RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 OVOL1O14753 267 aa16.31■□□□□ 0.2
VSX1-206ENST00000444511 RGS10O43665 173 aa16.31■□□□□ 0.2
VSX1-206ENST00000444511 SOX15O60248 233 aa16.31■□□□□ 0.2
VSX1-206ENST00000444511 SCTP09683 121 aa16.31■□□□□ 0.2
VSX1-206ENST00000444511 PSMA1P25786 263 aaKnown RBP16.31■□□□□ 0.2
VSX1-206ENST00000444511 VEGFCP49767 419 aa16.31■□□□□ 0.2
VSX1-206ENST00000444511 AQP4P55087 323 aa16.31■□□□□ 0.2
VSX1-206ENST00000444511 C19orf54Q5BKX5 351 aa16.31■□□□□ 0.2
VSX1-206ENST00000444511 CASTOR1Q8WTX7 329 aa16.31■□□□□ 0.2
VSX1-206ENST00000444511 DCUN1D4Q92564 292 aa16.31■□□□□ 0.2
VSX1-206ENST00000444511 RNF5Q99942 180 aa16.31■□□□□ 0.2
VSX1-206ENST00000444511 ALX4Q9H161 411 aaPredicted RBP16.31■□□□□ 0.2
VSX1-206ENST00000444511 Q9N2K0 584 aa16.31■□□□□ 0.2
VSX1-206ENST00000444511 ISYNA1Q9NPH2 558 aa16.31■□□□□ 0.2
VSX1-206ENST00000444511 NKX1-2Q9UD57 310 aaPredicted RBP16.31■□□□□ 0.2
VSX1-206ENST00000444511 CPEP16870 476 aa16.3■□□□□ 0.2
VSX1-206ENST00000444511 ZNF429Q86V71 674 aa16.3■□□□□ 0.2
VSX1-206ENST00000444511 PPP1R27Q86WC6 154 aa16.3■□□□□ 0.2
VSX1-206ENST00000444511 DRAXINQ8NBI3 349 aaPredicted RBP16.3■□□□□ 0.2
VSX1-206ENST00000444511 ARHGAP5-AS1Q96IT6 56 aa16.3■□□□□ 0.2
VSX1-206ENST00000444511 CLCC1Q96S66 551 aa16.3■□□□□ 0.2
VSX1-206ENST00000444511 CMSS1Q9BQ75 279 aaKnown RBP16.3■□□□□ 0.2
VSX1-206ENST00000444511 PECRQ9BY49 303 aa16.3■□□□□ 0.2
VSX1-206ENST00000444511 CCDC90BQ9GZT6 254 aa16.3■□□□□ 0.2
VSX1-206ENST00000444511 DUSP21Q9H596 190 aa16.3■□□□□ 0.2
VSX1-206ENST00000444511 METTL1Q9UBP6 276 aaKnown RBP16.3■□□□□ 0.2
VSX1-206ENST00000444511 ZNF221Q9UK13 617 aa16.3■□□□□ 0.2
VSX1-206ENST00000444511 NUBP2Q9Y5Y2 271 aa16.3■□□□□ 0.2
VSX1-206ENST00000444511 FOXI3A8MTJ6 420 aaPredicted RBP16.29■□□□□ 0.2
VSX1-206ENST00000444511 LINC01619G3V211 115 aa16.29■□□□□ 0.2
VSX1-206ENST00000444511 LGALS1P09382 135 aaKnown RBP16.29■□□□□ 0.2
VSX1-206ENST00000444511 EGR2P11161 476 aaPredicted RBP16.29■□□□□ 0.2
VSX1-206ENST00000444511 CALRP27797 417 aaKnown RBP16.29■□□□□ 0.2
VSX1-206ENST00000444511 TMEM50BP56557 158 aa16.29■□□□□ 0.2
VSX1-206ENST00000444511 CLDN12P56749 244 aa16.29■□□□□ 0.2
VSX1-206ENST00000444511 MLLT11Q13015 90 aaPredicted RBP16.29■□□□□ 0.2
VSX1-206ENST00000444511 ACTBL2Q562R1 376 aa16.29■□□□□ 0.2
VSX1-206ENST00000444511 PYHIN1Q6K0P9 492 aa16.29■□□□□ 0.2
VSX1-206ENST00000444511 CD200R1LQ6Q8B3 271 aa16.29■□□□□ 0.2
VSX1-206ENST00000444511 UNQ5815/PRO19632Q6UWF5 114 aa16.29■□□□□ 0.2
VSX1-206ENST00000444511 OR56B1Q8NGI3 324 aa16.29■□□□□ 0.2
VSX1-206ENST00000444511 PTX4Q96A99 478 aa16.29■□□□□ 0.2
VSX1-206ENST00000444511 ASCL2Q99929 193 aa16.29■□□□□ 0.2
VSX1-206ENST00000444511 FAM103A1Q9BTL3 118 aaKnown RBP16.29■□□□□ 0.2
VSX1-206ENST00000444511 TOLLIPQ9H0E2 274 aa16.29■□□□□ 0.2
VSX1-206ENST00000444511 GAB2Q9UQC2 676 aa16.29■□□□□ 0.2
VSX1-206ENST00000444511 SAP30O75446 220 aa16.28■□□□□ 0.2
VSX1-206ENST00000444511 CD40LGP29965 261 aa16.28■□□□□ 0.2
VSX1-206ENST00000444511 RANBP1P43487 201 aa16.28■□□□□ 0.2
VSX1-206ENST00000444511 SLURP1P55000 103 aa16.28■□□□□ 0.2
VSX1-206ENST00000444511 RPS16P62249 146 aaKnown RBP16.28■□□□□ 0.2
VSX1-206ENST00000444511 PSG5Q15238 335 aa16.28■□□□□ 0.2
VSX1-206ENST00000444511 DLX4Q92988 240 aaPredicted RBP16.28■□□□□ 0.2
VSX1-206ENST00000444511 FAM3DQ96BQ1 224 aa16.28■□□□□ 0.2
VSX1-206ENST00000444511 TSNAXQ99598 290 aaKnown RBP16.28■□□□□ 0.2
VSX1-206ENST00000444511 SMAD5-AS1Q9Y6J3 95 aa16.28■□□□□ 0.2
VSX1-206ENST00000444511 KMT2CQ8NEZ4 4911 aaKnown RBP16.28■□□□□ 0.2
VSX1-206ENST00000444511 NBEAL2Q6ZNJ1 2754 aa16.27■□□□□ 0.2
VSX1-206ENST00000444511 TRDCB7Z8K6 153 aa16.27■□□□□ 0.2
VSX1-206ENST00000444511 DENRO43583 198 aaKnown RBP16.27■□□□□ 0.2
VSX1-206ENST00000444511 APOA2P02652 100 aa16.27■□□□□ 0.2
VSX1-206ENST00000444511 TFAP2AP05549 437 aa16.27■□□□□ 0.2
VSX1-206ENST00000444511 MRPS15P82914 257 aaKnown RBP16.27■□□□□ 0.2
VSX1-206ENST00000444511 C2orf76Q3KRA6 126 aa16.27■□□□□ 0.2
VSX1-206ENST00000444511 AKIRIN2Q53H80 203 aa16.27■□□□□ 0.2
VSX1-206ENST00000444511 ZNF562Q6V9R5 426 aa16.27■□□□□ 0.2
VSX1-206ENST00000444511 NRG4Q8WWG1 115 aa16.27■□□□□ 0.2
VSX1-206ENST00000444511 MS4A10Q96PG2 267 aa16.27■□□□□ 0.2
VSX1-206ENST00000444511 RDH8Q9NYR8 311 aa16.27■□□□□ 0.2
VSX1-206ENST00000444511 V9GY05 133 aa16.27■□□□□ 0.2
VSX1-206ENST00000444511 TENM3Q9P273 2699 aa16.27■□□□□ 0.19
VSX1-206ENST00000444511 IGHV4OR15-8A0A075B7B6 117 aa16.26■□□□□ 0.19
VSX1-206ENST00000444511 A0A087WW49 117 aa16.26■□□□□ 0.19
VSX1-206ENST00000444511 IGKV1-6A0A0C4DH72 117 aa16.26■□□□□ 0.19
VSX1-206ENST00000444511 PROP1O75360 226 aa16.26■□□□□ 0.19
VSX1-206ENST00000444511 SPDEFO95238 335 aa16.26■□□□□ 0.19
VSX1-206ENST00000444511 CA2P00918 260 aa16.26■□□□□ 0.19
VSX1-206ENST00000444511 IGHV3-11P01762 117 aa16.26■□□□□ 0.19
VSX1-206ENST00000444511 IGKV1-16P04430 117 aa16.26■□□□□ 0.19
VSX1-206ENST00000444511 PSMD7P51665 324 aa16.26■□□□□ 0.19
VSX1-206ENST00000444511 TPPP2P59282 170 aa16.26■□□□□ 0.19
VSX1-206ENST00000444511 FABP5Q01469 135 aa16.26■□□□□ 0.19
VSX1-206ENST00000444511 PLAC9Q5JTB6 97 aa16.26■□□□□ 0.19
VSX1-206ENST00000444511 PRSS48Q7RTY5 328 aa16.26■□□□□ 0.19
VSX1-206ENST00000444511 PDPNQ86YL7 162 aa16.26■□□□□ 0.19
VSX1-206ENST00000444511 ZNF383Q8NA42 475 aa16.26■□□□□ 0.19
VSX1-206ENST00000444511 LFNGQ8NES3 379 aa16.26■□□□□ 0.19
VSX1-206ENST00000444511 MGLLQ99685 303 aa16.26■□□□□ 0.19
VSX1-206ENST00000444511 ACOT13Q9NPJ3 140 aa16.26■□□□□ 0.19
VSX1-206ENST00000444511 M0R1X1 148 aa16.25■□□□□ 0.19
VSX1-206ENST00000444511 CD3GP09693 182 aa16.25■□□□□ 0.19
VSX1-206ENST00000444511 CRHBPP24387 322 aa16.25■□□□□ 0.19
VSX1-206ENST00000444511 MAP2K4P45985 399 aa16.25■□□□□ 0.19
VSX1-206ENST00000444511 SERPINB10P48595 397 aa16.25■□□□□ 0.19
VSX1-206ENST00000444511 LINC00205P59089 165 aa16.25■□□□□ 0.19
VSX1-206ENST00000444511 HES5Q5TA89 166 aa16.25■□□□□ 0.19
VSX1-206ENST00000444511 OR4A4PQ8NGN8 299 aa16.25■□□□□ 0.19
VSX1-206ENST00000444511 ARPC1AQ92747 370 aa16.25■□□□□ 0.19
VSX1-206ENST00000444511 FLYWCH2Q96CP2 140 aaKnown RBP16.25■□□□□ 0.19
VSX1-206ENST00000444511 SLA2Q9H6Q3 261 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms