RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 GSX1Q9H4S2 264 aaPredicted RBP11.86□□□□□ -0.51
SHANK2-210ENST00000449116 SDHAF2Q9NX18 166 aa11.86□□□□□ -0.51
SHANK2-210ENST00000449116 HIVEP1P15822 2718 aa11.85□□□□□ -0.51
SHANK2-210ENST00000449116 TEP1Q99973 2627 aaKnown RBP11.85□□□□□ -0.51
SHANK2-210ENST00000449116 GPR31O00270 319 aa11.85□□□□□ -0.51
SHANK2-210ENST00000449116 NDUFB6O95139 128 aa11.85□□□□□ -0.51
SHANK2-210ENST00000449116 DIAPH2-AS1Q14236 149 aa11.85□□□□□ -0.51
SHANK2-210ENST00000449116 PLA1AQ53H76 456 aa11.85□□□□□ -0.51
SHANK2-210ENST00000449116 IL17RELQ6ZVW7 336 aa11.85□□□□□ -0.51
SHANK2-210ENST00000449116 CMTM1Q8IZ96 169 aa11.85□□□□□ -0.51
SHANK2-210ENST00000449116 DRAM1Q8N682 238 aa11.85□□□□□ -0.51
SHANK2-210ENST00000449116 BVESQ8NE79 360 aa11.85□□□□□ -0.51
SHANK2-210ENST00000449116 ENKURQ8TC29 256 aa11.85□□□□□ -0.51
SHANK2-210ENST00000449116 C5orf30Q96GV9 206 aa11.85□□□□□ -0.51
SHANK2-210ENST00000449116 MS4A7Q9GZW8 240 aaPredicted RBP11.85□□□□□ -0.51
SHANK2-210ENST00000449116 COPZ2Q9P299 210 aa11.85□□□□□ -0.51
SHANK2-210ENST00000449116 GPR132Q9UNW8 380 aa11.85□□□□□ -0.51
SHANK2-210ENST00000449116 OOSP1A8MZH6 123 aa11.84□□□□□ -0.51
SHANK2-210ENST00000449116 TXNL1O43396 289 aa11.84□□□□□ -0.51
SHANK2-210ENST00000449116 PROP1O75360 226 aa11.84□□□□□ -0.51
SHANK2-210ENST00000449116 GAPDHP04406 335 aaKnown RBP11.84□□□□□ -0.51
SHANK2-210ENST00000449116 CTSDP07339 412 aaPredicted RBP11.84□□□□□ -0.51
SHANK2-210ENST00000449116 SRP14P37108 136 aaKnown RBP11.84□□□□□ -0.51
SHANK2-210ENST00000449116 REG1BP48304 166 aa11.84□□□□□ -0.51
SHANK2-210ENST00000449116 ZNF816Q0VGE8 651 aaPredicted RBP11.84□□□□□ -0.51
SHANK2-210ENST00000449116 SSX2Q16385 188 aa11.84□□□□□ -0.51
SHANK2-210ENST00000449116 ABCA11PQ4W5N1 156 aa11.84□□□□□ -0.51
SHANK2-210ENST00000449116 C9orf139Q6ZV77 190 aa11.84□□□□□ -0.51
SHANK2-210ENST00000449116 NRARPQ7Z6K4 114 aa11.84□□□□□ -0.51
SHANK2-210ENST00000449116 TGIF2LXQ8IUE1 241 aa11.84□□□□□ -0.51
SHANK2-210ENST00000449116 ZDHHC22Q8N966 263 aa11.84□□□□□ -0.51
SHANK2-210ENST00000449116 ZFAND2BQ8WV99 257 aa11.84□□□□□ -0.51
SHANK2-210ENST00000449116 C17orf50Q8WW18 174 aa11.84□□□□□ -0.51
SHANK2-210ENST00000449116 RTN4IP1Q8WWV3 396 aaPredicted RBP11.84□□□□□ -0.51
SHANK2-210ENST00000449116 AJUBAQ96IF1 538 aa11.84□□□□□ -0.51
SHANK2-210ENST00000449116 C5orf66Q9H5L9 145 aa11.84□□□□□ -0.51
SHANK2-210ENST00000449116 C14orf166Q9Y224 244 aaKnown RBP11.84□□□□□ -0.51
SHANK2-210ENST00000449116 VSIG4Q9Y279 399 aa11.84□□□□□ -0.51
SHANK2-210ENST00000449116 HILPDAQ9Y5L2 63 aa11.84□□□□□ -0.51
SHANK2-210ENST00000449116 A0A0U1RQK1 487 aa11.83□□□□□ -0.52
SHANK2-210ENST00000449116 M0R1X1 148 aa11.83□□□□□ -0.52
SHANK2-210ENST00000449116 PTTG1O95997 202 aa11.83□□□□□ -0.52
SHANK2-210ENST00000449116 TCRBP04435 133 aa11.83□□□□□ -0.52
SHANK2-210ENST00000449116 S100GP29377 79 aa11.83□□□□□ -0.52
SHANK2-210ENST00000449116 PHLDA2Q53GA4 152 aa11.83□□□□□ -0.52
SHANK2-210ENST00000449116 CCDC144NLQ6NUI1 221 aa11.83□□□□□ -0.52
SHANK2-210ENST00000449116 Q71RC1 249 aaPredicted RBP11.83□□□□□ -0.52
SHANK2-210ENST00000449116 RTBDNQ9BSG5 229 aaPredicted RBP11.83□□□□□ -0.52
SHANK2-210ENST00000449116 OCEL1Q9H607 264 aa11.83□□□□□ -0.52
SHANK2-210ENST00000449116 SLC2A9Q9NRM0 540 aa11.83□□□□□ -0.52
SHANK2-210ENST00000449116 FAM96BQ9Y3D0 163 aa11.83□□□□□ -0.52
SHANK2-210ENST00000449116 F8P00451 2351 aa11.83□□□□□ -0.52
SHANK2-210ENST00000449116 IGHV1-3A0A0C4DH29 117 aa11.82□□□□□ -0.52
SHANK2-210ENST00000449116 TNFSF12O43508 249 aa11.82□□□□□ -0.52
SHANK2-210ENST00000449116 FBP1P09467 338 aa11.82□□□□□ -0.52
SHANK2-210ENST00000449116 CT45A6P0DMU7 189 aa11.82□□□□□ -0.52
SHANK2-210ENST00000449116 CT45A5P0DMU8 189 aa11.82□□□□□ -0.52
SHANK2-210ENST00000449116 CT45A7P0DMV0 189 aa11.82□□□□□ -0.52
SHANK2-210ENST00000449116 PI3P19957 117 aa11.82□□□□□ -0.52
SHANK2-210ENST00000449116 DUTP33316 252 aaKnown RBP11.82□□□□□ -0.52
SHANK2-210ENST00000449116 PIGPP57054 158 aa11.82□□□□□ -0.52
SHANK2-210ENST00000449116 RND3P61587 244 aa11.82□□□□□ -0.52
SHANK2-210ENST00000449116 EIF4EBP1Q13541 118 aaPredicted RBP11.82□□□□□ -0.52
SHANK2-210ENST00000449116 RGS21Q2M5E4 152 aa11.82□□□□□ -0.52
SHANK2-210ENST00000449116 ZNF66Q6ZN08 573 aa11.82□□□□□ -0.52
SHANK2-210ENST00000449116 BCL6BQ8N143 479 aaPredicted RBP11.82□□□□□ -0.52
SHANK2-210ENST00000449116 OR8H3Q8N146 312 aa11.82□□□□□ -0.52
SHANK2-210ENST00000449116 DYNAPQ8N1N2 210 aa11.82□□□□□ -0.52
SHANK2-210ENST00000449116 CCDC71LQ8N9Z2 235 aa11.82□□□□□ -0.52
SHANK2-210ENST00000449116 DUSP18Q8NEJ0 188 aa11.82□□□□□ -0.52
SHANK2-210ENST00000449116 ADTRPQ96IZ2 230 aa11.82□□□□□ -0.52
SHANK2-210ENST00000449116 HSD17B10Q99714 261 aaKnown RBP11.82□□□□□ -0.52
SHANK2-210ENST00000449116 BEX2Q9BXY8 128 aa11.82□□□□□ -0.52
SHANK2-210ENST00000449116 MRPL20Q9BYC9 149 aaKnown RBP11.82□□□□□ -0.52
SHANK2-210ENST00000449116 C20orf85Q9H1P6 137 aa11.82□□□□□ -0.52
SHANK2-210ENST00000449116 CDC42EP3Q9UKI2 254 aa11.82□□□□□ -0.52
SHANK2-210ENST00000449116 NUBP2Q9Y5Y2 271 aa11.82□□□□□ -0.52
SHANK2-210ENST00000449116 SOX21Q9Y651 276 aaPredicted RBP11.82□□□□□ -0.52
SHANK2-210ENST00000449116 HIVEP2P31629 2446 aa11.82□□□□□ -0.52
SHANK2-210ENST00000449116 A0A1W2PPI3 338 aa11.81□□□□□ -0.52
SHANK2-210ENST00000449116 ARPC1BO15143 372 aaKnown RBP11.81□□□□□ -0.52
SHANK2-210ENST00000449116 PGLYRP1O75594 196 aaPredicted RBP11.81□□□□□ -0.52
SHANK2-210ENST00000449116 RLN1P04808 185 aa11.81□□□□□ -0.52
SHANK2-210ENST00000449116 PAX6P26367 422 aa11.81□□□□□ -0.52
SHANK2-210ENST00000449116 THBS3P49746 956 aa11.81□□□□□ -0.52
SHANK2-210ENST00000449116 ARHGDIBP52566 201 aa11.81□□□□□ -0.52
SHANK2-210ENST00000449116 SCGB2A2Q13296 93 aa11.81□□□□□ -0.52
SHANK2-210ENST00000449116 KCTD9Q7L273 389 aa11.81□□□□□ -0.52
SHANK2-210ENST00000449116 TMED4Q7Z7H5 227 aa11.81□□□□□ -0.52
SHANK2-210ENST00000449116 DRAXINQ8NBI3 349 aaPredicted RBP11.81□□□□□ -0.52
SHANK2-210ENST00000449116 C22orf15Q8WYQ4 148 aa11.81□□□□□ -0.52
SHANK2-210ENST00000449116 GPHA2Q96T91 129 aa11.81□□□□□ -0.52
SHANK2-210ENST00000449116 NABP2Q9BQ15 211 aa11.81□□□□□ -0.52
SHANK2-210ENST00000449116 MEGF9Q9H1U4 602 aa11.81□□□□□ -0.52
SHANK2-210ENST00000449116 NUDT15Q9NV35 164 aa11.81□□□□□ -0.52
SHANK2-210ENST00000449116 FLVCR2Q9UPI3 526 aa11.81□□□□□ -0.52
SHANK2-210ENST00000449116 SONP18583 2426 aaKnown RBP11.81□□□□□ -0.52
SHANK2-210ENST00000449116 TRAV6A0A075B6T7 132 aa11.8□□□□□ -0.52
SHANK2-210ENST00000449116 LINC00473A8K010 186 aa11.8□□□□□ -0.52
SHANK2-210ENST00000449116 RNF212BA8MTL3 300 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms