RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 DOK1Q99704 481 aa2.84□□□□□ -1.95
HMGB1P48-201ENST00000446155 MARVELD1Q9BSK0 173 aa2.84□□□□□ -1.95
HMGB1P48-201ENST00000446155 THTPAQ9BU02 230 aa2.84□□□□□ -1.95
HMGB1P48-201ENST00000446155 MS4A8Q9BY19 250 aa2.84□□□□□ -1.95
HMGB1P48-201ENST00000446155 ZNF717Q9BY31 904 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P48-201ENST00000446155 PLA2G2FQ9BZM2 168 aa2.84□□□□□ -1.95
HMGB1P48-201ENST00000446155 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P48-201ENST00000446155 ZNF223Q9UK11 482 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P48-201ENST00000446155 DKKL1Q9UK85 242 aa2.84□□□□□ -1.95
HMGB1P48-201ENST00000446155 TBX21Q9UL17 535 aa2.84□□□□□ -1.95
HMGB1P48-201ENST00000446155 POLR1DQ9Y2S0 133 aa2.84□□□□□ -1.95
HMGB1P48-201ENST00000446155 CFAP54Q96N23 3096 aa2.84□□□□□ -1.96
HMGB1P48-201ENST00000446155 PIK3C2AO00443 1686 aa2.83□□□□□ -1.96
HMGB1P48-201ENST00000446155 C4BP0C0L5 1744 aa2.83□□□□□ -1.96
HMGB1P48-201ENST00000446155 TOGARAM1Q9Y4F4 1720 aa2.83□□□□□ -1.96
HMGB1P48-201ENST00000446155 IGHV1-3A0A0C4DH29 117 aa2.83□□□□□ -1.96
HMGB1P48-201ENST00000446155 CENPVL3A0A0U1RRI6 287 aa2.83□□□□□ -1.96
HMGB1P48-201ENST00000446155 PINLYPA6NC86 204 aa2.83□□□□□ -1.96
HMGB1P48-201ENST00000446155 EVPLLA8MZ36 301 aa2.83□□□□□ -1.96
HMGB1P48-201ENST00000446155 KPNA3O00505 521 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P48-201ENST00000446155 ISLRO14498 428 aa2.83□□□□□ -1.96
HMGB1P48-201ENST00000446155 RBFOX2O43251 390 aaKnown RBP eCLIP2.83□□□□□ -1.96
HMGB1P48-201ENST00000446155 HBZP02008 142 aa2.83□□□□□ -1.96
HMGB1P48-201ENST00000446155 ATP5G1P05496 136 aa2.83□□□□□ -1.96
HMGB1P48-201ENST00000446155 IL1RNP18510 177 aa2.83□□□□□ -1.96
HMGB1P48-201ENST00000446155 GADD45AP24522 165 aa2.83□□□□□ -1.96
HMGB1P48-201ENST00000446155 CCR7P32248 378 aa2.83□□□□□ -1.96
HMGB1P48-201ENST00000446155 ZNF83P51522 516 aa2.83□□□□□ -1.96
HMGB1P48-201ENST00000446155 ARF6P62330 175 aa2.83□□□□□ -1.96
HMGB1P48-201ENST00000446155 ELF3P78545 371 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P48-201ENST00000446155 HPCAP84074 193 aa2.83□□□□□ -1.96
HMGB1P48-201ENST00000446155 OR2F1Q13607 317 aa2.83□□□□□ -1.96
HMGB1P48-201ENST00000446155 HIST3H3Q16695 136 aa2.83□□□□□ -1.96
HMGB1P48-201ENST00000446155 MESTQ5EB52 335 aa2.83□□□□□ -1.96
HMGB1P48-201ENST00000446155 SPIN3Q5JUX0 258 aa2.83□□□□□ -1.96
HMGB1P48-201ENST00000446155 MARCH3Q86UD3 253 aa2.83□□□□□ -1.96
HMGB1P48-201ENST00000446155 NAA40Q86UY6 237 aa2.83□□□□□ -1.96
HMGB1P48-201ENST00000446155 SLC35G3Q8N808 338 aa2.83□□□□□ -1.96
HMGB1P48-201ENST00000446155 TMEM161BQ8NDZ6 487 aa2.83□□□□□ -1.96
HMGB1P48-201ENST00000446155 OR10G2Q8NGC3 310 aa2.83□□□□□ -1.96
HMGB1P48-201ENST00000446155 ZNRF2Q8NHG8 242 aa2.83□□□□□ -1.96
HMGB1P48-201ENST00000446155 EEF1AKMT1Q8WVE0 214 aa2.83□□□□□ -1.96
HMGB1P48-201ENST00000446155 ASB17Q8WXJ9 295 aa2.83□□□□□ -1.96
HMGB1P48-201ENST00000446155 SLC25A46Q96AG3 418 aa2.83□□□□□ -1.96
HMGB1P48-201ENST00000446155 IMP4Q96G21 291 aaKnown RBP2.83□□□□□ -1.96
HMGB1P48-201ENST00000446155 VCX3BQ9H321 246 aa2.83□□□□□ -1.96
HMGB1P48-201ENST00000446155 OR51I1Q9H343 314 aa2.83□□□□□ -1.96
HMGB1P48-201ENST00000446155 ZSCAN16Q9H4T2 348 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P48-201ENST00000446155 ATPIF1Q9UII2 106 aa2.83□□□□□ -1.96
HMGB1P48-201ENST00000446155 YTHDF2Q9Y5A9 579 aaKnown RBP2.83□□□□□ -1.96
HMGB1P48-201ENST00000446155 SLC22A7Q9Y694 548 aa2.83□□□□□ -1.96
HMGB1P48-201ENST00000446155 TTC21AQ8NDW8 1320 aa2.83□□□□□ -1.96
HMGB1P48-201ENST00000446155 ADAMTSL1Q8N6G6 1762 aa2.82□□□□□ -1.96
HMGB1P48-201ENST00000446155 SPTBN4Q9H254 2564 aa2.82□□□□□ -1.96
HMGB1P48-201ENST00000446155 FLNBO75369 2602 aaKnown RBP2.82□□□□□ -1.96
HMGB1P48-201ENST00000446155 TGIF2-C20orf24A0A0A6YYL0 155 aa2.82□□□□□ -1.96
HMGB1P48-201ENST00000446155 K7EPK0 472 aa2.82□□□□□ -1.96
HMGB1P48-201ENST00000446155 ADRA2AP08913 450 aa2.82□□□□□ -1.96
HMGB1P48-201ENST00000446155 GTF2F2P13984 249 aa2.82□□□□□ -1.96
HMGB1P48-201ENST00000446155 SULT1A1P50225 295 aa2.82□□□□□ -1.96
HMGB1P48-201ENST00000446155 OR4D2P58180 307 aa2.82□□□□□ -1.96
HMGB1P48-201ENST00000446155 B2MP61769 119 aa2.82□□□□□ -1.96
HMGB1P48-201ENST00000446155 IHHQ14623 411 aa2.82□□□□□ -1.96
HMGB1P48-201ENST00000446155 RSU1Q15404 277 aa2.82□□□□□ -1.96
HMGB1P48-201ENST00000446155 OR10K2Q6IF99 312 aa2.82□□□□□ -1.96
HMGB1P48-201ENST00000446155 IGFL2Q6UWQ7 119 aa2.82□□□□□ -1.96
HMGB1P48-201ENST00000446155 Q6ZR03 302 aa2.82□□□□□ -1.96
HMGB1P48-201ENST00000446155 DPPA2Q7Z7J5 298 aa2.82□□□□□ -1.96
HMGB1P48-201ENST00000446155 SLC51BQ86UW2 128 aa2.82□□□□□ -1.96
HMGB1P48-201ENST00000446155 NIT1Q86X76 327 aa2.82□□□□□ -1.96
HMGB1P48-201ENST00000446155 STX12Q86Y82 276 aa2.82□□□□□ -1.96
HMGB1P48-201ENST00000446155 DOLPP1Q86YN1 238 aa2.82□□□□□ -1.96
HMGB1P48-201ENST00000446155 MKXQ8IYA7 352 aa2.82□□□□□ -1.96
HMGB1P48-201ENST00000446155 OR8A1Q8NGG7 326 aa2.82□□□□□ -1.96
HMGB1P48-201ENST00000446155 OR52N1Q8NH53 320 aa2.82□□□□□ -1.96
HMGB1P48-201ENST00000446155 MFSD8Q8NHS3 518 aa2.82□□□□□ -1.96
HMGB1P48-201ENST00000446155 GPR82Q96P67 336 aa2.82□□□□□ -1.96
HMGB1P48-201ENST00000446155 OPN4Q9UHM6 478 aa2.82□□□□□ -1.96
HMGB1P48-201ENST00000446155 SAMHD1Q9Y3Z3 626 aaKnown RBP2.82□□□□□ -1.96
HMGB1P48-201ENST00000446155 LSM5Q9Y4Y9 91 aaKnown RBP2.82□□□□□ -1.96
HMGB1P48-201ENST00000446155 C4AP0C0L4 1744 aa2.82□□□□□ -1.96
HMGB1P48-201ENST00000446155 PPLO60437 1756 aa2.82□□□□□ -1.96
HMGB1P48-201ENST00000446155 CACNA1BQ00975 2339 aa2.81□□□□□ -1.96
HMGB1P48-201ENST00000446155 ZDBF2Q9HCK1 2354 aa2.81□□□□□ -1.96
HMGB1P48-201ENST00000446155 IGHV1-45A0A0A0MS14 117 aa2.81□□□□□ -1.96
HMGB1P48-201ENST00000446155 COPEO14579 308 aa2.81□□□□□ -1.96
HMGB1P48-201ENST00000446155 REG1AP05451 166 aa2.81□□□□□ -1.96
HMGB1P48-201ENST00000446155 CRYBA1P05813 215 aa2.81□□□□□ -1.96
HMGB1P48-201ENST00000446155 OR4A8P0C604 315 aa2.81□□□□□ -1.96
HMGB1P48-201ENST00000446155 CD28P10747 220 aa2.81□□□□□ -1.96
HMGB1P48-201ENST00000446155 CTSEP14091 401 aa2.81□□□□□ -1.96
HMGB1P48-201ENST00000446155 ZNF708P17019 499 aa2.81□□□□□ -1.96
HMGB1P48-201ENST00000446155 MDKP21741 143 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P48-201ENST00000446155 MPIP34949 423 aa2.81□□□□□ -1.96
HMGB1P48-201ENST00000446155 REG1BP48304 166 aa2.81□□□□□ -1.96
HMGB1P48-201ENST00000446155 INPP1P49441 399 aa2.81□□□□□ -1.96
HMGB1P48-201ENST00000446155 GDI2P50395 445 aaKnown RBP2.81□□□□□ -1.96
HMGB1P48-201ENST00000446155 NUDT2P50583 147 aa2.81□□□□□ -1.96
HMGB1P48-201ENST00000446155 NAA20P61599 178 aa2.81□□□□□ -1.96
HMGB1P48-201ENST00000446155 BTN1A1Q13410 526 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 236.6 ms