RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 FAHD2BQ6P2I3 314 aaPredicted RBP6.79□□□□□ -1.32
CCDC39-201ENST00000442201 DHRS11Q6UWP2 260 aa6.79□□□□□ -1.32
CCDC39-201ENST00000442201 SUMF2Q8NBJ7 301 aa6.79□□□□□ -1.32
CCDC39-201ENST00000442201 OR5H2Q8NGV7 314 aa6.79□□□□□ -1.32
CCDC39-201ENST00000442201 DYRK2Q92630 601 aa6.79□□□□□ -1.32
CCDC39-201ENST00000442201 RDH5Q92781 318 aa6.79□□□□□ -1.32
CCDC39-201ENST00000442201 ISOC2Q96AB3 205 aa6.79□□□□□ -1.32
CCDC39-201ENST00000442201 FAHD2AQ96GK7 314 aa6.79□□□□□ -1.32
CCDC39-201ENST00000442201 HIST1H2BLQ99880 126 aa6.79□□□□□ -1.32
CCDC39-201ENST00000442201 PRRT1Q99946 306 aa6.79□□□□□ -1.32
CCDC39-201ENST00000442201 TMEM231Q9H6L2 316 aa6.79□□□□□ -1.32
CCDC39-201ENST00000442201 PLCE1Q9P212 2302 aa6.79□□□□□ -1.32
CCDC39-201ENST00000442201 HIVEP3Q5T1R4 2406 aa6.79□□□□□ -1.32
CCDC39-201ENST00000442201 TRAV24A0A0B4J272 114 aa6.79□□□□□ -1.32
CCDC39-201ENST00000442201 PLAUP00749 431 aa6.79□□□□□ -1.32
CCDC39-201ENST00000442201 GCGP01275 180 aa6.79□□□□□ -1.32
CCDC39-201ENST00000442201 RLN1P04808 185 aa6.79□□□□□ -1.32
CCDC39-201ENST00000442201 VSIG10L2P0DP72 767 aa6.79□□□□□ -1.32
CCDC39-201ENST00000442201 VAMP2P63027 116 aa6.79□□□□□ -1.32
CCDC39-201ENST00000442201 VAX1Q5SQQ9 334 aa6.79□□□□□ -1.32
CCDC39-201ENST00000442201 Q6P435 159 aa6.79□□□□□ -1.32
CCDC39-201ENST00000442201 ACP7Q6ZNF0 438 aa6.79□□□□□ -1.32
CCDC39-201ENST00000442201 FAM24BQ8N5W8 94 aa6.79□□□□□ -1.32
CCDC39-201ENST00000442201 ERGIC1Q969X5 290 aa6.79□□□□□ -1.32
CCDC39-201ENST00000442201 NUDT11Q96G61 164 aa6.79□□□□□ -1.32
CCDC39-201ENST00000442201 SLC6A7Q99884 636 aa6.79□□□□□ -1.32
CCDC39-201ENST00000442201 MS4A5Q9H3V2 200 aa6.79□□□□□ -1.32
CCDC39-201ENST00000442201 DYNLRB1Q9NP97 96 aa6.79□□□□□ -1.32
CCDC39-201ENST00000442201 SRRM5B3KS81 715 aa6.79□□□□□ -1.32
CCDC39-201ENST00000442201 B9A039 149 aa6.79□□□□□ -1.32
CCDC39-201ENST00000442201 GOSR1O95249 250 aa6.79□□□□□ -1.32
CCDC39-201ENST00000442201 OR2H2O95918 312 aa6.79□□□□□ -1.32
CCDC39-201ENST00000442201 HAND1O96004 215 aa6.79□□□□□ -1.32
CCDC39-201ENST00000442201 KNG1P01042 644 aa6.79□□□□□ -1.32
CCDC39-201ENST00000442201 ZNF735P0CB33 412 aa6.79□□□□□ -1.32
CCDC39-201ENST00000442201 IRF2P14316 349 aa6.79□□□□□ -1.32
CCDC39-201ENST00000442201 HLA-GP17693 338 aa6.79□□□□□ -1.32
CCDC39-201ENST00000442201 TNFRSF1AP19438 455 aa6.79□□□□□ -1.32
CCDC39-201ENST00000442201 SULT1A1P50225 295 aa6.79□□□□□ -1.32
CCDC39-201ENST00000442201 EFNB3Q15768 340 aa6.79□□□□□ -1.32
CCDC39-201ENST00000442201 EIF5AL1Q6IS14 154 aaKnown RBP6.79□□□□□ -1.32
CCDC39-201ENST00000442201 ACOT7LQ6ZUV0 252 aa6.79□□□□□ -1.32
CCDC39-201ENST00000442201 KCTD9Q7L273 389 aa6.79□□□□□ -1.32
CCDC39-201ENST00000442201 OR5AP2Q8NGF4 316 aa6.79□□□□□ -1.32
CCDC39-201ENST00000442201 SLC25A21Q9BQT8 299 aaPredicted RBP6.79□□□□□ -1.32
CCDC39-201ENST00000442201 SLC25A31Q9H0C2 315 aa6.79□□□□□ -1.32
CCDC39-201ENST00000442201 DNAJC4Q9NNZ3 241 aa6.79□□□□□ -1.32
CCDC39-201ENST00000442201 SLC2A8Q9NY64 477 aa6.79□□□□□ -1.32
CCDC39-201ENST00000442201 ANXA10Q9UJ72 324 aa6.79□□□□□ -1.32
CCDC39-201ENST00000442201 SMCO3A2RU48 225 aa6.78□□□□□ -1.32
CCDC39-201ENST00000442201 SIRPB1O00241 398 aa6.78□□□□□ -1.32
CCDC39-201ENST00000442201 TGOLN2O43493 480 aa6.78□□□□□ -1.32
CCDC39-201ENST00000442201 CD55P08174 381 aa6.78□□□□□ -1.32
CCDC39-201ENST00000442201 CCL8P80075 99 aa6.78□□□□□ -1.32
CCDC39-201ENST00000442201 SPRNQ5BIV9 151 aa6.78□□□□□ -1.32
CCDC39-201ENST00000442201 GFI1BQ5VTD9 330 aa6.78□□□□□ -1.32
CCDC39-201ENST00000442201 ZNF843Q8N446 348 aa6.78□□□□□ -1.32
CCDC39-201ENST00000442201 OR11L1Q8NGX0 322 aa6.78□□□□□ -1.32
CCDC39-201ENST00000442201 TMEM204Q9BSN7 226 aa6.78□□□□□ -1.32
CCDC39-201ENST00000442201 ZNF286AQ9HBT8 521 aa6.78□□□□□ -1.32
CCDC39-201ENST00000442201 SCAF4O95104 1147 aaKnown RBP6.78□□□□□ -1.32
CCDC39-201ENST00000442201 DVL1P1P54792 670 aaPredicted RBP6.78□□□□□ -1.32
CCDC39-201ENST00000442201 TESK1Q15569 626 aa6.78□□□□□ -1.32
CCDC39-201ENST00000442201 ZNF672Q499Z4 452 aaPredicted RBP6.78□□□□□ -1.32
CCDC39-201ENST00000442201 LY6G6FQ5SQ64 297 aa6.78□□□□□ -1.32
CCDC39-201ENST00000442201 FAM90A1Q86YD7 464 aa6.78□□□□□ -1.32
CCDC39-201ENST00000442201 GCSAMQ8N6F7 178 aa6.78□□□□□ -1.32
CCDC39-201ENST00000442201 OR2D3Q8NGH3 330 aa6.78□□□□□ -1.32
CCDC39-201ENST00000442201 RCC1LQ96I51 464 aaKnown RBP6.78□□□□□ -1.32
CCDC39-201ENST00000442201 ZNF471Q9BX82 626 aaPredicted RBP6.78□□□□□ -1.32
CCDC39-201ENST00000442201 GCM1Q9NP62 436 aa6.78□□□□□ -1.32
CCDC39-201ENST00000442201 EHFQ9NZC4 300 aa6.78□□□□□ -1.32
CCDC39-201ENST00000442201 RNF7Q9UBF6 113 aa6.78□□□□□ -1.32
CCDC39-201ENST00000442201 LPAR3Q9UBY5 353 aa6.78□□□□□ -1.32
CCDC39-201ENST00000442201 PPP1R3CQ9UQK1 317 aa6.78□□□□□ -1.32
CCDC39-201ENST00000442201 ROS1P08922 2347 aa6.77□□□□□ -1.33
CCDC39-201ENST00000442201 IGKV1D-8A0A087WSZ0 117 aa6.77□□□□□ -1.33
CCDC39-201ENST00000442201 C9JQL5 133 aa6.77□□□□□ -1.33
CCDC39-201ENST00000442201 SLC33A1O00400 549 aaPredicted RBP6.77□□□□□ -1.33
CCDC39-201ENST00000442201 NAPSAO96009 420 aa6.77□□□□□ -1.33
CCDC39-201ENST00000442201 OR5AC1P0C628 307 aa6.77□□□□□ -1.33
CCDC39-201ENST00000442201 FABP4P15090 132 aa6.77□□□□□ -1.33
CCDC39-201ENST00000442201 LOXP28300 417 aaPredicted RBP6.77□□□□□ -1.33
CCDC39-201ENST00000442201 MDH2P40926 338 aaKnown RBP6.77□□□□□ -1.33
CCDC39-201ENST00000442201 ATP6V1FQ16864 119 aa6.77□□□□□ -1.33
CCDC39-201ENST00000442201 AKR1C8PQ5T2L2 129 aa6.77□□□□□ -1.33
CCDC39-201ENST00000442201 FOXRED2Q8IWF2 684 aa6.77□□□□□ -1.33
CCDC39-201ENST00000442201 ZCCHC24Q8N2G6 241 aaKnown RBP6.77□□□□□ -1.33
CCDC39-201ENST00000442201 MUC15Q8N387 334 aa6.77□□□□□ -1.33
CCDC39-201ENST00000442201 LYPD6BQ8NI32 183 aa6.77□□□□□ -1.33
CCDC39-201ENST00000442201 DECR2Q9NUI1 292 aa6.77□□□□□ -1.33
CCDC39-201ENST00000442201 PYCARD-AS1I3L0S3 204 aa6.77□□□□□ -1.33
CCDC39-201ENST00000442201 IFNL4K9M1U5 179 aa6.77□□□□□ -1.33
CCDC39-201ENST00000442201 GOSR2O14653 212 aa6.77□□□□□ -1.33
CCDC39-201ENST00000442201 EGR1P18146 543 aa6.77□□□□□ -1.33
CCDC39-201ENST00000442201 LMO1P25800 156 aa6.77□□□□□ -1.33
CCDC39-201ENST00000442201 TAGLN2P37802 199 aaKnown RBP6.77□□□□□ -1.33
CCDC39-201ENST00000442201 HOXA4Q00056 320 aaPredicted RBP6.77□□□□□ -1.33
CCDC39-201ENST00000442201 HERPUD1Q15011 391 aa6.77□□□□□ -1.33
CCDC39-201ENST00000442201 C1orf194Q5T5A4 169 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms