RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	MAP1LC3B2	A6NCE7	125 aa		10.66	□□□□□ -0.7
DDR1-238	ENST00000446312	NPIPB13	A6NJU9	1138 aa		10.66	□□□□□ -0.7
DDR1-238	ENST00000446312	NPIPB4	C9JG80	1138 aa		10.66	□□□□□ -0.7
DDR1-238	ENST00000446312	VAMP5	O95183	116 aa		10.66	□□□□□ -0.7
DDR1-238	ENST00000446312	COX6A1	P12074	109 aa		10.66	□□□□□ -0.7
DDR1-238	ENST00000446312	DTYMK	P23919	212 aa		10.66	□□□□□ -0.7
DDR1-238	ENST00000446312	ZNF826P	Q6ZT77	177 aa		10.66	□□□□□ -0.7
DDR1-238	ENST00000446312	SLC35E3	Q7Z769	313 aa		10.66	□□□□□ -0.7
DDR1-238	ENST00000446312	WDR5B	Q86VZ2	330 aa		10.66	□□□□□ -0.7
DDR1-238	ENST00000446312	MAP1LC3B	Q9GZQ8	125 aa		10.66	□□□□□ -0.7
DDR1-238	ENST00000446312	KIAA1456	Q9P272	454 aa		10.66	□□□□□ -0.7
DDR1-238	ENST00000446312	KALRN	O60229	2985 aa		10.66	□□□□□ -0.7
DDR1-238	ENST00000446312	PITX3	O75364	302 aa		10.65	□□□□□ -0.7
DDR1-238	ENST00000446312	WNT5A	P41221	380 aa		10.65	□□□□□ -0.7
DDR1-238	ENST00000446312	CXCL12	P48061	93 aa		10.65	□□□□□ -0.7
DDR1-238	ENST00000446312	COL10A1	Q03692	680 aa		10.65	□□□□□ -0.7
DDR1-238	ENST00000446312	C10orf128	Q5T292	105 aa		10.65	□□□□□ -0.7
DDR1-238	ENST00000446312	LYG1	Q8N1E2	194 aa		10.65	□□□□□ -0.7
DDR1-238	ENST00000446312	OR1P1	Q8NH06	330 aa		10.65	□□□□□ -0.7
DDR1-238	ENST00000446312	TECTB	Q96PL2	329 aa		10.65	□□□□□ -0.7
DDR1-238	ENST00000446312	TBX15	Q96SF7	602 aa		10.65	□□□□□ -0.7
DDR1-238	ENST00000446312	IGHV1-45	A0A0A0MS14	117 aa		10.65	□□□□□ -0.7
DDR1-238	ENST00000446312	LRRC3C	A6NJW4	275 aa		10.65	□□□□□ -0.7
DDR1-238	ENST00000446312	C1QTNF9B	B2RNN3	333 aa		10.65	□□□□□ -0.7
DDR1-238	ENST00000446312	VDAC1	P21796	283 aa		10.65	□□□□□ -0.7
DDR1-238	ENST00000446312	OTX1	P32242	354 aa	Predicted RBP	10.65	□□□□□ -0.7
DDR1-238	ENST00000446312	NUFIP2	Q7Z417	695 aa	Known RBP	10.65	□□□□□ -0.7
DDR1-238	ENST00000446312	MRGPRD	Q8TDS7	321 aa		10.65	□□□□□ -0.7
DDR1-238	ENST00000446312	ATP5S	Q99766	215 aa		10.65	□□□□□ -0.7
DDR1-238	ENST00000446312	SPIN2A	Q99865	258 aa		10.65	□□□□□ -0.7
DDR1-238	ENST00000446312	SPIN2B	Q9BPZ2	258 aa		10.65	□□□□□ -0.7
DDR1-238	ENST00000446312	IL19	Q9UHD0	177 aa		10.65	□□□□□ -0.7
DDR1-238	ENST00000446312	AKAP6	Q13023	2319 aa		10.65	□□□□□ -0.7
DDR1-238	ENST00000446312	RAMP3	O60896	148 aa		10.65	□□□□□ -0.71
DDR1-238	ENST00000446312	IGKV1D-33	P01593	117 aa		10.65	□□□□□ -0.71
DDR1-238	ENST00000446312	IGKV1-33	P01594	117 aa		10.65	□□□□□ -0.71
DDR1-238	ENST00000446312	GLIPR1	P48060	266 aa		10.65	□□□□□ -0.71
DDR1-238	ENST00000446312	EXT1	Q16394	746 aa		10.65	□□□□□ -0.71
DDR1-238	ENST00000446312	LFNG	Q8NES3	379 aa		10.65	□□□□□ -0.71
DDR1-238	ENST00000446312	PLPPR1	Q8TBJ4	325 aa		10.65	□□□□□ -0.71
DDR1-238	ENST00000446312	OR5P3	Q8WZ94	311 aa		10.65	□□□□□ -0.71
DDR1-238	ENST00000446312	ANGPTL4	Q9BY76	406 aa		10.65	□□□□□ -0.71
DDR1-238	ENST00000446312	NCKAP5	O14513	1909 aa		10.64	□□□□□ -0.71
DDR1-238	ENST00000446312	PLXNB1	O43157	2135 aa		10.64	□□□□□ -0.71
DDR1-238	ENST00000446312	ZNF737	O75373	536 aa		10.64	□□□□□ -0.71
DDR1-238	ENST00000446312	KLF7	O75840	302 aa	Predicted RBP	10.64	□□□□□ -0.71
DDR1-238	ENST00000446312	IGLV3-1	P01715	115 aa		10.64	□□□□□ -0.71
DDR1-238	ENST00000446312	PRB4	P10163	310 aa	Predicted RBP	10.64	□□□□□ -0.71
DDR1-238	ENST00000446312	CEACAM1	P13688	526 aa		10.64	□□□□□ -0.71
DDR1-238	ENST00000446312	TAS2R30	P59541	319 aa		10.64	□□□□□ -0.71
DDR1-238	ENST00000446312	BAX	Q07812	192 aa		10.64	□□□□□ -0.71
DDR1-238	ENST00000446312	SLC25A53	Q5H9E4	307 aa		10.64	□□□□□ -0.71
DDR1-238	ENST00000446312	LDLRAD2	Q5SZI1	272 aa		10.64	□□□□□ -0.71
DDR1-238	ENST00000446312	LYSMD4	Q5XG99	296 aa		10.64	□□□□□ -0.71
DDR1-238	ENST00000446312		Q6ZVH6	145 aa		10.64	□□□□□ -0.71
DDR1-238	ENST00000446312	TMEM105	Q8N8V8	129 aa		10.64	□□□□□ -0.71
DDR1-238	ENST00000446312	TNFRSF14	Q92956	283 aa		10.64	□□□□□ -0.71
DDR1-238	ENST00000446312	CLDN23	Q96B33	292 aa		10.64	□□□□□ -0.71
DDR1-238	ENST00000446312	DCTN5	Q9BTE1	182 aa		10.64	□□□□□ -0.71
DDR1-238	ENST00000446312	IGLV3-12	A0A075B6K2	115 aa		10.64	□□□□□ -0.71
DDR1-238	ENST00000446312	CDIPT	O14735	213 aa		10.64	□□□□□ -0.71
DDR1-238	ENST00000446312	GZMH	P20718	246 aa		10.64	□□□□□ -0.71
DDR1-238	ENST00000446312	F2R	P25116	425 aa		10.64	□□□□□ -0.71
DDR1-238	ENST00000446312	RAC3	P60763	192 aa		10.64	□□□□□ -0.71
DDR1-238	ENST00000446312		Q0VFX4	171 aa		10.64	□□□□□ -0.71
DDR1-238	ENST00000446312	FAM90A2P	Q658T7	463 aa		10.64	□□□□□ -0.71
DDR1-238	ENST00000446312	TOMM20L	Q6UXN7	152 aa		10.64	□□□□□ -0.71
DDR1-238	ENST00000446312	HAPLN4	Q86UW8	402 aa		10.64	□□□□□ -0.71
DDR1-238	ENST00000446312	OR4X1	Q8NH49	305 aa		10.64	□□□□□ -0.71
DDR1-238	ENST00000446312	CSTL1	Q9H114	145 aa		10.64	□□□□□ -0.71
DDR1-238	ENST00000446312	TCFL5	Q9UL49	500 aa		10.64	□□□□□ -0.71
DDR1-238	ENST00000446312	SPTAN1	Q13813	2472 aa	Known RBP	10.64	□□□□□ -0.71
DDR1-238	ENST00000446312	CLEC18A	A5D8T8	446 aa		10.63	□□□□□ -0.71
DDR1-238	ENST00000446312	WNT9B	O14905	357 aa		10.63	□□□□□ -0.71
DDR1-238	ENST00000446312	DEGS1	O15121	323 aa		10.63	□□□□□ -0.71
DDR1-238	ENST00000446312	CDS2	O95674	445 aa		10.63	□□□□□ -0.71
DDR1-238	ENST00000446312	IGKV1-39	P01597	117 aa		10.63	□□□□□ -0.71
DDR1-238	ENST00000446312	IGKV1D-39	P04432	117 aa		10.63	□□□□□ -0.71
DDR1-238	ENST00000446312	CELA3B	P08861	270 aa		10.63	□□□□□ -0.71
DDR1-238	ENST00000446312	ECI1	P42126	302 aa		10.63	□□□□□ -0.71
DDR1-238	ENST00000446312	THBS3	P49746	956 aa		10.63	□□□□□ -0.71
DDR1-238	ENST00000446312	C1orf194	Q5T5A4	169 aa		10.63	□□□□□ -0.71
DDR1-238	ENST00000446312	TCF23	Q7RTU1	214 aa		10.63	□□□□□ -0.71
DDR1-238	ENST00000446312	CLEC18C	Q8NCF0	446 aa		10.63	□□□□□ -0.71
DDR1-238	ENST00000446312	OR13D1	Q8NGV5	346 aa		10.63	□□□□□ -0.71
DDR1-238	ENST00000446312	CIB3	Q96Q77	187 aa	Predicted RBP	10.63	□□□□□ -0.71
DDR1-238	ENST00000446312	DEFB127	Q9H1M4	99 aa		10.63	□□□□□ -0.71
DDR1-238	ENST00000446312	PATZ1	Q9HBE1	687 aa	Known RBP	10.63	□□□□□ -0.71
DDR1-238	ENST00000446312	GRIFIN	A4D1Z8	144 aa		10.63	□□□□□ -0.71
DDR1-238	ENST00000446312	ZNF716	A6NP11	495 aa		10.63	□□□□□ -0.71
DDR1-238	ENST00000446312		F6UZH7	168 aa		10.63	□□□□□ -0.71
DDR1-238	ENST00000446312	SYNGR2	O43760	224 aa		10.63	□□□□□ -0.71
DDR1-238	ENST00000446312	PAGE4	O60829	102 aa		10.63	□□□□□ -0.71
DDR1-238	ENST00000446312	IL6R	P08887	468 aa	Predicted RBP	10.63	□□□□□ -0.71
DDR1-238	ENST00000446312	EPHA8	P29322	1005 aa	Predicted RBP	10.63	□□□□□ -0.71
DDR1-238	ENST00000446312	FOLR3	P41439	243 aa		10.63	□□□□□ -0.71
DDR1-238	ENST00000446312	MAGEA5	P43359	124 aa		10.63	□□□□□ -0.71
DDR1-238	ENST00000446312	RIPPLY3	P57055	190 aa		10.63	□□□□□ -0.71
DDR1-238	ENST00000446312	TFF3	Q07654	80 aa		10.63	□□□□□ -0.71
DDR1-238	ENST00000446312	VKORC1L1	Q8N0U8	176 aa		10.63	□□□□□ -0.71

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