RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 C1QTNF9P0C862 333 aa11.46□□□□□ -0.57
PCNX3-202ENST00000439247 FGF12P61328 243 aa11.46□□□□□ -0.57
PCNX3-202ENST00000439247 C1orf194Q5T5A4 169 aa11.46□□□□□ -0.57
PCNX3-202ENST00000439247 CENPVQ7Z7K6 275 aaPredicted RBP11.46□□□□□ -0.57
PCNX3-202ENST00000439247 RBM7Q9Y580 266 aaKnown RBP11.46□□□□□ -0.57
PCNX3-202ENST00000439247 HBG1P69891 147 aa11.46□□□□□ -0.57
PCNX3-202ENST00000439247 HBG2P69892 147 aa11.46□□□□□ -0.57
PCNX3-202ENST00000439247 MS4A10Q96PG2 267 aa11.46□□□□□ -0.57
PCNX3-202ENST00000439247 CLN8Q9UBY8 286 aa11.46□□□□□ -0.57
PCNX3-202ENST00000439247 KIR2DS1A0A191URI9 304 aa11.46□□□□□ -0.58
PCNX3-202ENST00000439247 NTN3O00634 580 aaPredicted RBP11.46□□□□□ -0.58
PCNX3-202ENST00000439247 GGCTO75223 188 aaKnown RBP11.46□□□□□ -0.58
PCNX3-202ENST00000439247 KIR2DS4P43632 304 aa11.46□□□□□ -0.58
PCNX3-202ENST00000439247 FOXG1P55316 489 aaPredicted RBP11.46□□□□□ -0.58
PCNX3-202ENST00000439247 GTF3C1Q12789 2109 aa11.46□□□□□ -0.58
PCNX3-202ENST00000439247 KIR2DS1Q14954 304 aa11.46□□□□□ -0.58
PCNX3-202ENST00000439247 GCSAMLQ5JQS6 135 aa11.46□□□□□ -0.58
PCNX3-202ENST00000439247 OR10G9Q8NGN4 311 aa11.46□□□□□ -0.58
PCNX3-202ENST00000439247 OR10G7Q8NGN6 311 aa11.46□□□□□ -0.58
PCNX3-202ENST00000439247 ABHD3Q8WU67 409 aa11.46□□□□□ -0.58
PCNX3-202ENST00000439247 DIRC2Q96SL1 478 aa11.46□□□□□ -0.58
PCNX3-202ENST00000439247 IMMP2LQ96T52 175 aa11.46□□□□□ -0.58
PCNX3-202ENST00000439247 LRFN3Q9BTN0 628 aa11.46□□□□□ -0.58
PCNX3-202ENST00000439247 TRAPPC1Q9Y5R8 145 aa11.46□□□□□ -0.58
PCNX3-202ENST00000439247 URB1O60287 2271 aaKnown RBP11.46□□□□□ -0.58
PCNX3-202ENST00000439247 MARCH11A6NNE9 402 aa11.45□□□□□ -0.58
PCNX3-202ENST00000439247 NGFP01138 241 aa11.45□□□□□ -0.58
PCNX3-202ENST00000439247 CCL4P13236 92 aa11.45□□□□□ -0.58
PCNX3-202ENST00000439247 SELEP16581 610 aa11.45□□□□□ -0.58
PCNX3-202ENST00000439247 Q6ZS49 121 aa11.45□□□□□ -0.58
PCNX3-202ENST00000439247 TRAV24A0A0B4J272 114 aa11.45□□□□□ -0.58
PCNX3-202ENST00000439247 HPRT1P00492 218 aa11.45□□□□□ -0.58
PCNX3-202ENST00000439247 TFPI2P48307 235 aa11.45□□□□□ -0.58
PCNX3-202ENST00000439247 KRTAP27-1Q3LI81 207 aa11.45□□□□□ -0.58
PCNX3-202ENST00000439247 CARFQ8N187 725 aa11.45□□□□□ -0.58
PCNX3-202ENST00000439247 MANBALQ9NQG1 85 aa11.45□□□□□ -0.58
PCNX3-202ENST00000439247 RNF150Q9ULK6 438 aa11.45□□□□□ -0.58
PCNX3-202ENST00000439247 PPIAL4AQ9Y536 164 aa11.45□□□□□ -0.58
PCNX3-202ENST00000439247 PRRC2CQ9Y520 2896 aaKnown RBP11.45□□□□□ -0.58
PCNX3-202ENST00000439247 TMEM210A6NLX4 147 aa11.44□□□□□ -0.58
PCNX3-202ENST00000439247 ZNF716A6NP11 495 aa11.44□□□□□ -0.58
PCNX3-202ENST00000439247 TRAPPC2LH3BP13 241 aa11.44□□□□□ -0.58
PCNX3-202ENST00000439247 DSCR4P56555 118 aaPredicted RBP11.44□□□□□ -0.58
PCNX3-202ENST00000439247 CLDN15P56746 228 aa11.44□□□□□ -0.58
PCNX3-202ENST00000439247 FFAR4Q5NUL3 377 aa11.44□□□□□ -0.58
PCNX3-202ENST00000439247 TOMM20LQ6UXN7 152 aa11.44□□□□□ -0.58
PCNX3-202ENST00000439247 KMT5CQ86Y97 462 aa11.44□□□□□ -0.58
PCNX3-202ENST00000439247 MED12LQ86YW9 2145 aa11.44□□□□□ -0.58
PCNX3-202ENST00000439247 OR1L1Q8NH94 360 aa11.44□□□□□ -0.58
PCNX3-202ENST00000439247 PAM16Q9Y3D7 125 aa11.44□□□□□ -0.58
PCNX3-202ENST00000439247 GOLT1BQ9Y3E0 138 aa11.44□□□□□ -0.58
PCNX3-202ENST00000439247 KIR2DL5BA0A0G2JN68 375 aa11.44□□□□□ -0.58
PCNX3-202ENST00000439247 KIR2DL5BA0A0G2JPC4 375 aa11.44□□□□□ -0.58
PCNX3-202ENST00000439247 ZNF503-AS2A6NEH8 195 aa11.44□□□□□ -0.58
PCNX3-202ENST00000439247 RAMP3O60896 148 aa11.44□□□□□ -0.58
PCNX3-202ENST00000439247 RFPL3SP0C7P2 107 aa11.44□□□□□ -0.58
PCNX3-202ENST00000439247 ZNF883P0CG24 379 aa11.44□□□□□ -0.58
PCNX3-202ENST00000439247 CDKN1AP38936 164 aa11.44□□□□□ -0.58
PCNX3-202ENST00000439247 OR3A1P47881 315 aa11.44□□□□□ -0.58
PCNX3-202ENST00000439247 ATP5G3P48201 142 aa11.44□□□□□ -0.58
PCNX3-202ENST00000439247 CARD18P57730 90 aa11.44□□□□□ -0.58
PCNX3-202ENST00000439247 RPL15P61313 204 aaKnown RBP11.44□□□□□ -0.58
PCNX3-202ENST00000439247 ACOT6Q3I5F7 207 aaPredicted RBP11.44□□□□□ -0.58
PCNX3-202ENST00000439247 KIR2DL5AQ8N109 375 aa11.44□□□□□ -0.58
PCNX3-202ENST00000439247 PSMF1Q92530 271 aa11.44□□□□□ -0.58
PCNX3-202ENST00000439247 ZDHHC16Q969W1 377 aa11.44□□□□□ -0.58
PCNX3-202ENST00000439247 PINX1Q96BK5 328 aaKnown RBP11.44□□□□□ -0.58
PCNX3-202ENST00000439247 PRRG4Q9BZD6 226 aa11.44□□□□□ -0.58
PCNX3-202ENST00000439247 MSL2Q9HCI7 577 aa11.44□□□□□ -0.58
PCNX3-202ENST00000439247 C5orf49A4QMS7 147 aa11.44□□□□□ -0.58
PCNX3-202ENST00000439247 DLEU1O43261 78 aa11.44□□□□□ -0.58
PCNX3-202ENST00000439247 RHBDL1O75783 438 aa11.44□□□□□ -0.58
PCNX3-202ENST00000439247 KRASP01116 189 aa11.44□□□□□ -0.58
PCNX3-202ENST00000439247 CCKARP32238 428 aa11.44□□□□□ -0.58
PCNX3-202ENST00000439247 ADMP35318 185 aa11.44□□□□□ -0.58
PCNX3-202ENST00000439247 DUSP3P51452 185 aaPredicted RBP11.44□□□□□ -0.58
PCNX3-202ENST00000439247 LINC00205P59089 165 aa11.44□□□□□ -0.58
PCNX3-202ENST00000439247 PCOLCEQ15113 449 aa11.44□□□□□ -0.58
PCNX3-202ENST00000439247 CISD2Q8N5K1 135 aaKnown RBP11.44□□□□□ -0.58
PCNX3-202ENST00000439247 CPT1CQ8TCG5 803 aa11.44□□□□□ -0.58
PCNX3-202ENST00000439247 GPR35Q9HC97 309 aa11.44□□□□□ -0.58
PCNX3-202ENST00000439247 ZFHX4Q86UP3 3567 aa11.43□□□□□ -0.58
PCNX3-202ENST00000439247 TOX3O15405 576 aaPredicted RBP11.43□□□□□ -0.58
PCNX3-202ENST00000439247 FRMD6-AS1P0C7T7 363 aa11.43□□□□□ -0.58
PCNX3-202ENST00000439247 SFTPCP11686 197 aa11.43□□□□□ -0.58
PCNX3-202ENST00000439247 ACP1P24666 158 aa11.43□□□□□ -0.58
PCNX3-202ENST00000439247 RAC1P63000 192 aa11.43□□□□□ -0.58
PCNX3-202ENST00000439247 RARRES3Q9UL19 164 aa11.43□□□□□ -0.58
PCNX3-202ENST00000439247 C11orf94C9JXX5 98 aa11.43□□□□□ -0.58
PCNX3-202ENST00000439247 F2Z2F3 143 aa11.43□□□□□ -0.58
PCNX3-202ENST00000439247 TMEM250H0YL14 139 aa11.43□□□□□ -0.58
PCNX3-202ENST00000439247 G6PCP35575 357 aa11.43□□□□□ -0.58
PCNX3-202ENST00000439247 HOXA4Q00056 320 aaPredicted RBP11.43□□□□□ -0.58
PCNX3-202ENST00000439247 Q6ZWC4 215 aa11.43□□□□□ -0.58
PCNX3-202ENST00000439247 FGFRL1Q8N441 504 aa11.43□□□□□ -0.58
PCNX3-202ENST00000439247 CFAP47Q6ZTR5 3102 aa11.43□□□□□ -0.58
PCNX3-202ENST00000439247 RBFOX2O43251 390 aaKnown RBP eCLIP11.42□□□□□ -0.58
PCNX3-202ENST00000439247 NDUFB4O95168 129 aa11.42□□□□□ -0.58
PCNX3-202ENST00000439247 S100GP29377 79 aa11.42□□□□□ -0.58
PCNX3-202ENST00000439247 GNB1P62873 340 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms