RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 GSTP1P09211 210 aaKnown RBP10.01□□□□□ -0.81
PRPF40A-203ENST00000448428 OR8U9P0C7N5 309 aa10.01□□□□□ -0.81
PRPF40A-203ENST00000448428 PF4V1P10720 104 aa10.01□□□□□ -0.81
PRPF40A-203ENST00000448428 DTYMKP23919 212 aa10.01□□□□□ -0.81
PRPF40A-203ENST00000448428 SCAND1P57086 179 aa10.01□□□□□ -0.81
PRPF40A-203ENST00000448428 RPL23AP62750 156 aaKnown RBP10.01□□□□□ -0.81
PRPF40A-203ENST00000448428 PNLIPRP3Q17RR3 467 aa10.01□□□□□ -0.81
PRPF40A-203ENST00000448428 C5orf64Q2M2E5 130 aa10.01□□□□□ -0.81
PRPF40A-203ENST00000448428 TIMM50Q3ZCQ8 353 aa10.01□□□□□ -0.81
PRPF40A-203ENST00000448428 ZNF260Q3ZCT1 412 aa10.01□□□□□ -0.81
PRPF40A-203ENST00000448428 SAMD5Q5TGI4 173 aa10.01□□□□□ -0.81
PRPF40A-203ENST00000448428 LIN54Q6MZP7 749 aa10.01□□□□□ -0.81
PRPF40A-203ENST00000448428 TEX38Q6PEX7 206 aa10.01□□□□□ -0.81
PRPF40A-203ENST00000448428 C18orf65Q6ZTR6 163 aa10.01□□□□□ -0.81
PRPF40A-203ENST00000448428 COMMD1Q8N668 190 aa10.01□□□□□ -0.81
PRPF40A-203ENST00000448428 ZNF383Q8NA42 475 aa10.01□□□□□ -0.81
PRPF40A-203ENST00000448428 WFDC9Q8NEX5 89 aa10.01□□□□□ -0.81
PRPF40A-203ENST00000448428 OR8U1Q8NH10 309 aa10.01□□□□□ -0.81
PRPF40A-203ENST00000448428 ST6GALNAC5Q9BVH7 336 aa10.01□□□□□ -0.81
PRPF40A-203ENST00000448428 GON7Q9BXV9 100 aa10.01□□□□□ -0.81
PRPF40A-203ENST00000448428 VCX3AQ9NNX9 186 aa10.01□□□□□ -0.81
PRPF40A-203ENST00000448428 ZFP57Q9NU63 452 aa10.01□□□□□ -0.81
PRPF40A-203ENST00000448428 RHBDL2Q9NX52 303 aa10.01□□□□□ -0.81
PRPF40A-203ENST00000448428 GAB2Q9UQC2 676 aa10.01□□□□□ -0.81
PRPF40A-203ENST00000448428 WASHC3Q9Y3C0 194 aa10.01□□□□□ -0.81
PRPF40A-203ENST00000448428 ETV7Q9Y603 341 aa10.01□□□□□ -0.81
PRPF40A-203ENST00000448428 CMYA5Q8N3K9 4069 aa10.01□□□□□ -0.81
PRPF40A-203ENST00000448428 SSX5O60225 188 aa10□□□□□ -0.81
PRPF40A-203ENST00000448428 SCGNO76038 276 aa10□□□□□ -0.81
PRPF40A-203ENST00000448428 NDUFA3O95167 84 aa10□□□□□ -0.81
PRPF40A-203ENST00000448428 HLA-DRB1P01911 266 aa10□□□□□ -0.81
PRPF40A-203ENST00000448428 IGF1P05019 195 aa10□□□□□ -0.81
PRPF40A-203ENST00000448428 TFAP2AP05549 437 aa10□□□□□ -0.81
PRPF40A-203ENST00000448428 RPS19P39019 145 aaKnown RBP10□□□□□ -0.81
PRPF40A-203ENST00000448428 LSM3P62310 102 aaKnown RBP10□□□□□ -0.81
PRPF40A-203ENST00000448428 CFHR3Q02985 330 aa10□□□□□ -0.81
PRPF40A-203ENST00000448428 BEAN1Q3B7T3 259 aa10□□□□□ -0.81
PRPF40A-203ENST00000448428 PDLIM3Q53GG5 364 aaPredicted RBP10□□□□□ -0.81
PRPF40A-203ENST00000448428 OXLD1Q5BKU9 147 aa10□□□□□ -0.81
PRPF40A-203ENST00000448428 LCNL1Q6ZST4 164 aa10□□□□□ -0.81
PRPF40A-203ENST00000448428 H1FOOQ8IZA3 346 aaPredicted RBP10□□□□□ -0.81
PRPF40A-203ENST00000448428 NUDCD2Q8WVJ2 157 aa10□□□□□ -0.81
PRPF40A-203ENST00000448428 SLC25A38Q96DW6 304 aa10□□□□□ -0.81
PRPF40A-203ENST00000448428 DCSTAMPQ9H295 470 aa10□□□□□ -0.81
PRPF40A-203ENST00000448428 TRAV18A0A075B6X5 111 aa9.99□□□□□ -0.81
PRPF40A-203ENST00000448428 IGHV7-81A0A0B4J1V7 117 aa9.99□□□□□ -0.81
PRPF40A-203ENST00000448428 M0R1X1 148 aa9.99□□□□□ -0.81
PRPF40A-203ENST00000448428 FCN1O00602 326 aa9.99□□□□□ -0.81
PRPF40A-203ENST00000448428 RRHO14718 337 aa9.99□□□□□ -0.81
PRPF40A-203ENST00000448428 RRP9O43818 475 aaKnown RBP9.99□□□□□ -0.81
PRPF40A-203ENST00000448428 RBBP9O75884 186 aa9.99□□□□□ -0.81
PRPF40A-203ENST00000448428 PF4P02776 101 aa9.99□□□□□ -0.81
PRPF40A-203ENST00000448428 RPLP1P05386 114 aaKnown RBP9.99□□□□□ -0.81
PRPF40A-203ENST00000448428 CD33P20138 364 aa9.99□□□□□ -0.81
PRPF40A-203ENST00000448428 GNG2P59768 71 aa9.99□□□□□ -0.81
PRPF40A-203ENST00000448428 PITPNAQ00169 270 aa9.99□□□□□ -0.81
PRPF40A-203ENST00000448428 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.99□□□□□ -0.81
PRPF40A-203ENST00000448428 C5orf30Q96GV9 206 aa9.99□□□□□ -0.81
PRPF40A-203ENST00000448428 RNF5Q99942 180 aa9.99□□□□□ -0.81
PRPF40A-203ENST00000448428 GINS4Q9BRT9 223 aa9.99□□□□□ -0.81
PRPF40A-203ENST00000448428 OR2D2Q9H210 308 aa9.99□□□□□ -0.81
PRPF40A-203ENST00000448428 OR51J1Q9H342 316 aa9.99□□□□□ -0.81
PRPF40A-203ENST00000448428 FBXL15Q9H469 300 aa9.99□□□□□ -0.81
PRPF40A-203ENST00000448428 SDHAF2Q9NX18 166 aa9.99□□□□□ -0.81
PRPF40A-203ENST00000448428 KIAA1456Q9P272 454 aa9.99□□□□□ -0.81
PRPF40A-203ENST00000448428 ZNF580Q9UK33 172 aa9.99□□□□□ -0.81
PRPF40A-203ENST00000448428 WSB1Q9Y6I7 421 aa9.99□□□□□ -0.81
PRPF40A-203ENST00000448428 MEGF8Q7Z7M0 2845 aa9.98□□□□□ -0.81
PRPF40A-203ENST00000448428 G3V318 75 aa9.98□□□□□ -0.81
PRPF40A-203ENST00000448428 ATP6V0E1O15342 81 aa9.98□□□□□ -0.81
PRPF40A-203ENST00000448428 TMEM127O75204 238 aa9.98□□□□□ -0.81
PRPF40A-203ENST00000448428 IGHG4P01861 327 aa9.98□□□□□ -0.81
PRPF40A-203ENST00000448428 IGKV1-16P04430 117 aa9.98□□□□□ -0.81
PRPF40A-203ENST00000448428 ELANEP08246 267 aa9.98□□□□□ -0.81
PRPF40A-203ENST00000448428 VDAC1P21796 283 aa9.98□□□□□ -0.81
PRPF40A-203ENST00000448428 PPIFP30405 207 aaKnown RBP9.98□□□□□ -0.81
PRPF40A-203ENST00000448428 RPS16P62249 146 aaKnown RBP9.98□□□□□ -0.81
PRPF40A-203ENST00000448428 FOXE3Q13461 319 aa9.98□□□□□ -0.81
PRPF40A-203ENST00000448428 PSG5Q15238 335 aa9.98□□□□□ -0.81
PRPF40A-203ENST00000448428 KPRPQ5T749 579 aaPredicted RBP9.98□□□□□ -0.81
PRPF40A-203ENST00000448428 ETV3LQ6ZN32 361 aa9.98□□□□□ -0.81
PRPF40A-203ENST00000448428 C8orf86Q6ZUL3 223 aa9.98□□□□□ -0.81
PRPF40A-203ENST00000448428 CROCCP3Q8IVE0 287 aa9.98□□□□□ -0.81
PRPF40A-203ENST00000448428 RNF152Q8N8N0 203 aa9.98□□□□□ -0.81
PRPF40A-203ENST00000448428 SPATA2Q9UM82 520 aa9.98□□□□□ -0.81
PRPF40A-203ENST00000448428 RBM7Q9Y580 266 aaKnown RBP9.98□□□□□ -0.81
PRPF40A-203ENST00000448428 A0A0A6YYH2 397 aa9.97□□□□□ -0.81
PRPF40A-203ENST00000448428 A6NJ64 397 aa9.97□□□□□ -0.81
PRPF40A-203ENST00000448428 NUDT19A8MXV4 375 aa9.97□□□□□ -0.81
PRPF40A-203ENST00000448428 APOA2P02652 100 aa9.97□□□□□ -0.81
PRPF40A-203ENST00000448428 CTXN2P0C2S0 81 aa9.97□□□□□ -0.81
PRPF40A-203ENST00000448428 IGLL1P15814 213 aa9.97□□□□□ -0.81
PRPF40A-203ENST00000448428 THBS3P49746 956 aa9.97□□□□□ -0.81
PRPF40A-203ENST00000448428 CX3CL1P78423 397 aa9.97□□□□□ -0.81
PRPF40A-203ENST00000448428 PLGLAQ15195 96 aa9.97□□□□□ -0.81
PRPF40A-203ENST00000448428 CXorf66Q5JRM2 361 aaPredicted RBP9.97□□□□□ -0.81
PRPF40A-203ENST00000448428 CNIH2Q6PI25 160 aa9.97□□□□□ -0.81
PRPF40A-203ENST00000448428 PDPNQ86YL7 162 aa9.97□□□□□ -0.81
PRPF40A-203ENST00000448428 ZNF695Q8IW36 515 aa9.97□□□□□ -0.81
PRPF40A-203ENST00000448428 KLHL30-AS1Q8NEE0 82 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms