1.29
COL28A1-205ENST00000453441 MTFP1Q9UDX5 166 aa7.02□□□□□ -1.29
COL28A1-205ENST00000453441 TCF19Q9Y242 345 aa7.02□□□□□ -1.29
COL28A1-205ENST00000453441 OR2W1Q9Y3N9 320 aa7.02□□□□□ -1.29
COL28A1-205ENST00000453441 HILPDAQ9Y5L2 63 aa7.02□□□□□ -1.29
COL28A1-205ENST00000453441 IGKV1D-8A0A087WSZ0 117 aa7.01□□□□□ -1.29
COL28A1-205ENST00000453441 IGHV1-3A0A0C4DH29 117 aa7.01□□□□□ -1.29
COL28A1-205ENST00000453441 MDFIC2A0A1B0GVS7 189 aa7.01□□□□□ -1.29
COL28A1-205ENST00000453441 A0A1W2PPI3 338 aa7.01□□□□□ -1.29
COL28A1-205ENST00000453441 FAM90A9PA6NNJ1 464 aa7.01□□□□□ -1.29
COL28A1-205ENST00000453441 M0QZK8 103 aa7.01□□□□□ -1.29
COL28A1-205ENST00000453441 SLC31A2O15432 143 aa7.01□□□□□ -1.29
COL28A1-205ENST00000453441 TUSC2O75896 110 aa7.01□□□□□ -1.29
COL28A1-205ENST00000453441 VENTXO95231 258 aa7.01□□□□□ -1.29
COL28A1-205ENST00000453441 IGHV3-7P01780 117 aa7.01□□□□□ -1.29
COL28A1-205ENST00000453441 IGHV4-59P01825 116 aa7.01□□□□□ -1.29
COL28A1-205ENST00000453441 CRYBA1P05813 215 aa7.01□□□□□ -1.29
COL28A1-205ENST00000453441 CSF1P09603 554 aa7.01□□□□□ -1.29
COL28A1-205ENST00000453441 OR5H8P0DN80 308 aa7.01□□□□□ -1.29
COL28A1-205ENST00000453441 CD1BP29016 333 aa7.01□□□□□ -1.29
COL28A1-205ENST00000453441 MC5RP33032 325 aa7.01□□□□□ -1.29
COL28A1-205ENST00000453441 GPR12P47775 334 aa7.01□□□□□ -1.29
COL28A1-205ENST00000453441 LUMP51884 338 aaPredicted RBP7.01□□□□□ -1.29
COL28A1-205ENST00000453441 TAS2R19P59542 299 aa7.01□□□□□ -1.29
COL28A1-205ENST00000453441 DYRK1AQ13627 763 aa7.01□□□□□ -1.29
COL28A1-205ENST00000453441 VAX1Q5SQQ9 334 aa7.01□□□□□ -1.29
COL28A1-205ENST00000453441 LDLRAD2Q5SZI1 272 aa7.01□□□□□ -1.29
COL28A1-205ENST00000453441 C16orf87Q6PH81 154 aa7.01□□□□□ -1.29
COL28A1-205ENST00000453441 FAM131AQ6UXB0 335 aa7.01□□□□□ -1.29
COL28A1-205ENST00000453441 OVCH2Q7RTZ1 564 aa7.01□□□□□ -1.29
COL28A1-205ENST00000453441 CCDC190Q86UF4 302 aa7.01□□□□□ -1.29
COL28A1-205ENST00000453441 TMEM17Q86X19 198 aa7.01□□□□□ -1.29
COL28A1-205ENST00000453441 PRIMA1Q86XR5 153 aa7.01□□□□□ -1.29
COL28A1-205ENST00000453441 GVQW1Q8N7I0 195 aa7.01□□□□□ -1.29
COL28A1-205ENST00000453441 ZBTB34Q8NCN2 500 aa7.01□□□□□ -1.29
COL28A1-205ENST00000453441 OR8H1Q8NGG4 311 aa7.01□□□□□ -1.29
COL28A1-205ENST00000453441 OR6Q1Q8NGQ2 317 aa7.01□□□□□ -1.29
COL28A1-205ENST00000453441 CAPSLQ8WWF8 208 aa7.01□□□□□ -1.29
COL28A1-205ENST00000453441 GIMAP1Q8WWP7 306 aa7.01□□□□□ -1.29
COL28A1-205ENST00000453441 TMEM158Q8WZ71 300 aa7.01□□□□□ -1.29
COL28A1-205ENST00000453441 SNAPC3Q92966 411 aa7.01□□□□□ -1.29
COL28A1-205ENST00000453441 ADTRPQ96IZ2 230 aa7.01□□□□□ -1.29
COL28A1-205ENST00000453441 ABHD1Q96SE0 405 aa7.01□□□□□ -1.29
COL28A1-205ENST00000453441 RANBP3Q9H6Z4 567 aaPredicted RBP7.01□□□□□ -1.29
COL28A1-205ENST00000453441 RBMX2Q9Y388 322 aaKnown RBP7.01□□□□□ -1.29
COL28A1-205ENST00000453441 RBM7Q9Y580 266 aaKnown RBP7.01□□□□□ -1.29
COL28A1-205ENST00000453441 SAA2-SAA4A0A096LPE2 208 aa7□□□□□ -1.29
COL28A1-205ENST00000453441 A0A1W2PPE3 182 aa7□□□□□ -1.29
COL28A1-205ENST00000453441 OR5H14A6NHG9 310 aa7□□□□□ -1.29
COL28A1-205ENST00000453441 ZNF736B4DX44 427 aaPredicted RBP7□□□□□ -1.29
COL28A1-205ENST00000453441 TIMM23O14925 209 aa7□□□□□ -1.29
COL28A1-205ENST00000453441 SAA2P0DJI9 122 aaPredicted RBP7□□□□□ -1.29
COL28A1-205ENST00000453441 PTHLHP12272 177 aa7□□□□□ -1.29
COL28A1-205ENST00000453441 FCGR2CP31995 323 aa7□□□□□ -1.29
COL28A1-205ENST00000453441 RAB13P51153 203 aa7□□□□□ -1.29
COL28A1-205ENST00000453441 AP3S2P59780 193 aa7□□□□□ -1.29
COL28A1-205ENST00000453441 HERV-K104P61576 105 aa7□□□□□ -1.29
COL28A1-205ENST00000453441 ZNF45Q02386 682 aa7□□□□□ -1.29
COL28A1-205ENST00000453441 EBI3Q14213 229 aa7□□□□□ -1.29
COL28A1-205ENST00000453441 MEF2DQ14814 521 aa7□□□□□ -1.29
COL28A1-205ENST00000453441 RNASE10Q5GAN6 216 aaKnown RBP7□□□□□ -1.29
COL28A1-205ENST00000453441 UTF1Q5T230 341 aa7□□□□□ -1.29
COL28A1-205ENST00000453441 DHRS7BQ6IAN0 325 aaPredicted RBP7□□□□□ -1.29
COL28A1-205ENST00000453441 DHRS11Q6UWP2 260 aa7□□□□□ -1.29
COL28A1-205ENST00000453441 MOB3BQ86TA1 216 aa7□□□□□ -1.29
COL28A1-205ENST00000453441 ODF3L1Q8IXM7 274 aa7□□□□□ -1.29
COL28A1-205ENST00000453441 DYNAPQ8N1N2 210 aa7□□□□□ -1.29
COL28A1-205ENST00000453441 ARRDC1Q8N5I2 433 aa7□□□□□ -1.29
COL28A1-205ENST00000453441 ZNF645Q8N7E2 425 aa7□□□□□ -1.29
COL28A1-205ENST00000453441 TMEM229BQ8NBD8 167 aa7□□□□□ -1.29
COL28A1-205ENST00000453441 OR2T10Q8NGZ9 312 aa7□□□□□ -1.29
COL28A1-205ENST00000453441 OR52I2Q8NH67 350 aa7□□□□□ -1.29
COL28A1-205ENST00000453441 C17orf50Q8WW18 174 aa7□□□□□ -1.29
COL28A1-205ENST00000453441 CFHR4Q92496 578 aa7□□□□□ -1.29
COL28A1-205ENST00000453441 EAF1Q96JC9 268 aaPredicted RBP7□□□□□ -1.29
COL28A1-205ENST00000453441 CHIAQ9BZP6 476 aa7□□□□□ -1.29
COL28A1-205ENST00000453441 ESM1Q9NQ30 184 aa7□□□□□ -1.29
COL28A1-205ENST00000453441 EHFQ9NZC4 300 aa7□□□□□ -1.29
COL28A1-205ENST00000453441 PTTG2Q9NZH5 202 aa7□□□□□ -1.29
COL28A1-205ENST00000453441 SOX21Q9Y651 276 aaPredicted RBP7□□□□□ -1.29
COL28A1-205ENST00000453441 A0A1B0GUS0 222 aa6.99□□□□□ -1.29
COL28A1-205ENST00000453441 MEIS3P1A6NDR6 274 aa6.99□□□□□ -1.29
COL28A1-205ENST00000453441 A6NDX4 124 aa6.99□□□□□ -1.29
COL28A1-205ENST00000453441 GPR137BO60478 399 aa6.99□□□□□ -1.29
COL28A1-205ENST00000453441 OR2F2O95006 317 aa6.99□□□□□ -1.29
COL28A1-205ENST00000453441 NDUFA7O95182 113 aa6.99□□□□□ -1.29
COL28A1-205ENST00000453441 PPYP01298 95 aa6.99□□□□□ -1.29
COL28A1-205ENST00000453441 APOA2P02652 100 aa6.99□□□□□ -1.29
COL28A1-205ENST00000453441 CD74P04233 296 aa6.99□□□□□ -1.29
COL28A1-205ENST00000453441 IFNA6P05013 189 aa6.99□□□□□ -1.29
COL28A1-205ENST00000453441 OR8U9P0C7N5 309 aa6.99□□□□□ -1.29
COL28A1-205ENST00000453441 RRASP10301 218 aa6.99□□□□□ -1.29
COL28A1-205ENST00000453441 S100GP29377 79 aa6.99□□□□□ -1.29
COL28A1-205ENST00000453441 HRH1P35367 487 aa6.99□□□□□ -1.29
COL28A1-205ENST00000453441 ECI1P42126 302 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms