RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 TXNDC17Q9BRA2 123 aa16.33■□□□□ 0.2
HMGA1-205ENST00000447654 RBM24Q9BX46 236 aaKnown RBP16.33■□□□□ 0.2
HMGA1-205ENST00000447654 ADAMTS9Q9P2N4 1935 aa16.33■□□□□ 0.2
HMGA1-205ENST00000447654 C9orf172C9J069 976 aa16.33■□□□□ 0.2
HMGA1-205ENST00000447654 S1PR2O95136 353 aa16.33■□□□□ 0.2
HMGA1-205ENST00000447654 MT-ND6P03923 174 aa16.33■□□□□ 0.2
HMGA1-205ENST00000447654 KITLGP21583 273 aa16.33■□□□□ 0.2
HMGA1-205ENST00000447654 SRSF7Q16629 238 aaKnown RBP eCLIP16.33■□□□□ 0.2
HMGA1-205ENST00000447654 TRIM61Q5EBN2 209 aa16.33■□□□□ 0.2
HMGA1-205ENST00000447654 CLDN23Q96B33 292 aa16.33■□□□□ 0.2
HMGA1-205ENST00000447654 GLB1P16278 677 aa16.32■□□□□ 0.2
HMGA1-205ENST00000447654 RHOBP62745 196 aa16.32■□□□□ 0.2
HMGA1-205ENST00000447654 SAXO1Q8IYX7 474 aa16.32■□□□□ 0.2
HMGA1-205ENST00000447654 GNB1LQ9BYB4 327 aa16.32■□□□□ 0.2
HMGA1-205ENST00000447654 FSCN3Q9NQT6 498 aa16.32■□□□□ 0.2
HMGA1-205ENST00000447654 ADAMTS20P59510 1910 aa16.32■□□□□ 0.2
HMGA1-205ENST00000447654 PSG1P11464 419 aa16.31■□□□□ 0.2
HMGA1-205ENST00000447654 S100A7P31151 101 aa16.31■□□□□ 0.2
HMGA1-205ENST00000447654 ARL4DP49703 201 aa16.31■□□□□ 0.2
HMGA1-205ENST00000447654 HLA-DRB5Q30154 266 aa16.31■□□□□ 0.2
HMGA1-205ENST00000447654 PLXDC1Q8IUK5 500 aa16.31■□□□□ 0.2
HMGA1-205ENST00000447654 OR4S2Q8NH73 311 aa16.31■□□□□ 0.2
HMGA1-205ENST00000447654 STRADBQ9C0K7 418 aa16.31■□□□□ 0.2
HMGA1-205ENST00000447654 PNRC2Q9NPJ4 139 aaKnown RBP16.31■□□□□ 0.2
HMGA1-205ENST00000447654 PRDM6Q9NQX0 595 aa16.31■□□□□ 0.2
HMGA1-205ENST00000447654 RNF114Q9Y508 228 aa16.31■□□□□ 0.2
HMGA1-205ENST00000447654 DUX1O43812 170 aa16.31■□□□□ 0.2
HMGA1-205ENST00000447654 GDF9O60383 454 aa16.31■□□□□ 0.2
HMGA1-205ENST00000447654 ZNF205O95201 554 aa16.31■□□□□ 0.2
HMGA1-205ENST00000447654 CXCL12P48061 93 aa16.31■□□□□ 0.2
HMGA1-205ENST00000447654 AMTP48728 403 aa16.31■□□□□ 0.2
HMGA1-205ENST00000447654 TLE3Q04726 772 aa16.31■□□□□ 0.2
HMGA1-205ENST00000447654 STUMQ69YW2 141 aa16.31■□□□□ 0.2
HMGA1-205ENST00000447654 ABHD3Q8WU67 409 aa16.31■□□□□ 0.2
HMGA1-205ENST00000447654 TMEM234Q8WY98 164 aa16.31■□□□□ 0.2
HMGA1-205ENST00000447654 ZNF501Q96CX3 271 aaPredicted RBP16.31■□□□□ 0.2
HMGA1-205ENST00000447654 LRFN3Q9BTN0 628 aa16.31■□□□□ 0.2
HMGA1-205ENST00000447654 MRPL13Q9BYD1 178 aaKnown RBP16.31■□□□□ 0.2
HMGA1-205ENST00000447654 IL36BQ9NZH7 164 aa16.31■□□□□ 0.2
HMGA1-205ENST00000447654 TRAV34A0A0B4J273 112 aa16.3■□□□□ 0.2
HMGA1-205ENST00000447654 C11orf94C9JXX5 98 aa16.3■□□□□ 0.2
HMGA1-205ENST00000447654 POU3F1Q03052 451 aaPredicted RBP16.3■□□□□ 0.2
HMGA1-205ENST00000447654 OR4A47Q6IF82 309 aa16.3■□□□□ 0.2
HMGA1-205ENST00000447654 ZNF596Q8TC21 504 aa16.3■□□□□ 0.2
HMGA1-205ENST00000447654 SF3B5Q9BWJ5 86 aaKnown RBP16.3■□□□□ 0.2
HMGA1-205ENST00000447654 KCNIP2Q9NS61 270 aa16.3■□□□□ 0.2
HMGA1-205ENST00000447654 TRAV9-2A0A087WT02 112 aa16.3■□□□□ 0.2
HMGA1-205ENST00000447654 SH2D1BO14796 132 aa16.3■□□□□ 0.2
HMGA1-205ENST00000447654 SYNGR2O43760 224 aa16.3■□□□□ 0.2
HMGA1-205ENST00000447654 IGKV1D-33P01593 117 aa16.3■□□□□ 0.2
HMGA1-205ENST00000447654 IGKV1-33P01594 117 aa16.3■□□□□ 0.2
HMGA1-205ENST00000447654 SCGB1A1P11684 91 aa16.3■□□□□ 0.2
HMGA1-205ENST00000447654 CBLN1P23435 193 aa16.3■□□□□ 0.2
HMGA1-205ENST00000447654 OR52L2PQ8NGH6 319 aa16.3■□□□□ 0.2
HMGA1-205ENST00000447654 OR4C12Q96R67 309 aa16.3■□□□□ 0.2
HMGA1-205ENST00000447654 FGF21Q9NSA1 209 aa16.3■□□□□ 0.2
HMGA1-205ENST00000447654 PSENENQ9NZ42 101 aa16.3■□□□□ 0.2
HMGA1-205ENST00000447654 IGHV3-20A0A0C4DH32 117 aa16.29■□□□□ 0.2
HMGA1-205ENST00000447654 CCDC163A0A0D9SF12 145 aa16.29■□□□□ 0.2
HMGA1-205ENST00000447654 AQP7P3A6NL99 342 aa16.29■□□□□ 0.2
HMGA1-205ENST00000447654 PAGE4O60829 102 aa16.29■□□□□ 0.2
HMGA1-205ENST00000447654 C3orf79P0CE67 100 aa16.29■□□□□ 0.2
HMGA1-205ENST00000447654 CD46P15529 392 aa16.29■□□□□ 0.2
HMGA1-205ENST00000447654 FBLP22087 321 aaKnown RBP16.29■□□□□ 0.2
HMGA1-205ENST00000447654 NPPCP23582 126 aa16.29■□□□□ 0.2
HMGA1-205ENST00000447654 CLDN15P56746 228 aa16.29■□□□□ 0.2
HMGA1-205ENST00000447654 PRSS57Q6UWY2 283 aa16.29■□□□□ 0.2
HMGA1-205ENST00000447654 C16orf47Q6ZP98 133 aaPredicted RBP16.29■□□□□ 0.2
HMGA1-205ENST00000447654 OR10G8Q8NGN5 311 aa16.29■□□□□ 0.2
HMGA1-205ENST00000447654 MEGF9Q9H1U4 602 aa16.29■□□□□ 0.2
HMGA1-205ENST00000447654 PLA2G3Q9NZ20 509 aa16.29■□□□□ 0.2
HMGA1-205ENST00000447654 LIPT2A6NK58 231 aa16.28■□□□□ 0.2
HMGA1-205ENST00000447654 TAX1BP3O14907 124 aa16.28■□□□□ 0.2
HMGA1-205ENST00000447654 ZNF324O75467 553 aaPredicted RBP16.28■□□□□ 0.2
HMGA1-205ENST00000447654 S100GP29377 79 aa16.28■□□□□ 0.2
HMGA1-205ENST00000447654 ZNF90Q03938 601 aa16.28■□□□□ 0.2
HMGA1-205ENST00000447654 ARL16Q0P5N6 197 aa16.28■□□□□ 0.2
HMGA1-205ENST00000447654 WDR73Q6P4I2 378 aa16.28■□□□□ 0.2
HMGA1-205ENST00000447654 LSM10Q969L4 123 aaKnown RBP16.28■□□□□ 0.2
HMGA1-205ENST00000447654 LYZL4Q96KX0 146 aa16.28■□□□□ 0.2
HMGA1-205ENST00000447654 FAM103A1Q9BTL3 118 aaKnown RBP16.28■□□□□ 0.2
HMGA1-205ENST00000447654 SFXN3Q9BWM7 321 aa16.28■□□□□ 0.2
HMGA1-205ENST00000447654 GNB4Q9HAV0 340 aa16.28■□□□□ 0.2
HMGA1-205ENST00000447654 H3BP45 60 aa16.28■□□□□ 0.2
HMGA1-205ENST00000447654 FCN1O00602 326 aa16.28■□□□□ 0.2
HMGA1-205ENST00000447654 TIMP3P35625 211 aa16.28■□□□□ 0.2
HMGA1-205ENST00000447654 MRPL49Q13405 166 aaKnown RBP16.28■□□□□ 0.2
HMGA1-205ENST00000447654 HAPLN4Q86UW8 402 aa16.28■□□□□ 0.2
HMGA1-205ENST00000447654 BATF2Q8N1L9 274 aa16.28■□□□□ 0.2
HMGA1-205ENST00000447654 DEFB125Q8N687 156 aa16.28■□□□□ 0.2
HMGA1-205ENST00000447654 OR6C1Q96RD1 312 aa16.28■□□□□ 0.2
HMGA1-205ENST00000447654 SLC7A10Q9NS82 523 aa16.28■□□□□ 0.2
HMGA1-205ENST00000447654 IL36GQ9NZH8 169 aa16.28■□□□□ 0.2
HMGA1-205ENST00000447654 GAGE12BA1L429 117 aa16.27■□□□□ 0.2
HMGA1-205ENST00000447654 C1QTNF9BB2RNN3 333 aa16.27■□□□□ 0.2
HMGA1-205ENST00000447654 COX5AP20674 150 aa16.27■□□□□ 0.2
HMGA1-205ENST00000447654 IL12BP29460 328 aa16.27■□□□□ 0.2
HMGA1-205ENST00000447654 OR10G9Q8NGN4 311 aa16.27■□□□□ 0.2
HMGA1-205ENST00000447654 OR10G7Q8NGN6 311 aa16.27■□□□□ 0.2
HMGA1-205ENST00000447654 NAT6Q93015 286 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms