RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 RALYQ9UKM9 306 aaKnown RBP4.99□□□□□ -1.61
VPS50-205ENST00000441602 DVL1O14640 695 aa4.99□□□□□ -1.61
VPS50-205ENST00000441602 PPIHO43447 177 aaKnown RBP4.99□□□□□ -1.61
VPS50-205ENST00000441602 FCGR3BO75015 233 aa4.99□□□□□ -1.61
VPS50-205ENST00000441602 PITX3O75364 302 aa4.99□□□□□ -1.61
VPS50-205ENST00000441602 CFDP00746 253 aaPredicted RBP4.99□□□□□ -1.61
VPS50-205ENST00000441602 NQO2P16083 231 aa4.99□□□□□ -1.61
VPS50-205ENST00000441602 TMEM33P57088 247 aa4.99□□□□□ -1.61
VPS50-205ENST00000441602 EWSR1Q01844 656 aaKnown RBP eCLIP4.99□□□□□ -1.61
VPS50-205ENST00000441602 OR2B11Q5JQS5 317 aa4.99□□□□□ -1.61
VPS50-205ENST00000441602 FAM71F2Q6NXP2 309 aa4.99□□□□□ -1.61
VPS50-205ENST00000441602 BTNL3Q6UXE8 466 aa4.99□□□□□ -1.61
VPS50-205ENST00000441602 DTX2Q86UW9 622 aa4.99□□□□□ -1.61
VPS50-205ENST00000441602 FGFRL1Q8N441 504 aa4.99□□□□□ -1.61
VPS50-205ENST00000441602 SCGB1C1Q8TD33 95 aa4.99□□□□□ -1.61
VPS50-205ENST00000441602 MAGT1Q9H0U3 335 aa4.99□□□□□ -1.61
VPS50-205ENST00000441602 ENY2Q9NPA8 101 aa4.99□□□□□ -1.61
VPS50-205ENST00000441602 LYRM2Q9NU23 88 aaPredicted RBP4.99□□□□□ -1.61
VPS50-205ENST00000441602 PSENENQ9NZ42 101 aa4.99□□□□□ -1.61
VPS50-205ENST00000441602 AMMECR1Q9Y4X0 333 aaPredicted RBP4.99□□□□□ -1.61
VPS50-205ENST00000441602 CADP27708 2225 aa4.99□□□□□ -1.61
VPS50-205ENST00000441602 SHANK1Q9Y566 2161 aa4.98□□□□□ -1.61
VPS50-205ENST00000441602 CEBPZOSA8MTT3 80 aa4.98□□□□□ -1.61
VPS50-205ENST00000441602 KRASP01116 189 aa4.98□□□□□ -1.61
VPS50-205ENST00000441602 OMGP23515 440 aa4.98□□□□□ -1.61
VPS50-205ENST00000441602 DUTP33316 252 aaKnown RBP4.98□□□□□ -1.61
VPS50-205ENST00000441602 RAB5CP51148 216 aa4.98□□□□□ -1.61
VPS50-205ENST00000441602 PRRX1P54821 245 aa4.98□□□□□ -1.61
VPS50-205ENST00000441602 LOXL3P58215 753 aa4.98□□□□□ -1.61
VPS50-205ENST00000441602 TFF3Q07654 80 aa4.98□□□□□ -1.61
VPS50-205ENST00000441602 MIDNQ504T8 468 aa4.98□□□□□ -1.61
VPS50-205ENST00000441602 C8orf31Q8N9H6 132 aa4.98□□□□□ -1.61
VPS50-205ENST00000441602 OR10X1Q8NGY0 326 aa4.98□□□□□ -1.61
VPS50-205ENST00000441602 TNFRSF14Q92956 283 aa4.98□□□□□ -1.61
VPS50-205ENST00000441602 GNPNAT1Q96EK6 184 aaPredicted RBP4.98□□□□□ -1.61
VPS50-205ENST00000441602 SMIM8Q96KF7 97 aa4.98□□□□□ -1.61
VPS50-205ENST00000441602 CITED4Q96RK1 184 aa4.98□□□□□ -1.61
VPS50-205ENST00000441602 SMIM3Q9BZL3 60 aa4.98□□□□□ -1.61
VPS50-205ENST00000441602 UBTD1Q9HAC8 227 aa4.98□□□□□ -1.61
VPS50-205ENST00000441602 DCAF16Q9NXF7 216 aa4.98□□□□□ -1.61
VPS50-205ENST00000441602 STRAPQ9Y3F4 350 aaKnown RBP4.98□□□□□ -1.61
VPS50-205ENST00000441602 WSB1Q9Y6I7 421 aa4.98□□□□□ -1.61
VPS50-205ENST00000441602 PRR14LQ5THK1 2151 aa4.98□□□□□ -1.61
VPS50-205ENST00000441602 MSGN1A6NI15 193 aa4.98□□□□□ -1.61
VPS50-205ENST00000441602 C17orf98A8MV24 154 aa4.98□□□□□ -1.61
VPS50-205ENST00000441602 CHST1O43916 411 aa4.98□□□□□ -1.61
VPS50-205ENST00000441602 LOXP28300 417 aaPredicted RBP4.98□□□□□ -1.61
VPS50-205ENST00000441602 GNG10P50151 68 aa4.98□□□□□ -1.61
VPS50-205ENST00000441602 HOXA4Q00056 320 aaPredicted RBP4.98□□□□□ -1.61
VPS50-205ENST00000441602 ZNF585BQ52M93 769 aa4.98□□□□□ -1.61
VPS50-205ENST00000441602 CXorf66Q5JRM2 361 aaPredicted RBP4.98□□□□□ -1.61
VPS50-205ENST00000441602 UBAC2Q8NBM4 344 aa4.98□□□□□ -1.61
VPS50-205ENST00000441602 OR9G1Q8NH87 305 aa4.98□□□□□ -1.61
VPS50-205ENST00000441602 TMEM186Q96B77 213 aa4.98□□□□□ -1.61
VPS50-205ENST00000441602 SAT2Q96F10 170 aaPredicted RBP4.98□□□□□ -1.61
VPS50-205ENST00000441602 GPHA2Q96T91 129 aa4.98□□□□□ -1.61
VPS50-205ENST00000441602 IFI27L2Q9H2X8 130 aa4.98□□□□□ -1.61
VPS50-205ENST00000441602 CHODLQ9H9P2 273 aa4.98□□□□□ -1.61
VPS50-205ENST00000441602 C19orf12Q9NSK7 152 aa4.98□□□□□ -1.61
VPS50-205ENST00000441602 SLC35D1Q9NTN3 355 aa4.98□□□□□ -1.61
VPS50-205ENST00000441602 NUP50Q9UKX7 468 aa4.98□□□□□ -1.61
VPS50-205ENST00000441602 RPS10-NUDT3A0A1W2PQS6 291 aa4.98□□□□□ -1.61
VPS50-205ENST00000441602 FAM24AA6NFZ4 105 aa4.98□□□□□ -1.61
VPS50-205ENST00000441602 S1PR2O95136 353 aa4.98□□□□□ -1.61
VPS50-205ENST00000441602 IGKV1-5P01602 117 aa4.98□□□□□ -1.61
VPS50-205ENST00000441602 IGHV2-70P01814 119 aa4.98□□□□□ -1.61
VPS50-205ENST00000441602 RBP4P02753 201 aa4.98□□□□□ -1.61
VPS50-205ENST00000441602 GPR6P46095 362 aaPredicted RBP4.98□□□□□ -1.61
VPS50-205ENST00000441602 SULT1A1P50225 295 aa4.98□□□□□ -1.61
VPS50-205ENST00000441602 ERVFRD-1P60508 538 aa4.98□□□□□ -1.61
VPS50-205ENST00000441602 RAB2AP61019 212 aa4.98□□□□□ -1.61
VPS50-205ENST00000441602 ATP6V1FQ16864 119 aa4.98□□□□□ -1.61
VPS50-205ENST00000441602 RPL7L1Q6DKI1 246 aaKnown RBP4.98□□□□□ -1.61
VPS50-205ENST00000441602 SLC25A48Q6ZT89 311 aaKnown RBP4.98□□□□□ -1.61
VPS50-205ENST00000441602 MRPL41Q8IXM3 137 aaKnown RBP4.98□□□□□ -1.61
VPS50-205ENST00000441602 LINC00311Q8N616 119 aa4.98□□□□□ -1.61
VPS50-205ENST00000441602 TMEM252Q8N6L7 170 aa4.98□□□□□ -1.61
VPS50-205ENST00000441602 IGF2RP11717 2491 aa4.97□□□□□ -1.61
VPS50-205ENST00000441602 TEX46H3BTG2 121 aa4.97□□□□□ -1.61
VPS50-205ENST00000441602 IGLV2-14P01704 120 aa4.97□□□□□ -1.61
VPS50-205ENST00000441602 SEC11BP0C7V7 166 aa4.97□□□□□ -1.61
VPS50-205ENST00000441602 G6PCP35575 357 aa4.97□□□□□ -1.61
VPS50-205ENST00000441602 UQCRFS1P47985 274 aa4.97□□□□□ -1.61
VPS50-205ENST00000441602 RPL30P62888 115 aaKnown RBP4.97□□□□□ -1.61
VPS50-205ENST00000441602 EIF4EBP1Q13541 118 aaPredicted RBP4.97□□□□□ -1.61
VPS50-205ENST00000441602 LILRB2Q8N423 598 aa4.97□□□□□ -1.61
VPS50-205ENST00000441602 CHD3Q12873 2000 aaKnown RBP4.97□□□□□ -1.61
VPS50-205ENST00000441602 DNAH14Q0VDD8 3507 aa4.97□□□□□ -1.61
VPS50-205ENST00000441602 DYSFO75923 2080 aa4.97□□□□□ -1.61
VPS50-205ENST00000441602 MEX3AA1L020 520 aaKnown RBP4.97□□□□□ -1.61
VPS50-205ENST00000441602 TNFRSF13BO14836 293 aaPredicted RBP4.97□□□□□ -1.61
VPS50-205ENST00000441602 SIAH2O43255 324 aa4.97□□□□□ -1.61
VPS50-205ENST00000441602 IFNA17P01571 189 aa4.97□□□□□ -1.61
VPS50-205ENST00000441602 NMBP08949 121 aa4.97□□□□□ -1.61
VPS50-205ENST00000441602 RAB13P51153 203 aa4.97□□□□□ -1.61
VPS50-205ENST00000441602 CT45A1Q5HYN5 189 aa4.97□□□□□ -1.61
VPS50-205ENST00000441602 NCR3LG1Q68D85 454 aa4.97□□□□□ -1.61
VPS50-205ENST00000441602 TMEM200BQ69YZ2 307 aa4.97□□□□□ -1.61
VPS50-205ENST00000441602 CT45A3Q8NHU0 189 aa4.97□□□□□ -1.61
VPS50-205ENST00000441602 TMED6Q8WW62 240 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms