RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 FLYWCH2Q96CP2 140 aaKnown RBP16.03■□□□□ 0.16
CPNE1-219ENST00000440240 C11orf54Q9H0W9 315 aaPredicted RBP16.03■□□□□ 0.16
CPNE1-219ENST00000440240 VCXQ9H320 206 aa16.03■□□□□ 0.16
CPNE1-219ENST00000440240 CASQ2O14958 399 aaPredicted RBP16.02■□□□□ 0.16
CPNE1-219ENST00000440240 ARSBP15848 533 aa16.02■□□□□ 0.16
CPNE1-219ENST00000440240 SPNP16150 400 aa16.02■□□□□ 0.16
CPNE1-219ENST00000440240 ACSM6Q6P461 480 aa16.02■□□□□ 0.16
CPNE1-219ENST00000440240 UNQ5815/PRO19632Q6UWF5 114 aa16.02■□□□□ 0.16
CPNE1-219ENST00000440240 FAM89BQ8N5H3 189 aa16.02■□□□□ 0.16
CPNE1-219ENST00000440240 CASTOR1Q8WTX7 329 aa16.02■□□□□ 0.16
CPNE1-219ENST00000440240 TSNAXQ99598 290 aaKnown RBP16.02■□□□□ 0.16
CPNE1-219ENST00000440240 PARP12Q9H0J9 701 aaKnown RBP16.02■□□□□ 0.16
CPNE1-219ENST00000440240 LPAR5Q9H1C0 372 aa16.02■□□□□ 0.16
CPNE1-219ENST00000440240 SLA2Q9H6Q3 261 aa16.02■□□□□ 0.16
CPNE1-219ENST00000440240 SCN3BQ9NY72 215 aa16.02■□□□□ 0.16
CPNE1-219ENST00000440240 METTL1Q9UBP6 276 aaKnown RBP16.02■□□□□ 0.16
CPNE1-219ENST00000440240 AK3Q9UIJ7 227 aa16.02■□□□□ 0.16
CPNE1-219ENST00000440240 HSF4Q9ULV5 492 aa16.02■□□□□ 0.16
CPNE1-219ENST00000440240 IGHV4OR15-8A0A075B7B6 117 aa16.01■□□□□ 0.15
CPNE1-219ENST00000440240 A0A087WW49 117 aa16.01■□□□□ 0.15
CPNE1-219ENST00000440240 A0A0A6YYD4 124 aa16.01■□□□□ 0.15
CPNE1-219ENST00000440240 SOCS1O15524 211 aa16.01■□□□□ 0.15
CPNE1-219ENST00000440240 TFAP2AP05549 437 aa16.01■□□□□ 0.15
CPNE1-219ENST00000440240 OR8U9P0C7N5 309 aa16.01■□□□□ 0.15
CPNE1-219ENST00000440240 CPEP16870 476 aa16.01■□□□□ 0.15
CPNE1-219ENST00000440240 PSG5Q15238 335 aa16.01■□□□□ 0.15
CPNE1-219ENST00000440240 MED22Q15528 200 aa16.01■□□□□ 0.15
CPNE1-219ENST00000440240 SBSPONQ8IVN8 264 aa16.01■□□□□ 0.15
CPNE1-219ENST00000440240 PTX4Q96A99 478 aa16.01■□□□□ 0.15
CPNE1-219ENST00000440240 OR4C12Q96R67 309 aa16.01■□□□□ 0.15
CPNE1-219ENST00000440240 CLCC1Q96S66 551 aa16.01■□□□□ 0.15
CPNE1-219ENST00000440240 KCNK15Q9H427 330 aa16.01■□□□□ 0.15
CPNE1-219ENST00000440240 PLGRKTQ9HBL7 147 aa16.01■□□□□ 0.15
CPNE1-219ENST00000440240 ZNF221Q9UK13 617 aa16.01■□□□□ 0.15
CPNE1-219ENST00000440240 LSM2Q9Y333 95 aaKnown RBP16.01■□□□□ 0.15
CPNE1-219ENST00000440240 SPDEFO95238 335 aa16■□□□□ 0.15
CPNE1-219ENST00000440240 GP9P14770 177 aa16■□□□□ 0.15
CPNE1-219ENST00000440240 RANBP1P43487 201 aa16■□□□□ 0.15
CPNE1-219ENST00000440240 HLA-DRB3P79483 266 aa16■□□□□ 0.15
CPNE1-219ENST00000440240 LFNGQ8NES3 379 aa16■□□□□ 0.15
CPNE1-219ENST00000440240 ARPC1AQ92747 370 aa16■□□□□ 0.15
CPNE1-219ENST00000440240 UFD1Q92890 307 aa16■□□□□ 0.15
CPNE1-219ENST00000440240 RHOVQ96L33 236 aa16■□□□□ 0.15
CPNE1-219ENST00000440240 MS4A10Q96PG2 267 aa16■□□□□ 0.15
CPNE1-219ENST00000440240 FAM103A1Q9BTL3 118 aaKnown RBP16■□□□□ 0.15
CPNE1-219ENST00000440240 Q9N2K0 584 aa16■□□□□ 0.15
CPNE1-219ENST00000440240 C12orf4Q9NQ89 552 aa16■□□□□ 0.15
CPNE1-219ENST00000440240 OR1A1Q9P1Q5 309 aa16■□□□□ 0.15
CPNE1-219ENST00000440240 SLC17A2O00624 439 aa15.99■□□□□ 0.15
CPNE1-219ENST00000440240 PROP1O75360 226 aa15.99■□□□□ 0.15
CPNE1-219ENST00000440240 IGHV3-11P01762 117 aa15.99■□□□□ 0.15
CPNE1-219ENST00000440240 SCTP09683 121 aa15.99■□□□□ 0.15
CPNE1-219ENST00000440240 TPPP2P59282 170 aa15.99■□□□□ 0.15
CPNE1-219ENST00000440240 RPS16P62249 146 aaKnown RBP15.99■□□□□ 0.15
CPNE1-219ENST00000440240 PITPNAQ00169 270 aa15.99■□□□□ 0.15
CPNE1-219ENST00000440240 LIPKQ5VXJ0 399 aa15.99■□□□□ 0.15
CPNE1-219ENST00000440240 DRAXINQ8NBI3 349 aaPredicted RBP15.99■□□□□ 0.15
CPNE1-219ENST00000440240 TMEM203Q969S6 136 aa15.99■□□□□ 0.15
CPNE1-219ENST00000440240 RCHY1Q96PM5 261 aa15.99■□□□□ 0.15
CPNE1-219ENST00000440240 HDHD3Q9BSH5 251 aaPredicted RBP15.99■□□□□ 0.15
CPNE1-219ENST00000440240 GAB2Q9UQC2 676 aa15.99■□□□□ 0.15
CPNE1-219ENST00000440240 HUWE1Q7Z6Z7 4374 aaKnown RBP15.99■□□□□ 0.15
CPNE1-219ENST00000440240 ARL6IP5O75915 188 aa15.98■□□□□ 0.15
CPNE1-219ENST00000440240 CA2P00918 260 aa15.98■□□□□ 0.15
CPNE1-219ENST00000440240 TMEM50BP56557 158 aa15.98■□□□□ 0.15
CPNE1-219ENST00000440240 P2RY14Q15391 338 aa15.98■□□□□ 0.15
CPNE1-219ENST00000440240 TRAM1Q15629 374 aa15.98■□□□□ 0.15
CPNE1-219ENST00000440240 PDPNQ86YL7 162 aa15.98■□□□□ 0.15
CPNE1-219ENST00000440240 MUC7Q8TAX7 377 aa15.98■□□□□ 0.15
CPNE1-219ENST00000440240 ELOVL1Q9BW60 279 aa15.98■□□□□ 0.15
CPNE1-219ENST00000440240 FOXI3A8MTJ6 420 aaPredicted RBP15.97■□□□□ 0.15
CPNE1-219ENST00000440240 APOA2P02652 100 aa15.97■□□□□ 0.15
CPNE1-219ENST00000440240 TRGV3P03979 118 aa15.97■□□□□ 0.15
CPNE1-219ENST00000440240 IGKV1-16P04430 117 aa15.97■□□□□ 0.15
CPNE1-219ENST00000440240 FRMD6-AS1P0C7T7 363 aa15.97■□□□□ 0.15
CPNE1-219ENST00000440240 VEGFCP49767 419 aa15.97■□□□□ 0.15
CPNE1-219ENST00000440240 OVCH2Q7RTZ1 564 aa15.97■□□□□ 0.15
CPNE1-219ENST00000440240 ZNF383Q8NA42 475 aa15.97■□□□□ 0.15
CPNE1-219ENST00000440240 ARHGAP5-AS1Q96IT6 56 aa15.97■□□□□ 0.15
CPNE1-219ENST00000440240 CMSS1Q9BQ75 279 aaKnown RBP15.97■□□□□ 0.15
CPNE1-219ENST00000440240 ZMAT4Q9H898 229 aa15.97■□□□□ 0.15
CPNE1-219ENST00000440240 TRDCB7Z8K6 153 aa15.96■□□□□ 0.15
CPNE1-219ENST00000440240 PSMA1P25786 263 aaKnown RBP15.96■□□□□ 0.15
CPNE1-219ENST00000440240 SERPINB10P48595 397 aa15.96■□□□□ 0.15
CPNE1-219ENST00000440240 TPBGQ13641 420 aa15.96■□□□□ 0.15
CPNE1-219ENST00000440240 IRF3Q14653 427 aa15.96■□□□□ 0.15
CPNE1-219ENST00000440240 FXYD3Q14802 87 aa15.96■□□□□ 0.15
CPNE1-219ENST00000440240 RAB11BQ15907 218 aa15.96■□□□□ 0.15
CPNE1-219ENST00000440240 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.96■□□□□ 0.15
CPNE1-219ENST00000440240 OR56B1Q8NGI3 324 aa15.96■□□□□ 0.15
CPNE1-219ENST00000440240 RANGRFQ9HD47 186 aaPredicted RBP15.96■□□□□ 0.15
CPNE1-219ENST00000440240 ZNF355PQ9NSJ1 428 aa15.96■□□□□ 0.15
CPNE1-219ENST00000440240 TPRKBQ9Y3C4 175 aa15.96■□□□□ 0.15
CPNE1-219ENST00000440240 AK6Q9Y3D8 172 aaKnown RBP15.96■□□□□ 0.15
CPNE1-219ENST00000440240 H3BUA1 57 aa15.95■□□□□ 0.14
CPNE1-219ENST00000440240 CNIH1O95406 144 aa15.95■□□□□ 0.14
CPNE1-219ENST00000440240 LGALS7P47929 136 aa15.95■□□□□ 0.14
CPNE1-219ENST00000440240 PSMD7P51665 324 aa15.95■□□□□ 0.14
CPNE1-219ENST00000440240 TMEM91Q6ZNR0 172 aa15.95■□□□□ 0.14
CPNE1-219ENST00000440240 GFI1Q99684 422 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms