RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 FBXW9Q5XUX1 488 aa16.04■□□□□ 0.16
SDCBP-204ENST00000447182 ACY3Q96HD9 319 aa16.04■□□□□ 0.16
SDCBP-204ENST00000447182 SMOC1Q9H4F8 434 aa16.04■□□□□ 0.16
SDCBP-204ENST00000447182 KCNIP1Q9NZI2 227 aa16.04■□□□□ 0.16
SDCBP-204ENST00000447182 ODAMA1E959 279 aa16.03■□□□□ 0.16
SDCBP-204ENST00000447182 KRASP01116 189 aa16.03■□□□□ 0.16
SDCBP-204ENST00000447182 COX5AP20674 150 aa16.03■□□□□ 0.16
SDCBP-204ENST00000447182 G6PCP35575 357 aa16.03■□□□□ 0.16
SDCBP-204ENST00000447182 PDLIM4P50479 330 aa16.03■□□□□ 0.16
SDCBP-204ENST00000447182 OR10P1Q8NGE3 313 aa16.03■□□□□ 0.16
SDCBP-204ENST00000447182 DDA1Q9BW61 102 aa16.03■□□□□ 0.16
SDCBP-204ENST00000447182 FREM2Q5SZK8 3169 aa16.03■□□□□ 0.16
SDCBP-204ENST00000447182 MKRN2OSH3BPM6 223 aa16.03■□□□□ 0.16
SDCBP-204ENST00000447182 VENTXO95231 258 aa16.03■□□□□ 0.16
SDCBP-204ENST00000447182 FGF7P21781 194 aa16.03■□□□□ 0.16
SDCBP-204ENST00000447182 RPL30P62888 115 aaKnown RBP16.03■□□□□ 0.16
SDCBP-204ENST00000447182 PLGLB1Q02325 96 aa16.03■□□□□ 0.16
SDCBP-204ENST00000447182 CATR1Q13166 79 aa16.03■□□□□ 0.16
SDCBP-204ENST00000447182 FFAR4Q5NUL3 377 aa16.03■□□□□ 0.16
SDCBP-204ENST00000447182 TMEM170AQ8WVE7 144 aa16.03■□□□□ 0.16
SDCBP-204ENST00000447182 GALMQ96C23 342 aa16.03■□□□□ 0.16
SDCBP-204ENST00000447182 C5orf30Q96GV9 206 aa16.03■□□□□ 0.16
SDCBP-204ENST00000447182 CIB3Q96Q77 187 aaPredicted RBP16.03■□□□□ 0.16
SDCBP-204ENST00000447182 OR2D2Q9H210 308 aa16.03■□□□□ 0.16
SDCBP-204ENST00000447182 CLN8Q9UBY8 286 aa16.03■□□□□ 0.16
SDCBP-204ENST00000447182 A0A087X0M5 115 aa16.02■□□□□ 0.16
SDCBP-204ENST00000447182 A0A1B0GX30 115 aa16.02■□□□□ 0.16
SDCBP-204ENST00000447182 TMEM30CPA0ZSE6 113 aa16.02■□□□□ 0.16
SDCBP-204ENST00000447182 CDIPTO14735 213 aa16.02■□□□□ 0.16
SDCBP-204ENST00000447182 SMPD2O60906 423 aa16.02■□□□□ 0.16
SDCBP-204ENST00000447182 GZMBP10144 247 aa16.02■□□□□ 0.16
SDCBP-204ENST00000447182 C3AR1Q16581 482 aa16.02■□□□□ 0.16
SDCBP-204ENST00000447182 ZNF766Q5HY98 468 aa16.02■□□□□ 0.16
SDCBP-204ENST00000447182 TCTEX1D1Q8N7M0 179 aa16.02■□□□□ 0.16
SDCBP-204ENST00000447182 NECAP1Q8NC96 275 aa16.02■□□□□ 0.16
SDCBP-204ENST00000447182 OR4F5Q8NH21 305 aa16.02■□□□□ 0.16
SDCBP-204ENST00000447182 OR4F4Q96R69 305 aa16.02■□□□□ 0.16
SDCBP-204ENST00000447182 NPCDR1Q9BY65 106 aa16.02■□□□□ 0.16
SDCBP-204ENST00000447182 C12orf49Q9H741 205 aa16.02■□□□□ 0.16
SDCBP-204ENST00000447182 HES4Q9HCC6 221 aa16.02■□□□□ 0.16
SDCBP-204ENST00000447182 C1QTNF9BB2RNN3 333 aa16.01■□□□□ 0.15
SDCBP-204ENST00000447182 HMGB3O15347 200 aaKnown RBP16.01■□□□□ 0.15
SDCBP-204ENST00000447182 GGCTO75223 188 aaKnown RBP16.01■□□□□ 0.15
SDCBP-204ENST00000447182 HAND1O96004 215 aa16.01■□□□□ 0.15
SDCBP-204ENST00000447182 TYMSP04818 313 aa16.01■□□□□ 0.15
SDCBP-204ENST00000447182 RAC2P15153 192 aa16.01■□□□□ 0.15
SDCBP-204ENST00000447182 SSTP61278 116 aa16.01■□□□□ 0.15
SDCBP-204ENST00000447182 ERVS71-1P61550 626 aa16.01■□□□□ 0.15
SDCBP-204ENST00000447182 PPP1CBP62140 327 aa16.01■□□□□ 0.15
SDCBP-204ENST00000447182 GABRA6Q16445 453 aa16.01■□□□□ 0.15
SDCBP-204ENST00000447182 OR1L1Q8NH94 360 aa16.01■□□□□ 0.15
SDCBP-204ENST00000447182 DTD1Q8TEA8 209 aa16.01■□□□□ 0.15
SDCBP-204ENST00000447182 RAB24Q969Q5 203 aa16.01■□□□□ 0.15
SDCBP-204ENST00000447182 VPS13AQ96RL7 3174 aa16.01■□□□□ 0.15
SDCBP-204ENST00000447182 XKRY2A2RUG3 117 aa16.01■□□□□ 0.15
SDCBP-204ENST00000447182 C12orf77C9JDV5 145 aa16.01■□□□□ 0.15
SDCBP-204ENST00000447182 RAB29O14966 203 aa16.01■□□□□ 0.15
SDCBP-204ENST00000447182 CLDN14O95500 239 aa16.01■□□□□ 0.15
SDCBP-204ENST00000447182 SRP14P37108 136 aaKnown RBP16.01■□□□□ 0.15
SDCBP-204ENST00000447182 BRWD1-AS2P59051 145 aa16.01■□□□□ 0.15
SDCBP-204ENST00000447182 ZNF816Q0VGE8 651 aaPredicted RBP16.01■□□□□ 0.15
SDCBP-204ENST00000447182 NEIL1Q96FI4 390 aaPredicted RBP16.01■□□□□ 0.15
SDCBP-204ENST00000447182 OR2J1Q9GZK6 312 aa16.01■□□□□ 0.15
SDCBP-204ENST00000447182 PLA2G3Q9NZ20 509 aa16.01■□□□□ 0.15
SDCBP-204ENST00000447182 FRYLO94915 3013 aa16.01■□□□□ 0.15
SDCBP-204ENST00000447182 OOEPA6NGQ2 149 aa16■□□□□ 0.15
SDCBP-204ENST00000447182 TMEM210A6NLX4 147 aa16■□□□□ 0.15
SDCBP-204ENST00000447182 PSPNO60542 156 aa16■□□□□ 0.15
SDCBP-204ENST00000447182 ZG16O60844 167 aa16■□□□□ 0.15
SDCBP-204ENST00000447182 S1PR2O95136 353 aa16■□□□□ 0.15
SDCBP-204ENST00000447182 GYPAP02724 150 aa16■□□□□ 0.15
SDCBP-204ENST00000447182 OR3A1P47881 315 aa16■□□□□ 0.15
SDCBP-204ENST00000447182 MRPL49Q13405 166 aaKnown RBP16■□□□□ 0.15
SDCBP-204ENST00000447182 SLC35E4Q6ICL7 350 aa16■□□□□ 0.15
SDCBP-204ENST00000447182 FIP1L1Q6UN15 594 aaKnown RBP16■□□□□ 0.15
SDCBP-204ENST00000447182 ZNF66Q6ZN08 573 aa16■□□□□ 0.15
SDCBP-204ENST00000447182 SSX9Q7RTT3 188 aa16■□□□□ 0.15
SDCBP-204ENST00000447182 GATAD1Q8WUU5 269 aa16■□□□□ 0.15
SDCBP-204ENST00000447182 PCGF1Q9BSM1 259 aa16■□□□□ 0.15
SDCBP-204ENST00000447182 ELOVL1Q9BW60 279 aa16■□□□□ 0.15
SDCBP-204ENST00000447182 PRO1933Q9H354 126 aa16■□□□□ 0.15
SDCBP-204ENST00000447182 R4GN57 208 aa16■□□□□ 0.15
SDCBP-204ENST00000447182 USF3Q68DE3 2245 aa16■□□□□ 0.15
SDCBP-204ENST00000447182 IQCF6A8MYZ5 107 aa16■□□□□ 0.15
SDCBP-204ENST00000447182 TUBG1P23258 451 aa16■□□□□ 0.15
SDCBP-204ENST00000447182 PLA2G5P39877 138 aa16■□□□□ 0.15
SDCBP-204ENST00000447182 GNB2P62879 340 aa16■□□□□ 0.15
SDCBP-204ENST00000447182 TFF3Q07654 80 aa16■□□□□ 0.15
SDCBP-204ENST00000447182 HNF4GQ14541 408 aa16■□□□□ 0.15
SDCBP-204ENST00000447182 RTP5Q14D33 572 aa16■□□□□ 0.15
SDCBP-204ENST00000447182 ACTL10Q5JWF8 245 aa16■□□□□ 0.15
SDCBP-204ENST00000447182 DCAF10Q5QP82 559 aa16■□□□□ 0.15
SDCBP-204ENST00000447182 MYPOPQ86VE0 399 aaPredicted RBP16■□□□□ 0.15
SDCBP-204ENST00000447182 TMEM105Q8N8V8 129 aa16■□□□□ 0.15
SDCBP-204ENST00000447182 ZNF709Q8N972 641 aa16■□□□□ 0.15
SDCBP-204ENST00000447182 DIRC2Q96SL1 478 aa16■□□□□ 0.15
SDCBP-204ENST00000447182 DIDO1Q9BTC0 2240 aaKnown RBP15.99■□□□□ 0.15
SDCBP-204ENST00000447182 C17orf98A8MV24 154 aa15.99■□□□□ 0.15
SDCBP-204ENST00000447182 C9orf172C9J069 976 aa15.99■□□□□ 0.15
SDCBP-204ENST00000447182 GCGP01275 180 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms