RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 CXorf66Q5JRM2 361 aaPredicted RBP16.55■□□□□ 0.24
CDKN3-204ENST00000442975 KPRPQ5T749 579 aaPredicted RBP16.55■□□□□ 0.24
CDKN3-204ENST00000442975 OR10J5Q8NHC4 309 aa16.55■□□□□ 0.24
CDKN3-204ENST00000442975 CABLES2Q9BTV7 478 aa16.55■□□□□ 0.24
CDKN3-204ENST00000442975 GHITMQ9H3K2 345 aa16.55■□□□□ 0.24
CDKN3-204ENST00000442975 M0R1X1 148 aa16.54■□□□□ 0.24
CDKN3-204ENST00000442975 HLA-DRB1P01911 266 aa16.54■□□□□ 0.24
CDKN3-204ENST00000442975 GINS4Q9BRT9 223 aa16.54■□□□□ 0.24
CDKN3-204ENST00000442975 ZFP57Q9NU63 452 aa16.54■□□□□ 0.24
CDKN3-204ENST00000442975 ELF5Q9UKW6 265 aaPredicted RBP16.54■□□□□ 0.24
CDKN3-204ENST00000442975 WSB1Q9Y6I7 421 aa16.54■□□□□ 0.24
CDKN3-204ENST00000442975 NOTCH3Q9UM47 2321 aa16.54■□□□□ 0.24
CDKN3-204ENST00000442975 ATP6V0E1O15342 81 aa16.53■□□□□ 0.24
CDKN3-204ENST00000442975 IGF1P05019 195 aa16.53■□□□□ 0.24
CDKN3-204ENST00000442975 OR8U9P0C7N5 309 aa16.53■□□□□ 0.24
CDKN3-204ENST00000442975 OR5H8P0DN80 308 aa16.53■□□□□ 0.24
CDKN3-204ENST00000442975 MC5RP33032 325 aa16.53■□□□□ 0.24
CDKN3-204ENST00000442975 FOXE3Q13461 319 aa16.53■□□□□ 0.24
CDKN3-204ENST00000442975 ARL6IP1Q15041 203 aa16.53■□□□□ 0.24
CDKN3-204ENST00000442975 ETV3LQ6ZN32 361 aa16.53■□□□□ 0.24
CDKN3-204ENST00000442975 ZNF695Q8IW36 515 aa16.53■□□□□ 0.24
CDKN3-204ENST00000442975 OR8U1Q8NH10 309 aa16.53■□□□□ 0.24
CDKN3-204ENST00000442975 CENPOQ9BU64 300 aa16.53■□□□□ 0.24
CDKN3-204ENST00000442975 OR2D2Q9H210 308 aa16.53■□□□□ 0.24
CDKN3-204ENST00000442975 FBXL15Q9H469 300 aa16.53■□□□□ 0.24
CDKN3-204ENST00000442975 VCX3AQ9NNX9 186 aa16.53■□□□□ 0.24
CDKN3-204ENST00000442975 TRBV6-7A0A0A0MS04 114 aa16.52■□□□□ 0.24
CDKN3-204ENST00000442975 APOA2P02652 100 aa16.52■□□□□ 0.24
CDKN3-204ENST00000442975 TFAP2AP05549 437 aa16.52■□□□□ 0.24
CDKN3-204ENST00000442975 CFHR3Q02985 330 aa16.52■□□□□ 0.24
CDKN3-204ENST00000442975 CDNFQ49AH0 187 aa16.52■□□□□ 0.24
CDKN3-204ENST00000442975 IDNKQ5T6J7 187 aa16.52■□□□□ 0.24
CDKN3-204ENST00000442975 LIN54Q6MZP7 749 aa16.52■□□□□ 0.24
CDKN3-204ENST00000442975 LINC00482Q8N8I6 264 aa16.52■□□□□ 0.24
CDKN3-204ENST00000442975 WFDC9Q8NEX5 89 aa16.52■□□□□ 0.24
CDKN3-204ENST00000442975 NPBQ8NG41 125 aa16.52■□□□□ 0.24
CDKN3-204ENST00000442975 OR5AN1Q8NGI8 311 aa16.52■□□□□ 0.24
CDKN3-204ENST00000442975 ABHD5Q8WTS1 349 aa16.52■□□□□ 0.24
CDKN3-204ENST00000442975 NUDCD2Q8WVJ2 157 aa16.52■□□□□ 0.24
CDKN3-204ENST00000442975 DUX3Q96PT4 197 aa16.52■□□□□ 0.24
CDKN3-204ENST00000442975 OR51J1Q9H342 316 aa16.52■□□□□ 0.24
CDKN3-204ENST00000442975 RHBDL2Q9NX52 303 aa16.52■□□□□ 0.24
CDKN3-204ENST00000442975 RBM7Q9Y580 266 aaKnown RBP16.52■□□□□ 0.24
CDKN3-204ENST00000442975 IGHV7-81A0A0B4J1V7 117 aa16.51■□□□□ 0.23
CDKN3-204ENST00000442975 TMEM235A6NFC5 223 aa16.51■□□□□ 0.23
CDKN3-204ENST00000442975 RRHO14718 337 aa16.51■□□□□ 0.23
CDKN3-204ENST00000442975 RBBP9O75884 186 aa16.51■□□□□ 0.23
CDKN3-204ENST00000442975 SCGNO76038 276 aa16.51■□□□□ 0.23
CDKN3-204ENST00000442975 NDUFA3O95167 84 aa16.51■□□□□ 0.23
CDKN3-204ENST00000442975 ELANEP08246 267 aa16.51■□□□□ 0.23
CDKN3-204ENST00000442975 DTYMKP23919 212 aa16.51■□□□□ 0.23
CDKN3-204ENST00000442975 RAB25P57735 213 aa16.51■□□□□ 0.23
CDKN3-204ENST00000442975 LINC00205P59089 165 aa16.51■□□□□ 0.23
CDKN3-204ENST00000442975 MRPL41Q8IXM3 137 aaKnown RBP16.51■□□□□ 0.23
CDKN3-204ENST00000442975 ZNF383Q8NA42 475 aa16.51■□□□□ 0.23
CDKN3-204ENST00000442975 A3GALT2U3KPV4 340 aa16.51■□□□□ 0.23
CDKN3-204ENST00000442975 IGKV1D-8A0A087WSZ0 117 aa16.5■□□□□ 0.23
CDKN3-204ENST00000442975 G3V318 75 aa16.5■□□□□ 0.23
CDKN3-204ENST00000442975 TNFAIP8O95379 198 aa16.5■□□□□ 0.23
CDKN3-204ENST00000442975 IGHG4P01861 327 aa16.5■□□□□ 0.23
CDKN3-204ENST00000442975 SLC6A1P30531 599 aa16.5■□□□□ 0.23
CDKN3-204ENST00000442975 THBS3P49746 956 aa16.5■□□□□ 0.23
CDKN3-204ENST00000442975 GNG2P59768 71 aa16.5■□□□□ 0.23
CDKN3-204ENST00000442975 NDPQ00604 133 aa16.5■□□□□ 0.23
CDKN3-204ENST00000442975 ECSCRQ19T08 205 aa16.5■□□□□ 0.23
CDKN3-204ENST00000442975 DEFB136Q30KP8 78 aa16.5■□□□□ 0.23
CDKN3-204ENST00000442975 TIMM50Q3ZCQ8 353 aa16.5■□□□□ 0.23
CDKN3-204ENST00000442975 HACD4Q5VWC8 232 aa16.5■□□□□ 0.23
CDKN3-204ENST00000442975 TSPAN14Q8NG11 270 aa16.5■□□□□ 0.23
CDKN3-204ENST00000442975 RCC1LQ96I51 464 aaKnown RBP16.5■□□□□ 0.23
CDKN3-204ENST00000442975 ST6GALNAC5Q9BVH7 336 aa16.5■□□□□ 0.23
CDKN3-204ENST00000442975 NECAP2Q9NVZ3 263 aa16.5■□□□□ 0.23
CDKN3-204ENST00000442975 ZNF580Q9UK33 172 aa16.5■□□□□ 0.23
CDKN3-204ENST00000442975 A0A087WXM4 84 aa16.49■□□□□ 0.23
CDKN3-204ENST00000442975 TRAV41A0A0B4J266 112 aa16.49■□□□□ 0.23
CDKN3-204ENST00000442975 PROP1O75360 226 aa16.49■□□□□ 0.23
CDKN3-204ENST00000442975 DIRAS3O95661 229 aa16.49■□□□□ 0.23
CDKN3-204ENST00000442975 IGKV1-16P04430 117 aa16.49■□□□□ 0.23
CDKN3-204ENST00000442975 FOXB2Q5VYV0 432 aa16.49■□□□□ 0.23
CDKN3-204ENST00000442975 PDPNQ86YL7 162 aa16.49■□□□□ 0.23
CDKN3-204ENST00000442975 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.49■□□□□ 0.23
CDKN3-204ENST00000442975 CLCC1Q96S66 551 aa16.49■□□□□ 0.23
CDKN3-204ENST00000442975 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.49■□□□□ 0.23
CDKN3-204ENST00000442975 SLC35D1Q9NTN3 355 aa16.49■□□□□ 0.23
CDKN3-204ENST00000442975 METTL1Q9UBP6 276 aaKnown RBP16.49■□□□□ 0.23
CDKN3-204ENST00000442975 ETV7Q9Y603 341 aa16.49■□□□□ 0.23
CDKN3-204ENST00000442975 MYCNOSP40205 109 aa16.48■□□□□ 0.23
CDKN3-204ENST00000442975 RPS16P62249 146 aaKnown RBP16.48■□□□□ 0.23
CDKN3-204ENST00000442975 TMEM65Q6PI78 240 aa16.48■□□□□ 0.23
CDKN3-204ENST00000442975 OR5H6Q8NGV6 325 aa16.48■□□□□ 0.23
CDKN3-204ENST00000442975 RAX2Q96IS3 184 aa16.48■□□□□ 0.23
CDKN3-204ENST00000442975 TSNAXQ99598 290 aaKnown RBP16.48■□□□□ 0.23
CDKN3-204ENST00000442975 TOLLIPQ9H0E2 274 aa16.48■□□□□ 0.23
CDKN3-204ENST00000442975 SDHAF2Q9NX18 166 aa16.48■□□□□ 0.23
CDKN3-204ENST00000442975 DNAH3Q8TD57 4116 aa16.47■□□□□ 0.23
CDKN3-204ENST00000442975 J3QRK9 145 aa16.47■□□□□ 0.23
CDKN3-204ENST00000442975 PLXNB1O43157 2135 aa16.47■□□□□ 0.23
CDKN3-204ENST00000442975 PSMB8P28062 276 aa16.47■□□□□ 0.23
CDKN3-204ENST00000442975 TGFBR1P36897 503 aa16.47■□□□□ 0.23
CDKN3-204ENST00000442975 LSM3P62310 102 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms