RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 KRTAP10-3P60369 221 aa11.95□□□□□ -0.5
CSNK1E-210ENST00000442216 KLHDC1Q8N7A1 406 aa11.95□□□□□ -0.5
CSNK1E-210ENST00000442216 GVQW1Q8N7I0 195 aa11.95□□□□□ -0.5
CSNK1E-210ENST00000442216 Q8N9W7 124 aa11.95□□□□□ -0.5
CSNK1E-210ENST00000442216 OR8U1Q8NH10 309 aa11.95□□□□□ -0.5
CSNK1E-210ENST00000442216 DYNC2LI1Q8TCX1 351 aa11.95□□□□□ -0.5
CSNK1E-210ENST00000442216 ISOC1Q96CN7 298 aa11.95□□□□□ -0.5
CSNK1E-210ENST00000442216 RNF5Q99942 180 aa11.95□□□□□ -0.5
CSNK1E-210ENST00000442216 OR2D2Q9H210 308 aa11.95□□□□□ -0.5
CSNK1E-210ENST00000442216 SCPEP1Q9HB40 452 aa11.95□□□□□ -0.5
CSNK1E-210ENST00000442216 ADAM30Q9UKF2 790 aa11.95□□□□□ -0.5
CSNK1E-210ENST00000442216 ANAPC10Q9UM13 185 aa11.95□□□□□ -0.5
CSNK1E-210ENST00000442216 OR2W1Q9Y3N9 320 aa11.95□□□□□ -0.5
CSNK1E-210ENST00000442216 RBM7Q9Y580 266 aaKnown RBP11.95□□□□□ -0.5
CSNK1E-210ENST00000442216 NCBP2LA6PVI3 153 aaKnown RBP11.94□□□□□ -0.5
CSNK1E-210ENST00000442216 FAM25AB3EWG3 89 aa11.94□□□□□ -0.5
CSNK1E-210ENST00000442216 FAM25CB3EWG5 89 aa11.94□□□□□ -0.5
CSNK1E-210ENST00000442216 FAM25GB3EWG6 89 aa11.94□□□□□ -0.5
CSNK1E-210ENST00000442216 H0YJW9 148 aa11.94□□□□□ -0.5
CSNK1E-210ENST00000442216 H3BMQ9 156 aa11.94□□□□□ -0.5
CSNK1E-210ENST00000442216 SULT1C2O00338 296 aa11.94□□□□□ -0.5
CSNK1E-210ENST00000442216 PEX14O75381 377 aa11.94□□□□□ -0.5
CSNK1E-210ENST00000442216 PTHLHP12272 177 aa11.94□□□□□ -0.5
CSNK1E-210ENST00000442216 NAT1P18440 290 aa11.94□□□□□ -0.5
CSNK1E-210ENST00000442216 TAGLNQ01995 201 aaKnown RBP11.94□□□□□ -0.5
CSNK1E-210ENST00000442216 FAM71E2Q8N5Q1 922 aa11.94□□□□□ -0.5
CSNK1E-210ENST00000442216 OR5AP2Q8NGF4 316 aa11.94□□□□□ -0.5
CSNK1E-210ENST00000442216 WIPF2Q8TF74 440 aaPredicted RBP11.94□□□□□ -0.5
CSNK1E-210ENST00000442216 C15orf40Q8WUR7 153 aa11.94□□□□□ -0.5
CSNK1E-210ENST00000442216 IFT46Q9NQC8 304 aa11.94□□□□□ -0.5
CSNK1E-210ENST00000442216 NECAP2Q9NVZ3 263 aa11.94□□□□□ -0.5
CSNK1E-210ENST00000442216 SDHAF2Q9NX18 166 aa11.94□□□□□ -0.5
CSNK1E-210ENST00000442216 WASHC3Q9Y3C0 194 aa11.94□□□□□ -0.5
CSNK1E-210ENST00000442216 CEPT1Q9Y6K0 416 aa11.94□□□□□ -0.5
CSNK1E-210ENST00000442216 TUSC2O75896 110 aa11.93□□□□□ -0.5
CSNK1E-210ENST00000442216 IGHG2P01859 326 aa11.93□□□□□ -0.5
CSNK1E-210ENST00000442216 VSIG10L2P0DP72 767 aa11.93□□□□□ -0.5
CSNK1E-210ENST00000442216 LUMP51884 338 aaPredicted RBP11.93□□□□□ -0.5
CSNK1E-210ENST00000442216 F2RL1P55085 397 aa11.93□□□□□ -0.5
CSNK1E-210ENST00000442216 ACTBP60709 375 aa11.93□□□□□ -0.5
CSNK1E-210ENST00000442216 SRSF4Q08170 494 aaKnown RBP11.93□□□□□ -0.5
CSNK1E-210ENST00000442216 FAM131AQ6UXB0 335 aa11.93□□□□□ -0.5
CSNK1E-210ENST00000442216 NPBQ8NG41 125 aa11.93□□□□□ -0.5
CSNK1E-210ENST00000442216 GPX8Q8TED1 209 aa11.93□□□□□ -0.5
CSNK1E-210ENST00000442216 SNAPC3Q92966 411 aa11.93□□□□□ -0.5
CSNK1E-210ENST00000442216 ADTRPQ96IZ2 230 aa11.93□□□□□ -0.5
CSNK1E-210ENST00000442216 RASL11BQ9BPW5 248 aa11.93□□□□□ -0.5
CSNK1E-210ENST00000442216 ZNF701M0R085 212 aaPredicted RBP11.92□□□□□ -0.5
CSNK1E-210ENST00000442216 M0R1X1 148 aa11.92□□□□□ -0.5
CSNK1E-210ENST00000442216 NBR2O15453 112 aa11.92□□□□□ -0.5
CSNK1E-210ENST00000442216 KCNAB3O43448 404 aa11.92□□□□□ -0.5
CSNK1E-210ENST00000442216 NDUFA3O95167 84 aa11.92□□□□□ -0.5
CSNK1E-210ENST00000442216 APOA2P02652 100 aa11.92□□□□□ -0.5
CSNK1E-210ENST00000442216 NFYAP23511 347 aaPredicted RBP11.92□□□□□ -0.5
CSNK1E-210ENST00000442216 CDK10Q15131 360 aa11.92□□□□□ -0.5
CSNK1E-210ENST00000442216 MMDQ15546 238 aa11.92□□□□□ -0.5
CSNK1E-210ENST00000442216 C9orf152Q5JTZ5 239 aa11.92□□□□□ -0.5
CSNK1E-210ENST00000442216 PDPNQ86YL7 162 aa11.92□□□□□ -0.5
CSNK1E-210ENST00000442216 ZNF645Q8N7E2 425 aa11.92□□□□□ -0.5
CSNK1E-210ENST00000442216 ZNF383Q8NA42 475 aa11.92□□□□□ -0.5
CSNK1E-210ENST00000442216 RABL2AQ9UBK7 228 aaPredicted RBP11.92□□□□□ -0.5
CSNK1E-210ENST00000442216 RABL2BQ9UNT1 228 aa11.92□□□□□ -0.5
CSNK1E-210ENST00000442216 MRPS7Q9Y2R9 242 aaKnown RBP11.92□□□□□ -0.5
CSNK1E-210ENST00000442216 MEIS3P1A6NDR6 274 aa11.91□□□□□ -0.5
CSNK1E-210ENST00000442216 H7C2Y5 167 aa11.91□□□□□ -0.5
CSNK1E-210ENST00000442216 OR5H8P0DN80 308 aa11.91□□□□□ -0.5
CSNK1E-210ENST00000442216 RRASP10301 218 aa11.91□□□□□ -0.5
CSNK1E-210ENST00000442216 THBS3P49746 956 aa11.91□□□□□ -0.5
CSNK1E-210ENST00000442216 TAS2R46P59540 309 aa11.91□□□□□ -0.5
CSNK1E-210ENST00000442216 MSMO1Q15800 293 aa11.91□□□□□ -0.5
CSNK1E-210ENST00000442216 TMEM95Q3KNT9 176 aa11.91□□□□□ -0.5
CSNK1E-210ENST00000442216 GLDNQ6ZMI3 551 aaPredicted RBP11.91□□□□□ -0.5
CSNK1E-210ENST00000442216 SLC35E3Q7Z769 313 aa11.91□□□□□ -0.5
CSNK1E-210ENST00000442216 FOXRED2Q8IWF2 684 aa11.91□□□□□ -0.5
CSNK1E-210ENST00000442216 CHPT1Q8WUD6 406 aa11.91□□□□□ -0.5
CSNK1E-210ENST00000442216 GIMAP1Q8WWP7 306 aa11.91□□□□□ -0.5
CSNK1E-210ENST00000442216 KIAA1456Q9P272 454 aa11.91□□□□□ -0.5
CSNK1E-210ENST00000442216 EXTL2Q9UBQ6 330 aa11.91□□□□□ -0.5
CSNK1E-210ENST00000442216 SH2D7A6NKC9 451 aaPredicted RBP11.9□□□□□ -0.5
CSNK1E-210ENST00000442216 RGS5O15539 181 aa11.9□□□□□ -0.5
CSNK1E-210ENST00000442216 FBXO24O75426 580 aa11.9□□□□□ -0.5
CSNK1E-210ENST00000442216 FCGR2CP31995 323 aa11.9□□□□□ -0.5
CSNK1E-210ENST00000442216 PRR31Q5SQ13 230 aa11.9□□□□□ -0.5
CSNK1E-210ENST00000442216 OVCH2Q7RTZ1 564 aa11.9□□□□□ -0.5
CSNK1E-210ENST00000442216 CENPVQ7Z7K6 275 aaPredicted RBP11.9□□□□□ -0.5
CSNK1E-210ENST00000442216 DRAXINQ8NBI3 349 aaPredicted RBP11.9□□□□□ -0.5
CSNK1E-210ENST00000442216 C5orf30Q96GV9 206 aa11.9□□□□□ -0.5
CSNK1E-210ENST00000442216 RITA1Q96K30 269 aa11.9□□□□□ -0.5
CSNK1E-210ENST00000442216 RBM38Q9H0Z9 239 aaKnown RBP11.9□□□□□ -0.5
CSNK1E-210ENST00000442216 MIXL1Q9H2W2 232 aa11.9□□□□□ -0.5
CSNK1E-210ENST00000442216 SLC35D1Q9NTN3 355 aa11.9□□□□□ -0.5
CSNK1E-210ENST00000442216 ZNF580Q9UK33 172 aa11.9□□□□□ -0.5
CSNK1E-210ENST00000442216 IGKV1D-13A0A0B4J2D9 117 aa11.89□□□□□ -0.51
CSNK1E-210ENST00000442216 M0QZ24 198 aa11.89□□□□□ -0.51
CSNK1E-210ENST00000442216 AP4M1O00189 453 aa11.89□□□□□ -0.51
CSNK1E-210ENST00000442216 CTDSP2O14595 271 aa11.89□□□□□ -0.51
CSNK1E-210ENST00000442216 SPDEFO95238 335 aa11.89□□□□□ -0.51
CSNK1E-210ENST00000442216 PPYP01298 95 aa11.89□□□□□ -0.51
CSNK1E-210ENST00000442216 HLA-DRB1P01911 266 aa11.89□□□□□ -0.51
CSNK1E-210ENST00000442216 IGKV1-13P0DP09 117 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms