RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 GPR31O00270 319 aa11.42□□□□□ -0.58
SHMT2-203ENST00000449049 HSD17B6O14756 317 aa11.42□□□□□ -0.58
SHMT2-203ENST00000449049 RAB29O14966 203 aa11.42□□□□□ -0.58
SHMT2-203ENST00000449049 ARG1P05089 322 aa11.42□□□□□ -0.58
SHMT2-203ENST00000449049 SAA2P0DJI9 122 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-203ENST00000449049 FOSL1P15407 271 aa11.42□□□□□ -0.58
SHMT2-203ENST00000449049 GPR12P47775 334 aa11.42□□□□□ -0.58
SHMT2-203ENST00000449049 PLET1Q6UQ28 207 aa11.42□□□□□ -0.58
SHMT2-203ENST00000449049 C1orf229Q6ZS94 237 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-203ENST00000449049 DRAM1Q8N682 238 aa11.42□□□□□ -0.58
SHMT2-203ENST00000449049 ZBTB34Q8NCN2 500 aa11.42□□□□□ -0.58
SHMT2-203ENST00000449049 FYTTD1Q96QD9 318 aaKnown RBP11.42□□□□□ -0.58
SHMT2-203ENST00000449049 ZNF251Q9BRH9 671 aa11.42□□□□□ -0.58
SHMT2-203ENST00000449049 RTBDNQ9BSG5 229 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-203ENST00000449049 SDHAF2Q9NX18 166 aa11.42□□□□□ -0.58
SHMT2-203ENST00000449049 FLVCR2Q9UPI3 526 aa11.42□□□□□ -0.58
SHMT2-203ENST00000449049 AMMECR1Q9Y4X0 333 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-203ENST00000449049 BUB1B-PAK6H3BSN5 160 aa11.41□□□□□ -0.58
SHMT2-203ENST00000449049 ARPC1BO15143 372 aaKnown RBP11.41□□□□□ -0.58
SHMT2-203ENST00000449049 MECP2P51608 486 aaKnown RBP11.41□□□□□ -0.58
SHMT2-203ENST00000449049 EIF4EBP1Q13541 118 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-203ENST00000449049 FAM71F2Q6NXP2 309 aa11.41□□□□□ -0.58
SHMT2-203ENST00000449049 ZNF833PQ6ZTB9 187 aa11.41□□□□□ -0.58
SHMT2-203ENST00000449049 PDZD9Q8IXQ8 264 aa11.41□□□□□ -0.58
SHMT2-203ENST00000449049 ST6GALNAC6Q969X2 333 aa11.41□□□□□ -0.58
SHMT2-203ENST00000449049 CREB3L1Q96BA8 519 aa11.41□□□□□ -0.58
SHMT2-203ENST00000449049 MARVELD1Q9BSK0 173 aa11.41□□□□□ -0.58
SHMT2-203ENST00000449049 C14orf166Q9Y224 244 aaKnown RBP11.41□□□□□ -0.58
SHMT2-203ENST00000449049 TRAV6A0A075B6T7 132 aa11.41□□□□□ -0.58
SHMT2-203ENST00000449049 TRAV40A0A0B4J280 105 aa11.41□□□□□ -0.58
SHMT2-203ENST00000449049 LY6LH3BQJ8 138 aa11.41□□□□□ -0.58
SHMT2-203ENST00000449049 PROP1O75360 226 aa11.41□□□□□ -0.58
SHMT2-203ENST00000449049 H2AFB2P0C5Z0 115 aa11.41□□□□□ -0.58
SHMT2-203ENST00000449049 PI3P19957 117 aa11.41□□□□□ -0.58
SHMT2-203ENST00000449049 IL3RAP26951 378 aa11.41□□□□□ -0.58
SHMT2-203ENST00000449049 RND3P61587 244 aa11.41□□□□□ -0.58
SHMT2-203ENST00000449049 TCTE3Q8IZS6 198 aa11.41□□□□□ -0.58
SHMT2-203ENST00000449049 TMUB1Q9BVT8 246 aa11.41□□□□□ -0.58
SHMT2-203ENST00000449049 SLC2A9Q9NRM0 540 aa11.41□□□□□ -0.58
SHMT2-203ENST00000449049 IGHV1-69DA0A0B4J2H0 117 aa11.4□□□□□ -0.58
SHMT2-203ENST00000449049 IGHV1-69P01742 117 aa11.4□□□□□ -0.58
SHMT2-203ENST00000449049 HTR2BP41595 481 aa11.4□□□□□ -0.58
SHMT2-203ENST00000449049 ABCA11PQ4W5N1 156 aa11.4□□□□□ -0.58
SHMT2-203ENST00000449049 MIDNQ504T8 468 aa11.4□□□□□ -0.58
SHMT2-203ENST00000449049 RPL39P5Q59GN2 51 aa11.4□□□□□ -0.58
SHMT2-203ENST00000449049 KLF17Q5JT82 389 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-203ENST00000449049 LDLRAD2Q5SZI1 272 aa11.4□□□□□ -0.58
SHMT2-203ENST00000449049 CMTM1Q8IZ96 169 aa11.4□□□□□ -0.58
SHMT2-203ENST00000449049 TMEM230Q96A57 120 aa11.4□□□□□ -0.58
SHMT2-203ENST00000449049 TBL2Q9Y4P3 447 aaKnown RBP11.4□□□□□ -0.58
SHMT2-203ENST00000449049 FSHBP01225 129 aa11.39□□□□□ -0.59
SHMT2-203ENST00000449049 RLN1P04808 185 aa11.39□□□□□ -0.59
SHMT2-203ENST00000449049 HTR1DP28221 377 aa11.39□□□□□ -0.59
SHMT2-203ENST00000449049 RAG2P55895 527 aa11.39□□□□□ -0.59
SHMT2-203ENST00000449049 PIGPP57054 158 aa11.39□□□□□ -0.59
SHMT2-203ENST00000449049 PHLDA2Q53GA4 152 aa11.39□□□□□ -0.59
SHMT2-203ENST00000449049 MINOS1Q5TGZ0 78 aa11.39□□□□□ -0.59
SHMT2-203ENST00000449049 GPR157Q5UAW9 335 aa11.39□□□□□ -0.59
SHMT2-203ENST00000449049 TMED4Q7Z7H5 227 aa11.39□□□□□ -0.59
SHMT2-203ENST00000449049 ADAD2Q8NCV1 583 aaKnown RBP11.39□□□□□ -0.59
SHMT2-203ENST00000449049 S1PR3Q99500 378 aa11.39□□□□□ -0.59
SHMT2-203ENST00000449049 MINOS1-NBL1R4GNA1 71 aa11.39□□□□□ -0.59
SHMT2-203ENST00000449049 A0A1W2PRD5 423 aa11.39□□□□□ -0.59
SHMT2-203ENST00000449049 A0A1W2PRF3 423 aa11.39□□□□□ -0.59
SHMT2-203ENST00000449049 A0A1W2PRM7 423 aa11.39□□□□□ -0.59
SHMT2-203ENST00000449049 NPFFO15130 113 aa11.39□□□□□ -0.59
SHMT2-203ENST00000449049 PEX14O75381 377 aa11.39□□□□□ -0.59
SHMT2-203ENST00000449049 IGHV4-38-2P0DP08 117 aa11.39□□□□□ -0.59
SHMT2-203ENST00000449049 SLC25A42Q86VD7 318 aa11.39□□□□□ -0.59
SHMT2-203ENST00000449049 CCDC71LQ8N9Z2 235 aa11.39□□□□□ -0.59
SHMT2-203ENST00000449049 ALX4Q9H161 411 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-203ENST00000449049 DPM3Q9P2X0 92 aa11.39□□□□□ -0.59
SHMT2-203ENST00000449049 LEUTXA8MZ59 168 aa11.38□□□□□ -0.59
SHMT2-203ENST00000449049 INMT-MINDY4F8WBC2 141 aa11.38□□□□□ -0.59
SHMT2-203ENST00000449049 PGLYRP1O75594 196 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-203ENST00000449049 ANXA7P20073 488 aaKnown RBP11.38□□□□□ -0.59
SHMT2-203ENST00000449049 TAS2R31P59538 309 aa11.38□□□□□ -0.59
SHMT2-203ENST00000449049 UBE2MP61081 183 aaKnown RBP11.38□□□□□ -0.59
SHMT2-203ENST00000449049 B2MP61769 119 aa11.38□□□□□ -0.59
SHMT2-203ENST00000449049 CD83Q01151 205 aa11.38□□□□□ -0.59
SHMT2-203ENST00000449049 DHODHQ02127 395 aa11.38□□□□□ -0.59
SHMT2-203ENST00000449049 ZNF816Q0VGE8 651 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-203ENST00000449049 DIAPH2-AS1Q14236 149 aa11.38□□□□□ -0.59
SHMT2-203ENST00000449049 ZNF66Q6ZN08 573 aa11.38□□□□□ -0.59
SHMT2-203ENST00000449049 LHFPL4Q7Z7J7 247 aa11.38□□□□□ -0.59
SHMT2-203ENST00000449049 CCDC28AQ8IWP9 274 aa11.38□□□□□ -0.59
SHMT2-203ENST00000449049 PIP4P2Q8N4L2 257 aa11.38□□□□□ -0.59
SHMT2-203ENST00000449049 RTN4IP1Q8WWV3 396 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-203ENST00000449049 AJUBAQ96IF1 538 aa11.38□□□□□ -0.59
SHMT2-203ENST00000449049 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.38□□□□□ -0.592e-7■■■■□ 26
SHMT2-203ENST00000449049 ITPR3Q14573 2671 aa11.38□□□□□ -0.59
SHMT2-203ENST00000449049 A0A0B4J293 547 aa11.38□□□□□ -0.59
SHMT2-203ENST00000449049 CRYM-AS1A6NIL9 109 aa11.38□□□□□ -0.59
SHMT2-203ENST00000449049 M0R1X1 148 aa11.38□□□□□ -0.59
SHMT2-203ENST00000449049 TNFSF12O43508 249 aa11.38□□□□□ -0.59
SHMT2-203ENST00000449049 VSIG10L2P0DP72 767 aa11.38□□□□□ -0.59
SHMT2-203ENST00000449049 CD99P14209 185 aa11.38□□□□□ -0.59
SHMT2-203ENST00000449049 S100GP29377 79 aa11.38□□□□□ -0.59
SHMT2-203ENST00000449049 DUTP33316 252 aaKnown RBP11.38□□□□□ -0.59
SHMT2-203ENST00000449049 SAA4P35542 130 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms