RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 TUBA4BQ9H853 241 aa7.66□□□□□ -1.18
SYN3-204ENST00000441821 KIAA1456Q9P272 454 aa7.66□□□□□ -1.18
SYN3-204ENST00000441821 GHRLQ9UBU3 117 aa7.66□□□□□ -1.18
SYN3-204ENST00000441821 ETV7Q9Y603 341 aa7.66□□□□□ -1.18
SYN3-204ENST00000441821 IGHV7-81A0A0B4J1V7 117 aa7.65□□□□□ -1.18
SYN3-204ENST00000441821 TRAV39A0A0B4J263 110 aa7.65□□□□□ -1.18
SYN3-204ENST00000441821 A0A1W2PPK0 400 aa7.65□□□□□ -1.18
SYN3-204ENST00000441821 IFITM5A6NNB3 132 aa7.65□□□□□ -1.18
SYN3-204ENST00000441821 C15orf65H3BRN8 121 aa7.65□□□□□ -1.18
SYN3-204ENST00000441821 AIPO00170 330 aa7.65□□□□□ -1.18
SYN3-204ENST00000441821 LY6G6CO95867 125 aa7.65□□□□□ -1.18
SYN3-204ENST00000441821 TMEM225BP0DP42 221 aa7.65□□□□□ -1.18
SYN3-204ENST00000441821 RPS11P62280 158 aaKnown RBP eCLIP7.65□□□□□ -1.18
SYN3-204ENST00000441821 GPR176Q14439 515 aa7.65□□□□□ -1.18
SYN3-204ENST00000441821 IL13RA2Q14627 380 aa7.65□□□□□ -1.18
SYN3-204ENST00000441821 ZNF846Q147U1 533 aa7.65□□□□□ -1.18
SYN3-204ENST00000441821 MMDQ15546 238 aa7.65□□□□□ -1.18
SYN3-204ENST00000441821 RAB11BQ15907 218 aa7.65□□□□□ -1.18
SYN3-204ENST00000441821 Q3ZCU0 254 aa7.65□□□□□ -1.18
SYN3-204ENST00000441821 SLC25A48Q6ZT89 311 aaKnown RBP7.65□□□□□ -1.18
SYN3-204ENST00000441821 OR6M1Q8NGM8 313 aa7.65□□□□□ -1.18
SYN3-204ENST00000441821 OR13C5Q8NGS8 318 aa7.65□□□□□ -1.18
SYN3-204ENST00000441821 RBMXL1Q96E39 390 aaKnown RBP7.65□□□□□ -1.18
SYN3-204ENST00000441821 CST11Q9H112 138 aa7.65□□□□□ -1.18
SYN3-204ENST00000441821 RETNQ9HD89 108 aa7.65□□□□□ -1.18
SYN3-204ENST00000441821 PARP11Q9NR21 331 aa7.65□□□□□ -1.18
SYN3-204ENST00000441821 GFOD1Q9NXC2 390 aa7.65□□□□□ -1.18
SYN3-204ENST00000441821 DAPK2Q9UIK4 370 aa7.65□□□□□ -1.18
SYN3-204ENST00000441821 METTL21EPA6NDL7 271 aa7.64□□□□□ -1.19
SYN3-204ENST00000441821 FAM25AB3EWG3 89 aa7.64□□□□□ -1.19
SYN3-204ENST00000441821 FAM25CB3EWG5 89 aa7.64□□□□□ -1.19
SYN3-204ENST00000441821 FAM25GB3EWG6 89 aa7.64□□□□□ -1.19
SYN3-204ENST00000441821 SDCBPO00560 298 aaPredicted RBP7.64□□□□□ -1.19
SYN3-204ENST00000441821 SOX15O60248 233 aa7.64□□□□□ -1.19
SYN3-204ENST00000441821 ZNF780AO75290 641 aaPredicted RBP7.64□□□□□ -1.19
SYN3-204ENST00000441821 BPNT1O95861 308 aa7.64□□□□□ -1.19
SYN3-204ENST00000441821 HTR2CP28335 458 aa7.64□□□□□ -1.19
SYN3-204ENST00000441821 BLVRBP30043 206 aaPredicted RBP7.64□□□□□ -1.19
SYN3-204ENST00000441821 ZNF93P35789 620 aaPredicted RBP7.64□□□□□ -1.19
SYN3-204ENST00000441821 CRIP2P52943 208 aaPredicted RBP7.64□□□□□ -1.19
SYN3-204ENST00000441821 LSAMPQ13449 338 aa7.64□□□□□ -1.19
SYN3-204ENST00000441821 ARL6IP1Q15041 203 aa7.64□□□□□ -1.19
SYN3-204ENST00000441821 KISS1Q15726 138 aa7.64□□□□□ -1.19
SYN3-204ENST00000441821 C19orf54Q5BKX5 351 aa7.64□□□□□ -1.19
SYN3-204ENST00000441821 LINC00322Q6ZN03 302 aaPredicted RBP7.64□□□□□ -1.19
SYN3-204ENST00000441821 OR13C9Q8NGT0 318 aa7.64□□□□□ -1.19
SYN3-204ENST00000441821 RGP1Q92546 391 aaPredicted RBP7.64□□□□□ -1.19
SYN3-204ENST00000441821 ARL11Q969Q4 196 aa7.64□□□□□ -1.19
SYN3-204ENST00000441821 THAP7Q9BT49 309 aaPredicted RBP7.64□□□□□ -1.19
SYN3-204ENST00000441821 RSRP1Q9BUV0 290 aa7.64□□□□□ -1.19
SYN3-204ENST00000441821 SLIRPQ9GZT3 109 aaKnown RBP7.64□□□□□ -1.19
SYN3-204ENST00000441821 DIABLOQ9NR28 239 aa7.64□□□□□ -1.19
SYN3-204ENST00000441821 TAS2R4Q9NYW5 299 aa7.64□□□□□ -1.19
SYN3-204ENST00000441821 STEAP1Q9UHE8 339 aa7.64□□□□□ -1.19
SYN3-204ENST00000441821 AK6Q9Y3D8 172 aaKnown RBP7.64□□□□□ -1.19
SYN3-204ENST00000441821 A0A1W2PN81 502 aa7.63□□□□□ -1.19
SYN3-204ENST00000441821 H0Y980 276 aa7.63□□□□□ -1.19
SYN3-204ENST00000441821 SLC17A2O00624 439 aa7.63□□□□□ -1.19
SYN3-204ENST00000441821 SLC31A2O15432 143 aa7.63□□□□□ -1.19
SYN3-204ENST00000441821 ORC5O43913 435 aa7.63□□□□□ -1.19
SYN3-204ENST00000441821 CHRNA7P36544 502 aa7.63□□□□□ -1.19
SYN3-204ENST00000441821 INPP1P49441 399 aa7.63□□□□□ -1.19
SYN3-204ENST00000441821 ACTBP60709 375 aa7.63□□□□□ -1.19
SYN3-204ENST00000441821 PYHIN1Q6K0P9 492 aa7.63□□□□□ -1.19
SYN3-204ENST00000441821 LIN54Q6MZP7 749 aa7.63□□□□□ -1.19
SYN3-204ENST00000441821 GTSCR1Q86UQ5 136 aa7.63□□□□□ -1.19
SYN3-204ENST00000441821 TCTEX1D1Q8N7M0 179 aa7.63□□□□□ -1.19
SYN3-204ENST00000441821 ZNF439Q8NDP4 499 aa7.63□□□□□ -1.19
SYN3-204ENST00000441821 PXT1Q8NFP0 134 aa7.63□□□□□ -1.19
SYN3-204ENST00000441821 OR51A4Q8NGJ6 313 aa7.63□□□□□ -1.19
SYN3-204ENST00000441821 S100A16Q96FQ6 103 aaKnown RBP7.63□□□□□ -1.19
SYN3-204ENST00000441821 FAM110AQ9BQ89 295 aa7.63□□□□□ -1.19
SYN3-204ENST00000441821 URM1Q9BTM9 101 aaKnown RBP7.63□□□□□ -1.19
SYN3-204ENST00000441821 DPCDQ9BVM2 203 aaPredicted RBP7.63□□□□□ -1.19
SYN3-204ENST00000441821 RNF167Q9H6Y7 350 aa7.63□□□□□ -1.19
SYN3-204ENST00000441821 COMMD3Q9UBI1 195 aa7.63□□□□□ -1.19
SYN3-204ENST00000441821 SPATA2Q9UM82 520 aa7.63□□□□□ -1.19
SYN3-204ENST00000441821 FOXA2Q9Y261 457 aaPredicted RBP7.63□□□□□ -1.19
SYN3-204ENST00000441821 IGHV3-43A0A0B4J1X8 118 aa7.62□□□□□ -1.19
SYN3-204ENST00000441821 TMEM30CPA0ZSE6 113 aa7.62□□□□□ -1.19
SYN3-204ENST00000441821 NBR2O15453 112 aa7.62□□□□□ -1.19
SYN3-204ENST00000441821 LANCL1O43813 399 aa7.62□□□□□ -1.19
SYN3-204ENST00000441821 RGS11O94810 467 aa7.62□□□□□ -1.19
SYN3-204ENST00000441821 TPPPO94811 219 aa7.62□□□□□ -1.19
SYN3-204ENST00000441821 IGHV3-11P01762 117 aa7.62□□□□□ -1.19
SYN3-204ENST00000441821 APOA1P02647 267 aa7.62□□□□□ -1.19
SYN3-204ENST00000441821 CSTBP04080 98 aaKnown RBP7.62□□□□□ -1.19
SYN3-204ENST00000441821 IGHV3-43DP0DP04 118 aa7.62□□□□□ -1.19
SYN3-204ENST00000441821 IGFBP3P17936 291 aaPredicted RBP7.62□□□□□ -1.19
SYN3-204ENST00000441821 PTBP1P26599 531 aaKnown RBP eCLIP7.62□□□□□ -1.192e-7■■■■■ 31.2
SYN3-204ENST00000441821 ZNF134P52741 427 aa7.62□□□□□ -1.19
SYN3-204ENST00000441821 INSL4Q14641 139 aa7.62□□□□□ -1.19
SYN3-204ENST00000441821 ECSCRQ19T08 205 aa7.62□□□□□ -1.19
SYN3-204ENST00000441821 C5orf64Q2M2E5 130 aa7.62□□□□□ -1.19
SYN3-204ENST00000441821 PIGYQ3MUY2 71 aa7.62□□□□□ -1.19
SYN3-204ENST00000441821 CT45A1Q5HYN5 189 aa7.62□□□□□ -1.19
SYN3-204ENST00000441821 UBE2NLQ5JXB2 153 aa7.62□□□□□ -1.19
SYN3-204ENST00000441821 STEAP3Q658P3 488 aa7.62□□□□□ -1.19
SYN3-204ENST00000441821 ZNF660Q6AZW8 331 aaPredicted RBP7.62□□□□□ -1.19
SYN3-204ENST00000441821 AWAT2Q6E213 333 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms