RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 CEACAM6P40199 344 aa21.84■■□□□ 1.09
CBX4-202ENST00000448310 LIPKQ5VXJ0 399 aa21.84■■□□□ 1.09
CBX4-202ENST00000448310 PPP1R27Q86WC6 154 aa21.84■■□□□ 1.09
CBX4-202ENST00000448310 OR5AN1Q8NGI8 311 aa21.84■■□□□ 1.09
CBX4-202ENST00000448310 ARPC1AQ92747 370 aa21.84■■□□□ 1.09
CBX4-202ENST00000448310 MS4A10Q96PG2 267 aa21.84■■□□□ 1.09
CBX4-202ENST00000448310 TRBV6-6A0A0A6YYG2 114 aa21.83■■□□□ 1.09
CBX4-202ENST00000448310 HSPA12AO43301 675 aa21.83■■□□□ 1.09
CBX4-202ENST00000448310 SCTP09683 121 aa21.83■■□□□ 1.09
CBX4-202ENST00000448310 LINC00205P59089 165 aa21.83■■□□□ 1.09
CBX4-202ENST00000448310 UNQ5815/PRO19632Q6UWF5 114 aa21.83■■□□□ 1.09
CBX4-202ENST00000448310 TCTEX1D1Q8N7M0 179 aa21.83■■□□□ 1.09
CBX4-202ENST00000448310 RIMS4Q9H426 269 aaPredicted RBP21.83■■□□□ 1.09
CBX4-202ENST00000448310 PLGRKTQ9HBL7 147 aa21.83■■□□□ 1.09
CBX4-202ENST00000448310 METTL1Q9UBP6 276 aaKnown RBP21.83■■□□□ 1.09
CBX4-202ENST00000448310 ITGB1BP1O14713 200 aa21.82■■□□□ 1.08
CBX4-202ENST00000448310 PROP1O75360 226 aa21.82■■□□□ 1.08
CBX4-202ENST00000448310 ZBTB25P24278 435 aa21.82■■□□□ 1.08
CBX4-202ENST00000448310 TMEM267Q0VDI3 215 aaPredicted RBP21.82■■□□□ 1.08
CBX4-202ENST00000448310 ACTBL2Q562R1 376 aa21.82■■□□□ 1.08
CBX4-202ENST00000448310 CD200R1LQ6Q8B3 271 aa21.82■■□□□ 1.08
CBX4-202ENST00000448310 OVCH2Q7RTZ1 564 aa21.82■■□□□ 1.08
CBX4-202ENST00000448310 SBSPONQ8IVN8 264 aa21.82■■□□□ 1.08
CBX4-202ENST00000448310 URM1Q9BTM9 101 aaKnown RBP21.82■■□□□ 1.08
CBX4-202ENST00000448310 AK6Q9Y3D8 172 aaKnown RBP21.82■■□□□ 1.08
CBX4-202ENST00000448310 DNAH7Q8WXX0 4024 aa21.82■■□□□ 1.08
CBX4-202ENST00000448310 RBBP9O75884 186 aa21.81■■□□□ 1.08
CBX4-202ENST00000448310 ARSBP15848 533 aa21.81■■□□□ 1.08
CBX4-202ENST00000448310 PSG5Q15238 335 aa21.81■■□□□ 1.08
CBX4-202ENST00000448310 LFNGQ8NES3 379 aa21.81■■□□□ 1.08
CBX4-202ENST00000448310 EDARADDQ8WWZ3 215 aa21.81■■□□□ 1.08
CBX4-202ENST00000448310 UFD1Q92890 307 aa21.81■■□□□ 1.08
CBX4-202ENST00000448310 Q9N2K0 584 aa21.81■■□□□ 1.08
CBX4-202ENST00000448310 FOXI3A8MTJ6 420 aaPredicted RBP21.8■■□□□ 1.08
CBX4-202ENST00000448310 CA2P00918 260 aa21.8■■□□□ 1.08
CBX4-202ENST00000448310 IGKV1-16P04430 117 aa21.8■■□□□ 1.08
CBX4-202ENST00000448310 CPEP16870 476 aa21.8■■□□□ 1.08
CBX4-202ENST00000448310 TMEM50BP56557 158 aa21.8■■□□□ 1.08
CBX4-202ENST00000448310 TPPP2P59282 170 aa21.8■■□□□ 1.08
CBX4-202ENST00000448310 RPS25P62851 125 aaKnown RBP21.8■■□□□ 1.08
CBX4-202ENST00000448310 IRF3Q14653 427 aa21.8■■□□□ 1.08
CBX4-202ENST00000448310 ACSM6Q6P461 480 aa21.8■■□□□ 1.08
CBX4-202ENST00000448310 TMEM91Q6ZNR0 172 aa21.8■■□□□ 1.08
CBX4-202ENST00000448310 FAM89BQ8N5H3 189 aa21.8■■□□□ 1.08
CBX4-202ENST00000448310 ARHGAP5-AS1Q96IT6 56 aa21.8■■□□□ 1.08
CBX4-202ENST00000448310 VCXQ9H320 206 aa21.8■■□□□ 1.08
CBX4-202ENST00000448310 GHITMQ9H3K2 345 aa21.8■■□□□ 1.08
CBX4-202ENST00000448310 SLC17A2O00624 439 aa21.79■■□□□ 1.08
CBX4-202ENST00000448310 GP9P14770 177 aa21.79■■□□□ 1.08
CBX4-202ENST00000448310 VEGFCP49767 419 aa21.79■■□□□ 1.08
CBX4-202ENST00000448310 CLDN12P56749 244 aa21.79■■□□□ 1.08
CBX4-202ENST00000448310 AKIRIN2Q53H80 203 aa21.79■■□□□ 1.08
CBX4-202ENST00000448310 PYHIN1Q6K0P9 492 aa21.79■■□□□ 1.08
CBX4-202ENST00000448310 ZNF383Q8NA42 475 aa21.79■■□□□ 1.08
CBX4-202ENST00000448310 RNF5Q99942 180 aa21.79■■□□□ 1.08
CBX4-202ENST00000448310 C12orf4Q9NQ89 552 aa21.79■■□□□ 1.08
CBX4-202ENST00000448310 SCN3BQ9NY72 215 aa21.79■■□□□ 1.08
CBX4-202ENST00000448310 IGKV1-6A0A0C4DH72 117 aa21.78■■□□□ 1.08
CBX4-202ENST00000448310 HSMCR30P0CW71 290 aa21.78■■□□□ 1.08
CBX4-202ENST00000448310 RPS16P62249 146 aaKnown RBP21.78■■□□□ 1.08
CBX4-202ENST00000448310 ZNF562Q6V9R5 426 aa21.78■■□□□ 1.08
CBX4-202ENST00000448310 RCHY1Q96PM5 261 aa21.78■■□□□ 1.08
CBX4-202ENST00000448310 PECRQ9BY49 303 aa21.78■■□□□ 1.08
CBX4-202ENST00000448310 HSF4Q9ULV5 492 aa21.78■■□□□ 1.08
CBX4-202ENST00000448310 MGAT4AQ9UM21 535 aa21.78■■□□□ 1.08
CBX4-202ENST00000448310 DYNC2H1Q8NCM8 4307 aaKnown RBP21.77■■□□□ 1.08
CBX4-202ENST00000448310 TRIM64CA6NLI5 447 aa21.77■■□□□ 1.08
CBX4-202ENST00000448310 C3orf84H3BNL1 204 aa21.77■■□□□ 1.08
CBX4-202ENST00000448310 HSPB1P04792 205 aaKnown RBP21.77■■□□□ 1.08
CBX4-202ENST00000448310 FRMD6-AS1P0C7T7 363 aa21.77■■□□□ 1.08
CBX4-202ENST00000448310 RAB11BQ15907 218 aa21.77■■□□□ 1.08
CBX4-202ENST00000448310 HAPLN4Q86UW8 402 aa21.77■■□□□ 1.08
CBX4-202ENST00000448310 OR6Q1Q8NGQ2 317 aa21.77■■□□□ 1.08
CBX4-202ENST00000448310 GRPEL2Q8TAA5 225 aa21.77■■□□□ 1.08
CBX4-202ENST00000448310 PTX4Q96A99 478 aa21.77■■□□□ 1.08
CBX4-202ENST00000448310 TSNAXQ99598 290 aaKnown RBP21.77■■□□□ 1.08
CBX4-202ENST00000448310 CMSS1Q9BQ75 279 aaKnown RBP21.77■■□□□ 1.08
CBX4-202ENST00000448310 ZNF221Q9UK13 617 aa21.77■■□□□ 1.08
CBX4-202ENST00000448310 OR8U9P0C7N5 309 aa21.76■■□□□ 1.07
CBX4-202ENST00000448310 PITPNAQ00169 270 aa21.76■■□□□ 1.07
CBX4-202ENST00000448310 FLYWCH2Q96CP2 140 aaKnown RBP21.76■■□□□ 1.07
CBX4-202ENST00000448310 RHOVQ96L33 236 aa21.76■■□□□ 1.07
CBX4-202ENST00000448310 ANKRD65E5RJM6 399 aa21.75■■□□□ 1.07
CBX4-202ENST00000448310 ARPC1BO15143 372 aaKnown RBP21.75■■□□□ 1.07
CBX4-202ENST00000448310 SLC25A17O43808 307 aa21.75■■□□□ 1.07
CBX4-202ENST00000448310 TRGV3P03979 118 aa21.75■■□□□ 1.07
CBX4-202ENST00000448310 TFAP2AP05549 437 aa21.75■■□□□ 1.07
CBX4-202ENST00000448310 PLAC9Q5JTB6 97 aa21.75■■□□□ 1.07
CBX4-202ENST00000448310 RDH8Q9NYR8 311 aa21.75■■□□□ 1.07
CBX4-202ENST00000448310 M0R1X1 148 aa21.74■■□□□ 1.07
CBX4-202ENST00000448310 SPDEFO95238 335 aa21.74■■□□□ 1.07
CBX4-202ENST00000448310 CD40LGP29965 261 aa21.74■■□□□ 1.07
CBX4-202ENST00000448310 PLA2G7Q13093 441 aa21.74■■□□□ 1.07
CBX4-202ENST00000448310 TPBGQ13641 420 aa21.74■■□□□ 1.07
CBX4-202ENST00000448310 FXYD3Q14802 87 aa21.74■■□□□ 1.07
CBX4-202ENST00000448310 SRSF7Q16629 238 aaKnown RBP eCLIP21.74■■□□□ 1.07
CBX4-202ENST00000448310 PDPNQ86YL7 162 aa21.74■■□□□ 1.07
CBX4-202ENST00000448310 OR4C12Q96R67 309 aa21.74■■□□□ 1.07
CBX4-202ENST00000448310 SLA2Q9H6Q3 261 aa21.74■■□□□ 1.07
CBX4-202ENST00000448310 ZNF355PQ9NSJ1 428 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms