RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 HPSE2Q8WWQ2 592 aa3.98□□□□□ -1.77
EDEM3-203ENST00000439962 FAM168AQ92567 244 aa3.98□□□□□ -1.77
EDEM3-203ENST00000439962 RBMXL1Q96E39 390 aaKnown RBP3.98□□□□□ -1.77
EDEM3-203ENST00000439962 MALSU1Q96EH3 234 aa3.98□□□□□ -1.77
EDEM3-203ENST00000439962 PAPOLGQ9BWT3 736 aaKnown RBP3.98□□□□□ -1.77
EDEM3-203ENST00000439962 YAE1D1Q9NRH1 226 aa3.98□□□□□ -1.77
EDEM3-203ENST00000439962 CBLN4Q9NTU7 201 aa3.98□□□□□ -1.77
EDEM3-203ENST00000439962 GSKIPQ9P0R6 139 aa3.98□□□□□ -1.77
EDEM3-203ENST00000439962 WIPI2Q9Y4P8 454 aa3.98□□□□□ -1.77
EDEM3-203ENST00000439962 DOCK11Q5JSL3 2073 aa3.98□□□□□ -1.77
EDEM3-203ENST00000439962 TENM1Q9UKZ4 2725 aa3.98□□□□□ -1.77
EDEM3-203ENST00000439962 CD300LBA8K4G0 201 aa3.98□□□□□ -1.77
EDEM3-203ENST00000439962 ANGPTL7O43827 346 aa3.98□□□□□ -1.77
EDEM3-203ENST00000439962 LILRA1O75019 489 aa3.98□□□□□ -1.77
EDEM3-203ENST00000439962 TSPAN15O95858 294 aa3.98□□□□□ -1.77
EDEM3-203ENST00000439962 DAOP14920 347 aa3.98□□□□□ -1.77
EDEM3-203ENST00000439962 RAC2P15153 192 aa3.98□□□□□ -1.77
EDEM3-203ENST00000439962 ZNF14P17017 642 aaPredicted RBP3.98□□□□□ -1.77
EDEM3-203ENST00000439962 ADCYAP1P18509 176 aa3.98□□□□□ -1.77
EDEM3-203ENST00000439962 COL8A2P25067 703 aa3.98□□□□□ -1.77
EDEM3-203ENST00000439962 GCH1P30793 250 aa3.98□□□□□ -1.77
EDEM3-203ENST00000439962 GNRHRP30968 328 aa3.98□□□□□ -1.77
EDEM3-203ENST00000439962 IL2RGP31785 369 aa3.98□□□□□ -1.77
EDEM3-203ENST00000439962 WNT5AP41221 380 aa3.98□□□□□ -1.77
EDEM3-203ENST00000439962 LPAR6P43657 344 aa3.98□□□□□ -1.77
EDEM3-203ENST00000439962 NKX2-1P43699 371 aaPredicted RBP3.98□□□□□ -1.77
EDEM3-203ENST00000439962 S100A12P80511 92 aa3.98□□□□□ -1.77
EDEM3-203ENST00000439962 PIGYQ3MUY2 71 aa3.98□□□□□ -1.77
EDEM3-203ENST00000439962 C20orf204Q6ZNR8 217 aa3.98□□□□□ -1.77
EDEM3-203ENST00000439962 Q6ZRG5 221 aa3.98□□□□□ -1.77
EDEM3-203ENST00000439962 RTN4RL2Q86UN3 420 aa3.98□□□□□ -1.77
EDEM3-203ENST00000439962 ZNF695Q8IW36 515 aa3.98□□□□□ -1.77
EDEM3-203ENST00000439962 PSMG3Q9BT73 122 aaPredicted RBP3.98□□□□□ -1.77
EDEM3-203ENST00000439962 OR51I2Q9H344 312 aa3.98□□□□□ -1.77
EDEM3-203ENST00000439962 NCOR1P1Q9H4R4 102 aa3.98□□□□□ -1.77
EDEM3-203ENST00000439962 TREM1Q9NP99 234 aa3.98□□□□□ -1.77
EDEM3-203ENST00000439962 BIN3Q9NQY0 253 aa3.98□□□□□ -1.77
EDEM3-203ENST00000439962 OR2W1Q9Y3N9 320 aa3.98□□□□□ -1.77
EDEM3-203ENST00000439962 CHD3Q12873 2000 aaKnown RBP3.98□□□□□ -1.77
EDEM3-203ENST00000439962 A0A087WWC5 75 aa3.97□□□□□ -1.77
EDEM3-203ENST00000439962 IQCF6A8MYZ5 107 aa3.97□□□□□ -1.77
EDEM3-203ENST00000439962 K7N7A8 449 aa3.97□□□□□ -1.77
EDEM3-203ENST00000439962 PHF1O43189 567 aaPredicted RBP3.97□□□□□ -1.77
EDEM3-203ENST00000439962 TGOLN2O43493 480 aa3.97□□□□□ -1.77
EDEM3-203ENST00000439962 TSPAN9O75954 239 aa3.97□□□□□ -1.77
EDEM3-203ENST00000439962 OR7C1O76099 320 aaPredicted RBP3.97□□□□□ -1.77
EDEM3-203ENST00000439962 TGFAP01135 160 aa3.97□□□□□ -1.77
EDEM3-203ENST00000439962 MUC1P15941 1255 aaPredicted RBP3.97□□□□□ -1.77
EDEM3-203ENST00000439962 PI3P19957 117 aa3.97□□□□□ -1.77
EDEM3-203ENST00000439962 BCL3P20749 454 aa3.97□□□□□ -1.77
EDEM3-203ENST00000439962 NPBWR2P48146 333 aa3.97□□□□□ -1.77
EDEM3-203ENST00000439962 SELENOVP59797 346 aa3.97□□□□□ -1.77
EDEM3-203ENST00000439962 ERVK11-1P61568 191 aa3.97□□□□□ -1.77
EDEM3-203ENST00000439962 EWSR1Q01844 656 aaKnown RBP eCLIP3.97□□□□□ -1.77
EDEM3-203ENST00000439962 ZNF146Q15072 292 aa3.97□□□□□ -1.77
EDEM3-203ENST00000439962 TBC1D26Q86UD7 250 aa3.97□□□□□ -1.77
EDEM3-203ENST00000439962 FAM90A1Q86YD7 464 aa3.97□□□□□ -1.77
EDEM3-203ENST00000439962 CALHM1Q8IU99 346 aa3.97□□□□□ -1.77
EDEM3-203ENST00000439962 KRTAP1-3Q8IUG1 177 aa3.97□□□□□ -1.77
EDEM3-203ENST00000439962 FAM58AQ8N1B3 248 aa3.97□□□□□ -1.77
EDEM3-203ENST00000439962 SLC35G3Q8N808 338 aa3.97□□□□□ -1.77
EDEM3-203ENST00000439962 MRPL30Q8TCC3 161 aaKnown RBP3.97□□□□□ -1.77
EDEM3-203ENST00000439962 TLNRD1Q9H1K6 362 aa3.97□□□□□ -1.77
EDEM3-203ENST00000439962 C19orf12Q9NSK7 152 aa3.97□□□□□ -1.77
EDEM3-203ENST00000439962 MBNL3Q9NUK0 354 aaKnown RBP3.97□□□□□ -1.77
EDEM3-203ENST00000439962 LIN7CQ9NUP9 197 aaKnown RBP3.97□□□□□ -1.77
EDEM3-203ENST00000439962 KIAA1456Q9P272 454 aa3.97□□□□□ -1.77
EDEM3-203ENST00000439962 RCL1Q9Y2P8 373 aaKnown RBP3.97□□□□□ -1.77
EDEM3-203ENST00000439962 UBE2J1Q9Y385 318 aaPredicted RBP3.97□□□□□ -1.77
EDEM3-203ENST00000439962 LSM5Q9Y4Y9 91 aaKnown RBP3.97□□□□□ -1.77
EDEM3-203ENST00000439962 TIMM9Q9Y5J7 89 aa3.97□□□□□ -1.77
EDEM3-203ENST00000439962 WSB1Q9Y6I7 421 aa3.97□□□□□ -1.77
EDEM3-203ENST00000439962 KIAA2026Q5HYC2 2103 aa3.97□□□□□ -1.77
EDEM3-203ENST00000439962 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.97□□□□□ -1.77
EDEM3-203ENST00000439962 CXorf65A6NEN9 183 aa3.97□□□□□ -1.77
EDEM3-203ENST00000439962 FAM90A9PA6NNJ1 464 aa3.97□□□□□ -1.77
EDEM3-203ENST00000439962 B4DEV8 164 aa3.97□□□□□ -1.77
EDEM3-203ENST00000439962 H0YL77 283 aa3.97□□□□□ -1.77
EDEM3-203ENST00000439962 SFTA3P0C7M3 94 aa3.97□□□□□ -1.77
EDEM3-203ENST00000439962 F2RP25116 425 aa3.97□□□□□ -1.77
EDEM3-203ENST00000439962 HAAOP46952 286 aa3.97□□□□□ -1.77
EDEM3-203ENST00000439962 KLF3P57682 345 aaPredicted RBP3.97□□□□□ -1.77
EDEM3-203ENST00000439962 PPP1CBP62140 327 aa3.97□□□□□ -1.77
EDEM3-203ENST00000439962 RPL23AP62750 156 aaKnown RBP3.97□□□□□ -1.77
EDEM3-203ENST00000439962 VAMP2P63027 116 aa3.97□□□□□ -1.77
EDEM3-203ENST00000439962 SSX2Q16385 188 aa3.97□□□□□ -1.77
EDEM3-203ENST00000439962 LYZL2Q7Z4W2 148 aa3.97□□□□□ -1.77
EDEM3-203ENST00000439962 C1QL4Q86Z23 238 aa3.97□□□□□ -1.77
EDEM3-203ENST00000439962 KLF14Q8TD94 323 aaPredicted RBP3.97□□□□□ -1.77
EDEM3-203ENST00000439962 TOMM40LQ969M1 308 aa3.97□□□□□ -1.77
EDEM3-203ENST00000439962 FOXC2Q99958 501 aa3.97□□□□□ -1.77
EDEM3-203ENST00000439962 HDHD3Q9BSH5 251 aaPredicted RBP3.97□□□□□ -1.77
EDEM3-203ENST00000439962 SCRT1Q9BWW7 348 aa3.97□□□□□ -1.77
EDEM3-203ENST00000439962 HES4Q9HCC6 221 aa3.97□□□□□ -1.77
EDEM3-203ENST00000439962 MTCH1Q9NZJ7 389 aa3.97□□□□□ -1.77
EDEM3-203ENST00000439962 PRELID1Q9Y255 219 aa3.97□□□□□ -1.77
EDEM3-203ENST00000439962 ANK3Q12955 4377 aaKnown RBP3.97□□□□□ -1.77
EDEM3-203ENST00000439962 WNK1Q9H4A3 2382 aa3.97□□□□□ -1.77
EDEM3-203ENST00000439962 DNHD1Q96M86 4753 aa3.97□□□□□ -1.77
EDEM3-203ENST00000439962 TRRAPQ9Y4A5 3859 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 147.4 ms